ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart44f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472727.1| Oryza sativa (japonica cultivar-group), predic... 96 1e-16
2emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 96 1e-16
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
4dbj|AK068563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
5gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clon... 70 7e-09
6gb|AF306829.1|AF306829 Triticum urartu clone 581 cytosolic acety... 68 3e-08
7gb|AF306827.1|AF306827 Triticum monococcum subsp. monococcum clo... 68 3e-08
8gb|AF306824.1|AF306824 Triticum timopheevii subsp. armeniacum cl... 68 3e-08
9emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 44 0.42
10gb|AC109467.3| Homo sapiens chromosome 5 clone RP11-315A2, compl... 44 0.42
11gb|AC008964.6|AC008964 Homo sapiens chromosome 5 clone CTD-2360A... 44 0.42
12dbj|AP006394.1| Lotus japonicus genomic DNA, chromosome 5, clone... 44 0.42
13gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequ... 42 1.7
14gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) g... 42 1.7
15gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) g... 42 1.7
16gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) g... 42 1.7
17gb|AC091814.10| Homo sapiens 12p BAC RP11-290C10 (Roswell Park C... 42 1.7
18gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1... 42 1.7
19emb|BX088566.6| Zebrafish DNA sequence from clone DKEY-63E5 in l... 42 1.7
20dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 42 1.7
21emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in ... 42 1.7
22emb|AL929090.4| Zebrafish DNA sequence from clone CH211-14A14, c... 42 1.7
23emb|AL160234.3|CNS01RGY Human chromosome 14 DNA sequence BAC R-2... 42 1.7
24emb|AL137062.13| Human DNA sequence from clone RP11-198M22 on ch... 42 1.7
25ref|NM_121043.2| Arabidopsis thaliana oxidoreductase AT5G10050 m... 40 6.6
26gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, comp... 40 6.6
27ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfami... 40 6.6
28gb|AC146138.2| Pan troglodytes BAC clone RP43-3D14 from 7, compl... 40 6.6
29gb|AC146392.5| Pan troglodytes BAC clone RP43-57L13 from 7, comp... 40 6.6
30gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosom... 40 6.6
31gb|AC011904.3| Homo sapiens BAC clone CTD-3244O18 from 7, comple... 40 6.6
32gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complet... 40 6.6
33emb|BX511059.10| Zebrafish DNA sequence from clone CH211-253P10 ... 40 6.6
34gb|AF319940.4| Ehrlichia ruminantium isolate Senegal map1 gene c... 40 6.6
35gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 m... 40 6.6
36gb|AC104619.5| Homo sapiens BAC clone RP11-192C21 from 4, comple... 40 6.6
37dbj|AK157975.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 6.6
38gb|AC160569.2| Pan troglodytes BAC clone CH251-279A4 from chromo... 40 6.6
39dbj|AK040312.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 6.6
40gb|AC004977.2|AC004977 Homo sapiens PAC clone RP5-1152C17 from 7... 40 6.6
41gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cance... 40 6.6
42dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
43emb|BX832838.1|CNS09ZAS Arabidopsis thaliana Full-length cDNA Co... 40 6.6
44gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome... 40 6.6
45emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, c... 40 6.6
46emb|BX649532.7| Zebrafish DNA sequence from clone CH211-260H3 in... 40 6.6
47dbj|AK119053.1| Arabidopsis thaliana At5g10050 mRNA for unknown ... 40 6.6
48gb|AC007514.5|AC007514 Homo sapiens chromosome 14 clone BACs 209... 40 6.6
49emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in... 40 6.6
50gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 6.6
51emb|CT009715.15| Mouse DNA sequence from clone RP23-85E24 on chr... 40 6.6
52gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
53emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.6
54emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, B... 40 6.6
55emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060... 40 6.6
56gb|AC145913.3| Gallus gallus BAC clone CH261-50N9 from chromosom... 40 6.6
57dbj|AP006124.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 6.6 
>ref|XM_472727.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 705

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                       
Query: 370 tagaagtaatctctgaaccacaatggggcataatacaggatcgtcagaatagcactgaac 429
           |||||||||||||| ||||| | ||| ||||| ||||  |   | |||||||||||||||
Sbjct: 683 tagaagtaatctctaaaccatagtggtgcatagtacaacaagcttagaatagcactgaac 624

                                                       
Query: 430 tggccgtaagcgaaccaagcgggaggattcttcttaagaaccaa 473
           ||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 623 tggccgtaagcaaaccaggctggaggattcttcttaagaaccaa 580
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>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
             complete sequence
          Length = 138969

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                         
Query: 370   tagaagtaatctctgaaccacaatggggcataatacaggatcgtcagaatagcactgaac 429
             |||||||||||||| ||||| | ||| ||||| ||||  |   | |||||||||||||||
Sbjct: 21527 tagaagtaatctctaaaccatagtggtgcatagtacaacaagcttagaatagcactgaac 21586

                                                         
Query: 430   tggccgtaagcgaaccaagcgggaggattcttcttaagaaccaa 473
             ||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 21587 tggccgtaagcaaaccaggctggaggattcttcttaagaaccaa 21630
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                            
Query: 370      tagaagtaatctctgaaccacaatggggcataatacaggatcgtcagaatagcactgaac 429
                |||||||||||||| ||||| | ||| ||||| ||||  |   | |||||||||||||||
Sbjct: 22812752 tagaagtaatctctaaaccatagtggtgcatagtacaacaagcttagaatagcactgaac 22812811

                                                            
Query: 430      tggccgtaagcgaaccaagcgggaggattcttcttaagaaccaa 473
                ||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 22812812 tggccgtaagcaaaccaggctggaggattcttcttaagaaccaa 22812855
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>dbj|AK068563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153E04, full
            insert sequence
          Length = 1288

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 370  tagaagtaatctctgaaccacaatggggcataatacaggatcgtcagaatagcactgaac 429
            |||||||||||||| ||||| | ||| ||||| ||||  |   | |||||||||||||||
Sbjct: 1042 tagaagtaatctctaaaccatagtggtgcatagtacaacaagcttagaatagcactgaac 983

                                                        
Query: 430  tggccgtaagcgaaccaagcgggaggattcttcttaagaaccaa 473
            ||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 982  tggccgtaagcaaaccaggctggaggattcttcttaagaaccaa 939
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>gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clone 465 cytosolic acetyl-CoA
           carboxylase gene, partial cds
          Length = 1836

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 193 atataagacgtttttatagttcaatttgaactgcaaaaacatcttaaatta 243
           ||||||||||||||| |||||||| ||||||||||||||| ||||| ||||
Sbjct: 752 atataagacgtttttgtagttcaaattgaactgcaaaaacgtcttatatta 702



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 193 atataagacgtttttatagttcaatttgaactgcaaaaacatctta 238
           |||||||||||||||  ||||||||||||||| ||||||| |||||
Sbjct: 704 atataagacgtttttgcagttcaatttgaactacaaaaacgtctta 749
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>gb|AF306829.1|AF306829 Triticum urartu clone 581 cytosolic acetyl-CoA carboxylase gene,
           partial cds
          Length = 1812

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 193 atataagacgtttttatagttcaatttgaactgcaaaaacatctta 238
           ||||||||||||||| |||||||| ||||||||||||||| |||||
Sbjct: 752 atataagacgtttttgtagttcaaattgaactgcaaaaacgtctta 707



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 193 atataagacgtttttatagttcaatttgaactgcaaaaacatctta 238
           |||||||||||||||  ||||||||||||||| ||||||| |||||
Sbjct: 704 atataagacgtttttgcagttcaatttgaactacaaaaacgtctta 749
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>gb|AF306827.1|AF306827 Triticum monococcum subsp. monococcum clone 437 cytosolic
           acetyl-CoA carboxylase gene, partial cds
          Length = 1812

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 193 atataagacgtttttatagttcaatttgaactgcaaaaacatctta 238
           |||||||||||||||  ||||||||||||||||||||||| |||||
Sbjct: 752 atataagacgtttttgcagttcaatttgaactgcaaaaacgtctta 707



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 193 atataagacgtttttatagttcaatttgaactgcaaaaacatctta 238
           |||||||||||||||  ||||||| ||||||||||||||| |||||
Sbjct: 704 atataagacgtttttgcagttcaaattgaactgcaaaaacgtctta 749
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>gb|AF306824.1|AF306824 Triticum timopheevii subsp. armeniacum clone 453 cytosolic
           acetyl-CoA carboxylase gene, partial cds
          Length = 1812

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 193 atataagacgtttttatagttcaatttgaactgcaaaaacatctta 238
           ||||||||||||||| |||||||| ||||||||||||||| |||||
Sbjct: 752 atataagacgtttttgtagttcaaattgaactgcaaaaacgtctta 707



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 193 atataagacgtttttatagttcaatttgaactgcaaaaacatctta 238
           |||||||||||||||  ||||||||||||||| ||||||| |||||
Sbjct: 704 atataagacgtttttgcagttcaatttgaactacaaaaacgtctta 749
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>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
              hansenii
          Length = 1249565

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 167    ttgttaaatatgacctctgtaa 188
              ||||||||||||||||||||||
Sbjct: 585321 ttgttaaatatgacctctgtaa 585342
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>gb|AC109467.3| Homo sapiens chromosome 5 clone RP11-315A2, complete sequence
          Length = 97240

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 458   tcttcttaagaaccaatttgac 479
             ||||||||||||||||||||||
Sbjct: 12583 tcttcttaagaaccaatttgac 12562
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>gb|AC008964.6|AC008964 Homo sapiens chromosome 5 clone CTD-2360A17, complete sequence
          Length = 143841

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 458    tcttcttaagaaccaatttgac 479
              ||||||||||||||||||||||
Sbjct: 140476 tcttcttaagaaccaatttgac 140455
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>dbj|AP006394.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01K09, TM0278,
             complete sequence
          Length = 82082

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 143   gctggaactgggtgtactcaactatt 168
             ||||||| ||||||||||||||||||
Sbjct: 38232 gctggaagtgggtgtactcaactatt 38207
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>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence
          Length = 95814

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    ataaatttcaaaataacatta 70
             |||||||||||||||||||||
Sbjct: 49212 ataaatttcaaaataacatta 49232
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>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds
          Length = 16224

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 182  tctgtaaactgatataagacgtttt 206
            |||||||||| ||||||||||||||
Sbjct: 8417 tctgtaaactaatataagacgtttt 8393
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>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds
          Length = 15688

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 182  tctgtaaactgatataagacgtttt 206
            |||||||||| ||||||||||||||
Sbjct: 7881 tctgtaaactaatataagacgtttt 7857
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>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds
          Length = 16209

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 182  tctgtaaactgatataagacgtttt 206
            |||||||||| ||||||||||||||
Sbjct: 8402 tctgtaaactaatataagacgtttt 8378
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>gb|AC091814.10| Homo sapiens 12p BAC RP11-290C10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 149000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 230  aacatcttaaattaatttacagagg 254
            ||||||||||||||||||| |||||
Sbjct: 3940 aacatcttaaattaatttaaagagg 3916
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>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 182   tctgtaaactgatataagacgtttt 206
             |||||||||| ||||||||||||||
Sbjct: 74953 tctgtaaactaatataagacgtttt 74929
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>emb|BX088566.6| Zebrafish DNA sequence from clone DKEY-63E5 in linkage group 6,
             complete sequence
          Length = 195778

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 365   gcctgtagaagtaatctctga 385
             |||||||||||||||||||||
Sbjct: 84473 gcctgtagaagtaatctctga 84453
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 329     tctctggttatcttcgatatt 349
               |||||||||||||||||||||
Sbjct: 1596364 tctctggttatcttcgatatt 1596384
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>emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in linkage group 6, complete
              sequence
          Length = 223000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 365    gcctgtagaagtaatctctga 385
              |||||||||||||||||||||
Sbjct: 195027 gcctgtagaagtaatctctga 195007
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>emb|AL929090.4| Zebrafish DNA sequence from clone CH211-14A14, complete sequence
          Length = 178077

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 226    caaaaacatcttaaattaatttaca 250
              |||||| ||||||||||||||||||
Sbjct: 153194 caaaaaaatcttaaattaatttaca 153170
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>emb|AL160234.3|CNS01RGY Human chromosome 14 DNA sequence BAC R-22F22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155735

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     ctactgaaaccattatttcat 93
              |||||||||||||||||||||
Sbjct: 128931 ctactgaaaccattatttcat 128951
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>emb|AL137062.13| Human DNA sequence from clone RP11-198M22 on chromosome 6, complete
              sequence
          Length = 137272

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 230    aacatcttaaattaatttacagagg 254
              ||||||||||||||||||| |||||
Sbjct: 125735 aacatcttaaattaatttaaagagg 125759
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>ref|NM_121043.2| Arabidopsis thaliana oxidoreductase AT5G10050 mRNA, complete cds
          Length = 981

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 441 gaaccaagcgggaggattcttctt 464
           |||||||||||| |||||||||||
Sbjct: 798 gaaccaagcgggtggattcttctt 775
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>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence
          Length = 173643

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   agtaatctctgaaccacaat 393
             ||||||||||||||||||||
Sbjct: 29797 agtaatctctgaaccacaat 29778
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>ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfamily A (CYP3A) on
             chromosome 7
          Length = 428605

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   aaacatcttaaattaatttacaga 252
             |||||||||||||||||| |||||
Sbjct: 17748 aaacatcttaaattaattaacaga 17725
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>gb|AC146138.2| Pan troglodytes BAC clone RP43-3D14 from 7, complete sequence
          Length = 176823

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   aaacatcttaaattaatttacaga 252
             |||||||||||||||||| |||||
Sbjct: 56587 aaacatcttaaattaattaacaga 56610
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>gb|AC146392.5| Pan troglodytes BAC clone RP43-57L13 from 7, complete sequence
          Length = 170470

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   aaacatcttaaattaatttacaga 252
             |||||||||||||||||| |||||
Sbjct: 12685 aaacatcttaaattaattaacaga 12662
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>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence
          Length = 176549

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    ctcaactattgttaaatatg 178
              ||||||||||||||||||||
Sbjct: 117222 ctcaactattgttaaatatg 117203
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>gb|AC011904.3| Homo sapiens BAC clone CTD-3244O18 from 7, complete sequence
          Length = 113879

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   aaacatcttaaattaatttacaga 252
             |||||||||||||||||| |||||
Sbjct: 17748 aaacatcttaaattaattaacaga 17725
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>gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complete sequence
          Length = 115003

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tcttaaattaatttacagag 253
             ||||||||||||||||||||
Sbjct: 72596 tcttaaattaatttacagag 72615
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>emb|BX511059.10| Zebrafish DNA sequence from clone CH211-253P10 in linkage group 14,
             complete sequence
          Length = 107605

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   tttgaactgcaaaaacatct 236
             ||||||||||||||||||||
Sbjct: 12258 tttgaactgcaaaaacatct 12239
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>gb|AF319940.4| Ehrlichia ruminantium isolate Senegal map1 gene cluster, partial
            sequence
          Length = 19449

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   aaatttcaaaataacattat 71
            ||||||||||||||||||||
Sbjct: 7825 aaatttcaaaataacattat 7844
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>gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 map 17, complete sequence
          Length = 223005

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ataaatttcaaaataacatt 69
              ||||||||||||||||||||
Sbjct: 207874 ataaatttcaaaataacatt 207855
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>gb|AC104619.5| Homo sapiens BAC clone RP11-192C21 from 4, complete sequence
          Length = 187749

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   aaaacatcttaaattaattt 247
             ||||||||||||||||||||
Sbjct: 23225 aaaacatcttaaattaattt 23244
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>dbj|AK157975.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930012O21 product:unclassifiable, full
            insert sequence
          Length = 1538

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   ataaatttcaaaataacatt 69
            ||||||||||||||||||||
Sbjct: 1291 ataaatttcaaaataacatt 1272
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>gb|AC160569.2| Pan troglodytes BAC clone CH251-279A4 from chromosome unknown, complete
             sequence
          Length = 147345

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   ttcatgaccagcctgtagaa 374
             ||||||||||||||||||||
Sbjct: 77894 ttcatgaccagcctgtagaa 77913
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>dbj|AK040312.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A430085M21 product:hypothetical protein,
            full insert sequence
          Length = 3024

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  ctcaactattgttaaatatg 178
            ||||||||||||||||||||
Sbjct: 2532 ctcaactattgttaaatatg 2513
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>gb|AC004977.2|AC004977 Homo sapiens PAC clone RP5-1152C17 from 7, complete sequence
          Length = 106473

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   aaacatcttaaattaatttacaga 252
             |||||||||||||||||| |||||
Sbjct: 63015 aaacatcttaaattaattaacaga 62992
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>gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206705

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    gaggactttacacttggact 122
              ||||||||||||||||||||
Sbjct: 126555 gaggactttacacttggact 126536
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 221      aactgcaaaaacatcttaaa 240
                ||||||||||||||||||||
Sbjct: 11179220 aactgcaaaaacatcttaaa 11179239
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>emb|BX832838.1|CNS09ZAS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL15ZG12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 930

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 441 gaaccaagcgggaggattcttctt 464
           |||||||||||| |||||||||||
Sbjct: 756 gaaccaagcgggtggattcttctt 733
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>gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome 17, complete sequence
          Length = 224908

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ataaatttcaaaataacatt 69
             ||||||||||||||||||||
Sbjct: 13249 ataaatttcaaaataacatt 13230
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>emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, complete sequence
          Length = 219044

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     cataaatttcaaaataacat 68
              ||||||||||||||||||||
Sbjct: 206387 cataaatttcaaaataacat 206406
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>emb|BX649532.7| Zebrafish DNA sequence from clone CH211-260H3 in linkage group 20,
             complete sequence
          Length = 159939

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    cataaatttcaaaataacat 68
             ||||||||||||||||||||
Sbjct: 43628 cataaatttcaaaataacat 43609
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>dbj|AK119053.1| Arabidopsis thaliana At5g10050 mRNA for unknown protein, complete
           cds, clone: RAFL21-39-H01
          Length = 981

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 441 gaaccaagcgggaggattcttctt 464
           |||||||||||| |||||||||||
Sbjct: 798 gaaccaagcgggtggattcttctt 775
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>gb|AC007514.5|AC007514 Homo sapiens chromosome 14 clone BACs 209A20 and 396N8 map 14q31,
             complete sequence
          Length = 177720

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    cataaatttcaaaataacattata 72
             |||||||||||||||||| |||||
Sbjct: 50130 cataaatttcaaaataactttata 50153
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>emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in linkage group 25,
            complete sequence
          Length = 236784

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   cataaatttcaaaataacat 68
            ||||||||||||||||||||
Sbjct: 5782 cataaatttcaaaataacat 5763
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 458     tcttcttaagaaccaatttgacga 481
               |||||| |||||||||||||||||
Sbjct: 1906002 tcttctaaagaaccaatttgacga 1905979
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>emb|CT009715.15| Mouse DNA sequence from clone RP23-85E24 on chromosome 17, complete
             sequence
          Length = 178948

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ataaatttcaaaataacatt 69
             ||||||||||||||||||||
Sbjct: 87978 ataaatttcaaaataacatt 87959
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 221      aactgcaaaaacatcttaaa 240
                ||||||||||||||||||||
Sbjct: 11178891 aactgcaaaaacatcttaaa 11178910
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>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 157771

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  aactgcaaaaacatcttaaa 240
            ||||||||||||||||||||
Sbjct: 6983 aactgcaaaaacatcttaaa 6964
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>emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project)
          Length = 80088

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 441   gaaccaagcgggaggattcttctt 464
             |||||||||||| |||||||||||
Sbjct: 10244 gaaccaagcgggtggattcttctt 10221
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>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 108805

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   aactgcaaaaacatcttaaa 240
             ||||||||||||||||||||
Sbjct: 77438 aactgcaaaaacatcttaaa 77419
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>gb|AC145913.3| Gallus gallus BAC clone CH261-50N9 from chromosome unknown, complete
              sequence
          Length = 182816

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    catcttaaattaatttacag 251
              ||||||||||||||||||||
Sbjct: 161971 catcttaaattaatttacag 161990
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>dbj|AP006124.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15N01, TM0209,
             complete sequence
          Length = 104684

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   gctggaactgggtgtactcaacta 166
             ||||||| ||||||||||||||||
Sbjct: 86555 gctggaagtgggtgtactcaacta 86578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,905,702
Number of Sequences: 3902068
Number of extensions: 4905702
Number of successful extensions: 106421
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106214
Number of HSP's gapped (non-prelim): 207
length of query: 487
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 465
effective length of database: 17,147,199,772
effective search space: 7973447893980
effective search space used: 7973447893980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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