Clone Name | rbart44g08 |
---|---|
Clone Library Name | barley_pub |
>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 215 bits (547), Expect = 2e-56 Identities = 99/111 (89%), Positives = 103/111 (92%) Frame = -3 Query: 394 HNYERTCPLYQSQCVNNEKSHYSGTMNGTIFVVAGGGGSHLSSYAMAIPKWSLFRDLDYG 215 HNYERTCPLYQSQCVN +K+HYSGTMNGTIFVVAGGGGSHLSSY AIPKWS+FRD DYG Sbjct: 257 HNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 316 Query: 214 FVKLTSFNHSSLLFEYKKSSDGNVYDSFTIQRDYRDVLSCVHDSCFPTTLA 62 F KLT+FNHSSLLFEY KSSDG VYDSFTI RDYRDVLSCVHDSCFPTTLA Sbjct: 317 FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLA 367
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 39.7 bits (91), Expect = 0.002 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 10/100 (10%) Frame = -3 Query: 394 HNYERTCPL-----YQSQCVNNEKSHYSGTMNGTIFVVAGGGG-----SHLSSYAMAIPK 245 H YER PL + + N ++Y+ ++ G G S S Sbjct: 501 HWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIINGMAGNIESHSEFSDGEGLTNI 560 Query: 244 WSLFRDLDYGFVKLTSFNHSSLLFEYKKSSDGNVYDSFTI 125 +L + YGF KLT FN ++L +E + DG V DS T+ Sbjct: 561 TALLDKVHYGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 33.1 bits (74), Expect = 0.16 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = -3 Query: 307 IFVVAGGGGSH---LSSYAMAIPKWSLFRDLDYGFVKLTSFNHSSLLFEYKKSSDGN 146 I++ G GG+ L+ PK+S FR+ +G L N + F + ++ DGN Sbjct: 388 IYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDGN 444
>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654| Length = 529 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 38/100 (38%) Frame = -3 Query: 394 HNYERTCPLYQSQCVNNE-------KSHYSGTMNGTIFVVAGGGGSHLSSYAMAIPK--- 245 H+YER+ PL + + +S + GT+ +V GGGG+ + A+ P+ Sbjct: 387 HHYERSHPLRGALGTDTRTPIPVDTRSDLIDSTRGTVHLVIGGGGTSKPTNALLFPQPRC 446 Query: 244 --------------------------WSLFRDLD--YGFV 209 WS FRD D YGFV Sbjct: 447 QVITGVGDFDPAIRRKPSIFVLEDAPWSAFRDRDNPYGFV 486
>NRX4_DROME (Q94887) Neurexin-4 precursor (Neurexin IV)| Length = 1284 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/75 (29%), Positives = 34/75 (45%) Frame = -3 Query: 316 NGTIFVVAGGGGSHLSSYAMAIPKWSLFRDLDYGFVKLTSFNHSSLLFEYKKSSDGNVYD 137 NG + G G + YA+ + + +LD G +TS + SLL D NV+ Sbjct: 226 NGVMMYSRGTQGDY---YALQLKDNKMVLNLDLGSRVMTSLSVGSLL-------DDNVWH 275 Query: 136 SFTIQRDYRDVLSCV 92 I R+ RD++ V Sbjct: 276 DVVISRNQRDIIFSV 290
>VG37_BPT4 (P03744) Long tail fiber protein p37 (Protein Gp37) (Receptor| recognizing protein) Length = 1026 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -3 Query: 361 SQCVNNEKSHYSGTMNGTIFVVAGGGGSHLSSYAMA 254 S N E SHY NGT G GG+ +SSYA++ Sbjct: 922 STSTNGEHSHYIEAWNGT-----GVGGNKMSSYAIS 952
>DSCAM_HUMAN (O60469) Down syndrome cell adhesion molecule precursor (CHD2)| Length = 2012 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = -3 Query: 211 VKLTSFNHSSLLFEYKKSSDGNVYDSF 131 V++T NH +L+ ++ SDG Y F Sbjct: 360 VRITGINHENLIMDHMVKSDGGAYQCF 386
>YG35_BPLLH (Q04769) Hypothetical 13.3 kDa protein in G34 3'region (ORF5)| (ORF118) Length = 118 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 11/77 (14%) Frame = -3 Query: 388 YERTCPLYQ---SQCVNNEKSHYSGTMNGTIFVVAGGGGSHLSSYAMAIPKWS------- 239 Y RT P ++ ++CV N ++ YSGT N +VA G + Y+ IP + Sbjct: 28 YGRTVPTWEGDITKCVVNMQTTYSGT-NNDRQIVANGLIVMYAGYSNPIPTLTKENLGSK 86 Query: 238 -LFRDLDYGFVKLTSFN 191 ++ LDY L F+ Sbjct: 87 LTYQGLDYTVTSLNRFD 103
>GBLP_DROME (O18640) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C homolog) Length = 318 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Frame = -3 Query: 244 WSLFRDLD--YGFVKLTSFNHSSLLFEYKKSSDGN 146 W L RD D YG+ + + HS + + SSDGN Sbjct: 43 WKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGN 77
>UVRC_GEOKA (Q5KWH6) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 590 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -3 Query: 250 PKWSLFR--DLDYGFVKLTSFNHSSLLFEYKKSSDGNVY 140 PK+++ D Y F+K+T+ H LL K DG Y Sbjct: 87 PKYNVMLKDDKSYPFIKITAEKHPRLLITRKVKKDGGKY 125
>ECR_DROME (P34021) Ecdysone receptor (Ecdysteroid receptor)| (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) Length = 878 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -3 Query: 334 HYSGTMNGTIFVVAGGGG 281 H +GT NG I VV GGGG Sbjct: 180 HANGTPNGLIGVVGGGGG 197
>RLP1_SCHPO (O74331) DNA-repair protein rlp1 (RecA-like protein 1)| Length = 363 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 11/67 (16%) Frame = -3 Query: 343 EKSHYSGTMNGTIFVVAGGGGS-------HLSSYAMAIPKWSLF----RDLDYGFVKLTS 197 EK YSG++NGT+ V+ G S HL+S + L + D+ +LT Sbjct: 32 EKVLYSGSVNGTLLVIEGNSCSGKTELLYHLASNVLLRSSQELVLIVSSEWDWSIKRLTF 91 Query: 196 FNHSSLL 176 H L+ Sbjct: 92 ILHERLI 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,553,461 Number of Sequences: 219361 Number of extensions: 780448 Number of successful extensions: 2208 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2207 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)