ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart44h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187664.1| Oryza sativa (japonica cultivar-group), predic... 246 6e-62
2dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 6e-62
3gb|AY108960.1| Zea mays PCO105999 mRNA sequence 224 2e-55
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 163 7e-37
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 7e-37
6gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 163 7e-37
7ref|XM_479184.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
8ref|XM_506479.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 4e-04
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
10dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
11dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
12dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
13ref|XM_450931.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.027
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
15dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
16dbj|AK102696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.027
17ref|NM_001036493.1| Arabidopsis thaliana unknown protein AT4G016... 46 0.11
18ref|NM_116391.2| Arabidopsis thaliana unknown protein AT4G01600 ... 46 0.11
19gb|BT015662.1| Arabidopsis thaliana At4g01600 gene, complete cds 46 0.11
20gb|BT015153.1| Arabidopsis thaliana At4g01600 gene, complete cds 46 0.11
21emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c... 46 0.11
22gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosom... 46 0.11
23emb|BX828805.1|CNS0A2AG Arabidopsis thaliana Full-length cDNA Co... 46 0.11
24gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 46 0.11
25ref|NM_201781.1| Arabidopsis thaliana unknown protein AT2G22475 ... 42 1.6
26ref|NM_127813.2| Arabidopsis thaliana unknown protein AT2G22475 ... 42 1.6
27gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence 42 1.6
28gb|AC115145.5| Rattus norvegicus 1 BAC CH230-201L12 (Children's ... 42 1.6
29ref|XM_365412.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.6
30gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 ma... 42 1.6
31emb|BX819558.1|CNS0A90C Arabidopsis thaliana Full-length cDNA Co... 42 1.6
32gb|AY087182.1| Arabidopsis thaliana clone 32573 mRNA, complete s... 42 1.6
33dbj|AK118552.1| Arabidopsis thaliana At2g22475 mRNA for unknown ... 42 1.6
34gb|AY775040.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited prot... 40 6.5
35gb|BC052880.1| Mus musculus solute carrier family 39 (zinc trans... 40 6.5
36gb|BT018477.1| Zea mays clone EL01N0423H08.d mRNA sequence 40 6.5
37gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, comp... 40 6.5
38gb|BC059214.1| Mus musculus solute carrier family 39 (zinc trans... 40 6.5
39emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chr... 40 6.5
40emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chr... 40 6.5
41gb|AC040934.15| Homo sapiens chromosome 17, clone CTD-2026D20, c... 40 6.5
42gb|BC062918.1| Mus musculus solute carrier family 39 (zinc trans... 40 6.5
43dbj|AK136117.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 6.5
44gb|AC068234.8| Homo sapiens chromosome 17, clone RP11-290H9, com... 40 6.5
45dbj|AK049099.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 6.5
46emb|BX842103.1|CNS09Y93 Arabidopsis thaliana Full-length cDNA Co... 40 6.5
47ref|NM_172653.2| Mus musculus solute carrier family 39 (zinc tra... 40 6.5
48dbj|AK122483.1| Mus musculus mRNA for mKIAA1265 protein 40 6.5
49dbj|AP004475.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.5 
>ref|NM_187664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score =  246 bits (124), Expect = 6e-62
 Identities = 241/280 (86%)
 Strand = Plus / Minus

                                                                       
Query: 202 gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 261
           |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 776 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 717

                                                                       
Query: 262 aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 321
           ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 716 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 657

                                                                       
Query: 322 ctgctcgttgaaggattaactgacctcagctgggctagcgggatggcaaccttgtaatag 381
           ||||||||||||||||| ||||| ||||| ||||   | || ||| ||||||| || |||
Sbjct: 656 ctgctcgttgaaggattcactgatctcagttgggtgtggggaatgacaaccttatagtag 597

                                                                       
Query: 382 ctccactcatttttatccccaaccttgtaggcaagtgggttatcactgcagaaggccaac 441
           |||||||||| ||| || ||||||||||| |||||||| ||||| || ||||| |||| |
Sbjct: 596 ctccactcatctttgtctccaaccttgtaagcaagtggattatcgctacagaatgccagc 537

                                                   
Query: 442 tttacattggacaggtagagcacacccataacaggaccag 481
           |||  |||||||||||| ||||||||||| ||||||||||
Sbjct: 536 tttttattggacaggtatagcacacccatgacaggaccag 497
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>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full
           insert sequence
          Length = 1136

 Score =  246 bits (124), Expect = 6e-62
 Identities = 241/280 (86%)
 Strand = Plus / Minus

                                                                       
Query: 202 gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 261
           |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 927 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 868

                                                                       
Query: 262 aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 321
           ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 867 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 808

                                                                       
Query: 322 ctgctcgttgaaggattaactgacctcagctgggctagcgggatggcaaccttgtaatag 381
           ||||||||||||||||| ||||| ||||| ||||   | || ||| ||||||| || |||
Sbjct: 807 ctgctcgttgaaggattcactgatctcagttgggtgtggggaatgacaaccttatagtag 748

                                                                       
Query: 382 ctccactcatttttatccccaaccttgtaggcaagtgggttatcactgcagaaggccaac 441
           |||||||||| ||| || ||||||||||| |||||||| ||||| || ||||| |||| |
Sbjct: 747 ctccactcatctttgtctccaaccttgtaagcaagtggattatcgctacagaatgccagc 688

                                                   
Query: 442 tttacattggacaggtagagcacacccataacaggaccag 481
           |||  |||||||||||| ||||||||||| ||||||||||
Sbjct: 687 tttttattggacaggtatagcacacccatgacaggaccag 648
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>gb|AY108960.1| Zea mays PCO105999 mRNA sequence
          Length = 1111

 Score =  224 bits (113), Expect = 2e-55
 Identities = 294/353 (83%), Gaps = 1/353 (0%)
 Strand = Plus / Minus

                                                                       
Query: 130 agtataccacaactgta-tgtataatgcatgctagtccaaacctatagacatcactaagc 188
           |||||| |||||||||| |||||||  ||||||||| | || | ||  ||||||||||||
Sbjct: 937 agtatatcacaactgtaatgtataagacatgctagttccaatccatgaacatcactaagc 878

                                                                       
Query: 189 ttgcaaaatacgggcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagta 248
             | ||| |  | |||||||| |||||||||||||| | ||| || ||| |||| |||||
Sbjct: 877 acgtaaattctgagcctcctgaagtgcttcctgcagattcttcaccgcactgtcatagta 818

                                                                       
Query: 249 cacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 308
            || |||||||| ||||||||||| || ||||| ||||| |||||||| |||||||||||
Sbjct: 817 aacgaagcccataaaccaaaactcatggttatcaacagaaaccacctgaatgtatttctc 758

                                                                       
Query: 309 agctgcgtttgttctgctcgttgaaggattaactgacctcagctgggctagcgggatggc 368
            ||||| ||||||||||| ||||| | ||||| ||| | ||| || || || |||||| |
Sbjct: 757 tgctgcatttgttctgcttgttgatgaattaattgatcgcagttgagcaagggggatgac 698

                                                                       
Query: 369 aaccttgtaatagctccactcatttttatccccaaccttgtaggcaagtgggttatcact 428
            |||||||| || ||||||||| |||| || ||||||| ||| |||||||||||||||||
Sbjct: 697 caccttgtagtaactccactcagttttgtctccaacctggtatgcaagtgggttatcact 638

                                                                
Query: 429 gcagaaggccaactttacattggacaggtagagcacacccataacaggaccag 481
            || || ||||  ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 637 acaaaatgccagttttacattggacaggtaaagcacacccataacaggaccag 585
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  163 bits (82), Expect = 7e-37
 Identities = 136/154 (88%)
 Strand = Plus / Minus

                                                                           
Query: 202     gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 261
               |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 4576261 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 4576202

                                                                           
Query: 262     aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 321
               ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 4576201 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 4576142

                                                 
Query: 322     ctgctcgttgaaggattaactgacctcagctggg 355
               ||||||||||||||||| ||||| ||||| ||||
Sbjct: 4576141 ctgctcgttgaaggattcactgatctcagttggg 4576108



 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                           
Query: 370     accttgtaatagctccactcatttttatccccaaccttgtaggcaagtgggttatcactg 429
               ||||| || ||||||||||||| ||| || ||||||||||| |||||||| ||||| || 
Sbjct: 4575795 accttatagtagctccactcatctttgtctccaaccttgtaagcaagtggattatcgcta 4575736

                                                                   
Query: 430     cagaaggccaactttacattggacaggtagagcacacccataacaggaccag 481
               ||||| |||| ||||  |||||||||||| ||||||||||| ||||||||||
Sbjct: 4575735 cagaatgccagctttttattggacaggtatagcacacccatgacaggaccag 4575684
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  163 bits (82), Expect = 7e-37
 Identities = 136/154 (88%)
 Strand = Plus / Minus

                                                                           
Query: 202     gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 261
               |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 4576376 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 4576317

                                                                           
Query: 262     aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 321
               ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 4576316 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 4576257

                                                 
Query: 322     ctgctcgttgaaggattaactgacctcagctggg 355
               ||||||||||||||||| ||||| ||||| ||||
Sbjct: 4576256 ctgctcgttgaaggattcactgatctcagttggg 4576223



 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                           
Query: 370     accttgtaatagctccactcatttttatccccaaccttgtaggcaagtgggttatcactg 429
               ||||| || ||||||||||||| ||| || ||||||||||| |||||||| ||||| || 
Sbjct: 4575910 accttatagtagctccactcatctttgtctccaaccttgtaagcaagtggattatcgcta 4575851

                                                                   
Query: 430     cagaaggccaactttacattggacaggtagagcacacccataacaggaccag 481
               ||||| |||| ||||  |||||||||||| ||||||||||| ||||||||||
Sbjct: 4575850 cagaatgccagctttttattggacaggtatagcacacccatgacaggaccag 4575799
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>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
             complete sequence
          Length = 148894

 Score =  163 bits (82), Expect = 7e-37
 Identities = 136/154 (88%)
 Strand = Plus / Minus

                                                                         
Query: 202   gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 261
             |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 17216 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 17157

                                                                         
Query: 262   aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 321
             ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 17156 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 17097

                                               
Query: 322   ctgctcgttgaaggattaactgacctcagctggg 355
             ||||||||||||||||| ||||| ||||| ||||
Sbjct: 17096 ctgctcgttgaaggattcactgatctcagttggg 17063



 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                         
Query: 370   accttgtaatagctccactcatttttatccccaaccttgtaggcaagtgggttatcactg 429
             ||||| || ||||||||||||| ||| || ||||||||||| |||||||| ||||| || 
Sbjct: 16750 accttatagtagctccactcatctttgtctccaaccttgtaagcaagtggattatcgcta 16691

                                                                 
Query: 430   cagaaggccaactttacattggacaggtagagcacacccataacaggaccag 481
             ||||| |||| ||||  |||||||||||| ||||||||||| ||||||||||
Sbjct: 16690 cagaatgccagctttttattggacaggtatagcacacccatgacaggaccag 16639
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>ref|XM_479184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1000

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 299
           ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 690 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 631

              
Query: 300 gta 302
           |||
Sbjct: 630 gta 628
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>ref|XM_506479.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.123 mRNA
          Length = 1055

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 299
           ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 746 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 687

              
Query: 300 gta 302
           |||
Sbjct: 686 gta 684
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                            
Query: 240      gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 299
                ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 25625913 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 25625854

                   
Query: 300      gta 302
                |||
Sbjct: 25625853 gta 25625851
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>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0594D10
          Length = 143200

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 240   gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 299
             ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 79886 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 79827

                
Query: 300   gta 302
             |||
Sbjct: 79826 gta 79824
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>dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100G12, full
           insert sequence
          Length = 1055

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 299
           ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 746 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 687

              
Query: 300 gta 302
           |||
Sbjct: 686 gta 684
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>dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E06, full
           insert sequence
          Length = 1000

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 240 gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 299
           ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 690 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 631

              
Query: 300 gta 302
           |||
Sbjct: 630 gta 628
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>ref|XM_450931.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1017

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 217 tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaaccaaaactc 272
           ||||||| |||||| || ||  ||||||||| |||||||||||| ||||| |||||
Sbjct: 674 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaaccagaactc 619
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 217      tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaaccaaaactc 272
                ||||||| |||||| || ||  ||||||||| |||||||||||| ||||| |||||
Sbjct: 17640492 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaaccagaactc 17640437
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>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1005_D12
          Length = 150588

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 217   tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaaccaaaactc 272
             ||||||| |||||| || ||  ||||||||| |||||||||||| ||||| |||||
Sbjct: 89214 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaaccagaactc 89159
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>dbj|AK102696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103F22, full
           insert sequence
          Length = 1016

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 217 tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaaccaaaactc 272
           ||||||| |||||| || ||  ||||||||| |||||||||||| ||||| |||||
Sbjct: 674 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaaccagaactc 619
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>ref|NM_001036493.1| Arabidopsis thaliana unknown protein AT4G01600 transcript variant
           AT4G01600.2 mRNA, complete cds
          Length = 704

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 250 acaaagcccatgaaccaaaactc 272
           |||||||||||||||||||||||
Sbjct: 619 acaaagcccatgaaccaaaactc 597
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>ref|NM_116391.2| Arabidopsis thaliana unknown protein AT4G01600 transcript variant
           AT4G01600.1 mRNA, complete cds
          Length = 731

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 250 acaaagcccatgaaccaaaactc 272
           |||||||||||||||||||||||
Sbjct: 642 acaaagcccatgaaccaaaactc 620
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>gb|BT015662.1| Arabidopsis thaliana At4g01600 gene, complete cds
          Length = 687

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 250 acaaagcccatgaaccaaaactc 272
           |||||||||||||||||||||||
Sbjct: 617 acaaagcccatgaaccaaaactc 595
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>gb|BT015153.1| Arabidopsis thaliana At4g01600 gene, complete cds
          Length = 704

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 250 acaaagcccatgaaccaaaactc 272
           |||||||||||||||||||||||
Sbjct: 619 acaaagcccatgaaccaaaactc 597
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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 250    acaaagcccatgaaccaaaactc 272
              |||||||||||||||||||||||
Sbjct: 116814 acaaagcccatgaaccaaaactc 116792
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>gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosome 14, complete
             sequence
          Length = 151445

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 200   gggcctcctggagtgcttcctgc 222
             |||||||||||||||||||||||
Sbjct: 52270 gggcctcctggagtgcttcctgc 52248
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>emb|BX828805.1|CNS0A2AG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL40ZA05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 724

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 250 acaaagcccatgaaccaaaactc 272
           |||||||||||||||||||||||
Sbjct: 635 acaaagcccatgaaccaaaactc 613
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>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16
          Length = 90596

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 250   acaaagcccatgaaccaaaactc 272
             |||||||||||||||||||||||
Sbjct: 77159 acaaagcccatgaaccaaaactc 77181
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>ref|NM_201781.1| Arabidopsis thaliana unknown protein AT2G22475 transcript variant
            AT2G22475.2 mRNA, complete cds
          Length = 1636

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 256  cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 308
            ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 1332 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 1280
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>ref|NM_127813.2| Arabidopsis thaliana unknown protein AT2G22475 transcript variant
           AT2G22475.1 mRNA, complete cds
          Length = 1254

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 256 cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 308
           ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 949 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 897
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>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 241   tcgtagtacacaaagcccatgaaccaaaactcgtgattatc 281
             ||||||| ||| || ||||||||||| |||||||| |||||
Sbjct: 77005 tcgtagttcacgaaccccatgaaccagaactcgtggttatc 76965
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>gb|AC115145.5| Rattus norvegicus 1 BAC CH230-201L12 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 129506

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 439    aactttacattggacaggtag 459
              |||||||||||||||||||||
Sbjct: 119885 aactttacattggacaggtag 119865
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>ref|XM_365412.1| Magnaporthe grisea 70-15 hypothetical protein (MG02114.4) partial
            mRNA
          Length = 2439

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 364  atggcaaccttgtaatagctc 384
            |||||||||||||||||||||
Sbjct: 2195 atggcaaccttgtaatagctc 2175
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>gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 map mi238, complete
             sequence
          Length = 106949

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 256   cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 308
             ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 49581 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 49633
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>emb|BX819558.1|CNS0A90C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB8ZE09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1500

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 256  cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 308
            ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 1262 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 1210
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>gb|AY087182.1| Arabidopsis thaliana clone 32573 mRNA, complete sequence
          Length = 1216

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 256 cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 308
           ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 941 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 889
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>dbj|AK118552.1| Arabidopsis thaliana At2g22475 mRNA for unknown protein, complete
           cds, clone: RAFL19-77-O17
          Length = 1217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 256 cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 308
           ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 949 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 897
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>gb|AY775040.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 140 (ACRE140)
           mRNA, partial cds
          Length = 518

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 acaaagcccatgaaccaaaa 269
           ||||||||||||||||||||
Sbjct: 345 acaaagcccatgaaccaaaa 326
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>gb|BC052880.1| Mus musculus solute carrier family 39 (zinc transporter), member 10,
            mRNA (cDNA clone MGC:60701 IMAGE:30045566), complete cds
          Length = 3079

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   gatagatatgatgccacaga 35
            ||||||||||||||||||||
Sbjct: 1412 gatagatatgatgccacaga 1393
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>gb|BT018477.1| Zea mays clone EL01N0423H08.d mRNA sequence
          Length = 968

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 238 ttgtcgtagtacacaaagcccatgaaccaaaactcgtgattatc 281
           |||||||||| ||| || ||||||||||| |||| ||| |||||
Sbjct: 686 ttgtcgtagttcacgaaccccatgaaccagaactggtggttatc 643
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>gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, complete sequence
          Length = 171792

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     gatagatatgatgccacaga 35
              ||||||||||||||||||||
Sbjct: 103260 gatagatatgatgccacaga 103279
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>gb|BC059214.1| Mus musculus solute carrier family 39 (zinc transporter), member
           10, mRNA (cDNA clone IMAGE:6417451), complete cds
          Length = 3865

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  gatagatatgatgccacaga 35
           ||||||||||||||||||||
Sbjct: 182 gatagatatgatgccacaga 163
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>emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chromosome 10 Contains the
              5' end of a novel gene, complete sequence
          Length = 152898

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    acatgtaaagtataccacaa 141
              ||||||||||||||||||||
Sbjct: 140472 acatgtaaagtataccacaa 140453
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>emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chromosome 1p32.3-34.1
             Contains the MYCBP gene for c-myc binding protein, the
             GJA10 gene for gap junction protein alpha 10, the RHBDL2
             gene for rhomboid veinlet-like 2 (Drosophila), a novel
             gene and the RRAGC gene for Ras-related GTP binding C,
             complete sequence
          Length = 155138

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   tggagtgcttcctgcaggtg 227
             ||||||||||||||||||||
Sbjct: 54441 tggagtgcttcctgcaggtg 54422
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>gb|AC040934.15| Homo sapiens chromosome 17, clone CTD-2026D20, complete sequence
          Length = 168194

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   gcccatgaaccaaaactcgt 274
             ||||||||||||||||||||
Sbjct: 13704 gcccatgaaccaaaactcgt 13685
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>gb|BC062918.1| Mus musculus solute carrier family 39 (zinc transporter), member 10,
            mRNA (cDNA clone MGC:65685 IMAGE:6833098), complete cds
          Length = 5003

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   gatagatatgatgccacaga 35
            ||||||||||||||||||||
Sbjct: 1298 gatagatatgatgccacaga 1279
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>dbj|AK136117.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420458L22 product:solute carrier
            family 39 (zinc transporter), member 10, full insert
            sequence
          Length = 2375

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   gatagatatgatgccacaga 35
            ||||||||||||||||||||
Sbjct: 1010 gatagatatgatgccacaga 991
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>gb|AC068234.8| Homo sapiens chromosome 17, clone RP11-290H9, complete sequence
          Length = 174566

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   gcccatgaaccaaaactcgt 274
             ||||||||||||||||||||
Sbjct: 50846 gcccatgaaccaaaactcgt 50865
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>dbj|AK049099.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
          enriched library, clone:C230098N10 product:weakly
          similar to CDNA FLJ32338 FIS, CLONE PROST2005919,
          MODERATELY SIMILAR TO HUMAN BREAST CANCER, ESTROGEN
          REGULATED LIV-1 PROTEIN (LIV-1) MRNA [Homo sapiens],
          full insert sequence
          Length = 3706

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 16 gatagatatgatgccacaga 35
          ||||||||||||||||||||
Sbjct: 44 gatagatatgatgccacaga 25
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>emb|BX842103.1|CNS09Y93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL9ZA03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1056

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 cccatgaaccaaaactcgtgattatcgacaga 287
           ||||||||||||||||| ||||| || |||||
Sbjct: 935 cccatgaaccaaaactcatgattgtctacaga 904
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>ref|NM_172653.2| Mus musculus solute carrier family 39 (zinc transporter), member 10
            (Slc39a10), mRNA
          Length = 5003

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   gatagatatgatgccacaga 35
            ||||||||||||||||||||
Sbjct: 1298 gatagatatgatgccacaga 1279
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>dbj|AK122483.1| Mus musculus mRNA for mKIAA1265 protein
          Length = 4395

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  gatagatatgatgccacaga 35
           ||||||||||||||||||||
Sbjct: 732 gatagatatgatgccacaga 713
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>dbj|AP004475.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT01I13, TM0010,
             complete sequence
          Length = 87900

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   acaaagcccatgaaccaaaa 269
             ||||||||||||||||||||
Sbjct: 78090 acaaagcccatgaaccaaaa 78071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,492,785
Number of Sequences: 3902068
Number of extensions: 3492785
Number of successful extensions: 59998
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59862
Number of HSP's gapped (non-prelim): 134
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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