>gb|AF078801.1|AF078801 Hordeum vulgare degenerate retrotransposon cereba polyprotein
            pseudogene, partial sequence
          Length = 15230

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                        
Query: 52   aaagtggacttagcctggttgttggacacaaataaagtacacgaagttacaatgactaac 111
            ||||||| ||||| ||||| ||||||||||||  |||||||||||||| ||||| |||||
Sbjct: 7785 aaagtggtcttagtctggtcgttggacacaaacgaagtacacgaagttgcaatggctaac 7844

                              
Query: 112  tttcaactgaacaaatcc 129
            ||| |||| |||||||||
Sbjct: 7845 ttttaactaaacaaatcc 7862



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 3    aatctgaatattacgaatatagatgga 29
            |||||||||||| ||||||||||||||
Sbjct: 2035 aatctgaatattgcgaatatagatgga 2061

>gb|AF431735.1| Leymus racemosus high-molecular-weight glutenin subunit 1Ax-like gene
            sequence
          Length = 2687

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 3    aatctgaatattacgaatatagatggagtattgataagggtggg 46
            |||||||||||| |||||||||||| |||||||||||| |||||
Sbjct: 2151 aatctgaatattgcgaatatagatgaagtattgataagtgtggg 2108

>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic
            nucleotide-gated ion channel 1 (CNGC1) gene, partial cds
          Length = 5200

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 3    aatctgaatattacgaatatagatggagtattgataagggtggg 46
            |||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 5152 aatctgaatattgcaaatatagatgaagtattgataagggtggg 5195

>gb|U49362.1|PJU49362 Psathyrostachys juncea Ns genome RAPD marker DNA sequence
          Length = 508

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 3   aatctgaatattacgaatatagatggagtattgataa 39
           |||||||||||| |||||||||||| ||| |||||||
Sbjct: 451 aatctgaatattgcgaatatagatgaagtnttgataa 415

>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete
             sequence
          Length = 109794

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 130   caagtctaaaccctaatttaggcta 154
             |||||||||||||||| ||||||||
Sbjct: 19793 caagtctaaaccctaaattaggcta 19769

>gb|AC154334.2| Mus musculus BAC clone RP24-497L7 from chromosome 14, complete sequence
          Length = 127819

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 116   aactgaacaaatcccaagtctaaac 140
             ||||||||||| |||||||||||||
Sbjct: 32253 aactgaacaaagcccaagtctaaac 32229

>gb|AC119039.2| Homo sapiens 3 BAC RP11-735B13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 100405

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gttacttctcttattaatcc 325
             ||||||||||||||||||||
Sbjct: 25007 gttacttctcttattaatcc 24988

>gb|BC042928.1| Xenopus laevis similar to myozenin 1, mRNA (cDNA clone MGC:53296
            IMAGE:5570393), complete cds
          Length = 1664

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 104  tgactaactttcaactgaacaaat 127
            |||||||||||||| |||||||||
Sbjct: 1462 tgactaactttcaaatgaacaaat 1439

>gb|AC139190.1| Pan troglodytes BAC clone RP43-12I19 from Y, complete sequence
          Length = 159298

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tttaggctagctatttatta 165
             ||||||||||||||||||||
Sbjct: 13566 tttaggctagctatttatta 13585

>emb|AL360172.17| Human DNA sequence from clone RP11-402D22 on chromosome 10 Contains the
              5' end of the variant of a novel gene, complete sequence
          Length = 188937

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ggtgggatatgaaagtggac 60
              ||||||||||||||||||||
Sbjct: 115745 ggtgggatatgaaagtggac 115726

>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 149    aggctagctatttattaagagcta 172
              ||||||||| ||||||||||||||
Sbjct: 213059 aggctagctctttattaagagcta 213082

>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
             complete sequence
          Length = 145070

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   atcccaagtctaaaccctaattta 149
             ||||| ||||||||||||||||||
Sbjct: 82296 atccccagtctaaaccctaattta 82273

>dbj|BS000606.1| Pan troglodytes chromosome Y clone:PTBY-009G03, complete sequences
          Length = 113454

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tttaggctagctatttatta 165
             ||||||||||||||||||||
Sbjct: 70036 tttaggctagctatttatta 70055

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      tttaggctagctatttatta 165
                ||||||||||||||||||||
Sbjct: 15540838 tttaggctagctatttatta 15540819

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 126     atcccaagtctaaaccctaattta 149
               ||||| ||||||||||||||||||
Sbjct: 4714291 atccccagtctaaaccctaattta 4714268

>dbj|AB071372.1| Asterina pectinifera ApIP3R mRNA for inositol 1,4,5-trisphosphate
            receptor, complete cds
          Length = 9374

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   tagcctggttgttggacaca 81
            ||||||||||||||||||||
Sbjct: 2203 tagcctggttgttggacaca 2184


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,310,399
Number of Sequences: 3902068
Number of extensions: 3310399
Number of successful extensions: 57312
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57239
Number of HSP's gapped (non-prelim): 73
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)