Clone Name | rbart44h05 |
---|---|
Clone Library Name | barley_pub |
>TIP32_ORYSA (Q7XKI5) Probable aquaporin TIP3.2 (Tonoplast intrinsic protein| 3.2) (OsTIP3.2) Length = 265 Score = 32.0 bits (71), Expect = 0.78 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -1 Query: 362 LAGWDWKRHWGCWLGRTI 309 L GW+W+ HW WLG I Sbjct: 214 LVGWNWRHHWVYWLGPLI 231
>TRMD_THEMA (Q9X1Q5) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 245 Score = 30.4 bits (67), Expect = 2.3 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%) Frame = -2 Query: 448 GSMPAMLVLAGVIFLLGGIVEELPLTTESWLXXXXXXXXXXXXXGPFS----RFVGVVLC 281 G +PAM++ V+ L+ G+VE + ES+ P+ + V+L Sbjct: 139 GELPAMVITDAVVRLVPGVVERESVERESF---HQGLLDHPVYTRPYEYKGMKVPDVLLS 195 Query: 280 GSG*KL-CYRRRSMPKTTMVSVDDVFLLKDIFE 185 G K+ +RR+ K T+ D+FL K++ E Sbjct: 196 GDHEKVELWRRKESIKKTLAKRPDLFLAKELDE 228
>TIP31_ORYSA (Q9FWV6) Probable aquaporin TIP3.1 (Tonoplast intrinsic protein| 3.1) (OsTIP3.1) Length = 264 Score = 30.4 bits (67), Expect = 2.3 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 Query: 362 LAGWDWKRHWGCWLG 318 L GW W+ HW WLG Sbjct: 213 LVGWRWRHHWVYWLG 227
>STTP1_HUMAN (Q6IA86) Stat3-interacting protein (StIP1) (SHINC-2)| Length = 826 Score = 29.3 bits (64), Expect = 5.0 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = -1 Query: 350 DWKR--HWGCWLGRTILKVRWS--CLVRIWVKALLSTEVDAEDNDGV 222 DW R W + GR + S CL+RIW + ST ++ +D+D + Sbjct: 208 DWIRGVEWAAF-GRDLFLASCSQDCLIRIWKLYIKSTSLETQDDDNI 253
>SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (Protein enhancer| of yellow 3) Length = 2006 Score = 29.3 bits (64), Expect = 5.0 Identities = 26/127 (20%), Positives = 46/127 (36%) Frame = +1 Query: 64 EENQAENHITRNK*RKNHRYNTNIPPPPMTTCVQNNSEQDLQRCL*EGKHHQLTPSLSSA 243 ++N ENH+ R N ++ +PP + ++Q Q C + + SL + Sbjct: 746 QDNNNENHLKRTNSEGNESPSSRLPPSKQRRLDNDENDQQTQNC--HDPARKCSESLQAL 803 Query: 244 STSVDNKAFTQIXXXXXXXXXXMVRPSQQPQCRFQSQPARTRW*EAALLQCLQGEK*RPQ 423 S ++ + P+QQ Q AL ++GE + Q Sbjct: 804 PPSHRSRKQKHERILNTDLEGSLFPPTQQQSISTPDQ-------NGALSSEVEGEDAKAQ 856 Query: 424 APTLPAS 444 P PA+ Sbjct: 857 DPLEPAT 863
>TIPA_PHAVU (P23958) Probable aquaporin TIP-type alpha (Tonoplast intrinsic| protein alpha) (Alpha TIP) Length = 256 Score = 28.9 bits (63), Expect = 6.6 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = -1 Query: 362 LAGWDWKRHWGCWLG 318 L GW W +HW W+G Sbjct: 208 LVGWQWHQHWIFWVG 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,864,870 Number of Sequences: 219361 Number of extensions: 1214043 Number of successful extensions: 2873 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2811 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2872 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)