>ref|NM_188014.1| Oryza sativa (japonica cultivar-group), Ozsa8434 predicted mRNA
          Length = 930

 Score =  131 bits (66), Expect = 2e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                       
Query: 229 tgttccacccctgggagatgcttgaaatgccgtcaatttttgcttccccagctttctgcc 288
           |||||||| ||| || || || ||||| ||||| | |||||| |||||||||||||  ||
Sbjct: 843 tgttccactccttggcgaagcctgaaacgccgtaagtttttgtttccccagctttccacc 784

                                                                       
Query: 289 ccaatagggtgccaaaacacaatgtatactgccagtaacggggtcctcatctatcccaaa 348
           ||| || ||||||| ||||||||||   || |||   || || |||||||||||||||||
Sbjct: 783 ccagtaaggtgccagaacacaatgtgcgcttccacacacaggatcctcatctatcccaaa 724

                                                                       
Query: 349 ttttgggcagaagaaacgtgtaaagaagtcataaccagatccggcaggcgccggtcctgt 408
           ||||||||||||||| |||| ||||||||||||| ||||||| ||||| || ||||| ||
Sbjct: 723 ttttgggcagaagaatcgtgaaaagaagtcataatcagatccagcaggtgctggtcccgt 664

                 
Query: 409 aacaat 414
           ||||||
Sbjct: 663 aacaat 658

>dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I08, full
           insert sequence
          Length = 1161

 Score =  131 bits (66), Expect = 2e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                       
Query: 229 tgttccacccctgggagatgcttgaaatgccgtcaatttttgcttccccagctttctgcc 288
           |||||||| ||| || || || ||||| ||||| | |||||| |||||||||||||  ||
Sbjct: 925 tgttccactccttggcgaagcctgaaacgccgtaagtttttgtttccccagctttccacc 866

                                                                       
Query: 289 ccaatagggtgccaaaacacaatgtatactgccagtaacggggtcctcatctatcccaaa 348
           ||| || ||||||| ||||||||||   || |||   || || |||||||||||||||||
Sbjct: 865 ccagtaaggtgccagaacacaatgtgcgcttccacacacaggatcctcatctatcccaaa 806

                                                                       
Query: 349 ttttgggcagaagaaacgtgtaaagaagtcataaccagatccggcaggcgccggtcctgt 408
           ||||||||||||||| |||| ||||||||||||| ||||||| ||||| || ||||| ||
Sbjct: 805 ttttgggcagaagaatcgtgaaaagaagtcataatcagatccagcaggtgctggtcccgt 746

                 
Query: 409 aacaat 414
           ||||||
Sbjct: 745 aacaat 740

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  107 bits (54), Expect = 3e-20
 Identities = 75/82 (91%)
 Strand = Plus / Plus

                                                                           
Query: 333     cctcatctatcccaaattttgggcagaagaaacgtgtaaagaagtcataaccagatccgg 392
               ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |
Sbjct: 9114830 cctcatctatcccaaattttgggcagaagaatcgtgaaaagaagtcataatcagatccag 9114889

                                     
Query: 393     caggcgccggtcctgtaacaat 414
               |||| || ||||| ||||||||
Sbjct: 9114890 caggtgctggtcccgtaacaat 9114911



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                           
Query: 251     tgaaatgccgtcaatttttgcttccccagctttctgccccaatagggtgccaaaacacaa 310
               ||||| ||||| | |||||| |||||||||||||  ||||| || ||||||| |||||||
Sbjct: 9113953 tgaaacgccgtaagtttttgtttccccagctttccaccccagtaaggtgccagaacacaa 9114012

                  
Query: 311     tgt 313
               |||
Sbjct: 9114013 tgt 9114015



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 162     ccatcacagttagagcttctccctggat 189
               |||||||||| | |||||||||||||||
Sbjct: 9113748 ccatcacagtgacagcttctccctggat 9113775

>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0499C11
          Length = 151369

 Score =  107 bits (54), Expect = 3e-20
 Identities = 75/82 (91%)
 Strand = Plus / Plus

                                                                          
Query: 333    cctcatctatcccaaattttgggcagaagaaacgtgtaaagaagtcataaccagatccgg 392
              ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |
Sbjct: 143837 cctcatctatcccaaattttgggcagaagaatcgtgaaaagaagtcataatcagatccag 143896

                                    
Query: 393    caggcgccggtcctgtaacaat 414
              |||| || ||||| ||||||||
Sbjct: 143897 caggtgctggtcccgtaacaat 143918



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                          
Query: 251    tgaaatgccgtcaatttttgcttccccagctttctgccccaatagggtgccaaaacacaa 310
              ||||| ||||| | |||||| |||||||||||||  ||||| || ||||||| |||||||
Sbjct: 142960 tgaaacgccgtaagtttttgtttccccagctttccaccccagtaaggtgccagaacacaa 143019

                 
Query: 311    tgt 313
              |||
Sbjct: 143020 tgt 143022



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 162    ccatcacagttagagcttctccctggat 189
              |||||||||| | |||||||||||||||
Sbjct: 142755 ccatcacagtgacagcttctccctggat 142782

>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score =  107 bits (54), Expect = 3e-20
 Identities = 75/82 (91%)
 Strand = Plus / Plus

                                                                         
Query: 333   cctcatctatcccaaattttgggcagaagaaacgtgtaaagaagtcataaccagatccgg 392
             ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |
Sbjct: 15212 cctcatctatcccaaattttgggcagaagaatcgtgaaaagaagtcataatcagatccag 15271

                                   
Query: 393   caggcgccggtcctgtaacaat 414
             |||| || ||||| ||||||||
Sbjct: 15272 caggtgctggtcccgtaacaat 15293



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                         
Query: 251   tgaaatgccgtcaatttttgcttccccagctttctgccccaatagggtgccaaaacacaa 310
             ||||| ||||| | |||||| |||||||||||||  ||||| || ||||||| |||||||
Sbjct: 14335 tgaaacgccgtaagtttttgtttccccagctttccaccccagtaaggtgccagaacacaa 14394

                
Query: 311   tgt 313
             |||
Sbjct: 14395 tgt 14397



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 162   ccatcacagttagagcttctccctggat 189
             |||||||||| | |||||||||||||||
Sbjct: 14130 ccatcacagtgacagcttctccctggat 14157

>gb|AY112642.1| Zea mays CL17031_1 mRNA sequence
          Length = 414

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                       
Query: 220 caggtatagtgttccacccctgggagatgcttgaaatgccgtcaatttttgcttccccag 279
           |||||||||| |||||| ||  || ||||||||||| ||  ||| ||| || ||||||||
Sbjct: 161 caggtatagtattccactccgaggggatgcttgaaacgctatcagtttgtgtttccccag 102

                                                      
Query: 280 ctttctgccccaatagggtgccaaaacacaatgtatactgcca 322
           ||| |  ||||| || ||||| ||||||||||||  |||||||
Sbjct: 101 cttcccaccccagtaaggtgctaaaacacaatgtgcactgcca 59

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 163      catcacagttagagcttctccctggatt 190
                ||||| ||||||||||||||||||||||
Sbjct: 20152471 catcaaagttagagcttctccctggatt 20152498

>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0047P18
          Length = 169128

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 163   catcacagttagagcttctccctggatt 190
             ||||| ||||||||||||||||||||||
Sbjct: 45971 catcaaagttagagcttctccctggatt 45998

>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence,
             complete sequence
          Length = 140064

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 92    catatacgagtagatggatcatggatg 118
             |||| ||||||||||||||||||||||
Sbjct: 24653 cataaacgagtagatggatcatggatg 24627

>gb|AC089982.15| Homo sapiens 12 BAC RP11-25I15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173877

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     acaacaaacagaatcaccact 22
             |||||||||||||||||||||
Sbjct: 60170 acaacaaacagaatcaccact 60150

>gb|AC012433.7| Homo sapiens, clone RP11-10I6, complete sequence
          Length = 144804

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 186   ggatttgcactctctgatttg 206
             |||||||||||||||||||||
Sbjct: 16104 ggatttgcactctctgatttg 16084

>emb|AJ222905.1|HSA222905 Homo sapiens mRNA for rearranged IgM heavy chain,
           IgVH4.21-D-JH4B-Cmu, clone EJ 8
          Length = 353

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 178 ttctccctggatttgcactctctga 202
           ||||||||||| |||||||||||||
Sbjct: 207 ttctccctggagttgcactctctga 231

>emb|AL844590.3| Mouse DNA sequence from clone RP23-335P15 on chromosome 2, complete
              sequence
          Length = 231459

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     aatcaccactatccaaagtca 33
              |||||||||||||||||||||
Sbjct: 153588 aatcaccactatccaaagtca 153608

>gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H120), complete
            sequence
          Length = 102431

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tccccagctttctgccccaa 292
            ||||||||||||||||||||
Sbjct: 1482 tccccagctttctgccccaa 1463

>ref|XM_387538.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07362.1)
           partial mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   caacaaacagaatcaccact 22
           ||||||||||||||||||||
Sbjct: 868 caacaaacagaatcaccact 849

>gb|AC125533.4| Mus musculus BAC clone RP23-451C1 from chromosome 5, complete sequence
          Length = 180892

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    gaaattgccaaaggcatgct 139
              ||||||||||||||||||||
Sbjct: 152814 gaaattgccaaaggcatgct 152795

>emb|AL451123.12| Human DNA sequence from clone RP11-27J8 on chromosome 9 Contains the
            gene for interferon kappa precursor (IFNK), the 5' UTR of
            a novel gene (FLJ13204), a novel gene, includes FLJ25077
            and FLJ11109 (MGC23980) and 2 CpG islands, complete
            sequence
          Length = 140827

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  tgcttccccagctttctgcc 288
            ||||||||||||||||||||
Sbjct: 8313 tgcttccccagctttctgcc 8332

>gb|AC175696.2| Otolemur garnetti, clone XX-8122D2, complete sequence
          Length = 43820

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   caatgtatactgccagtaac 327
             ||||||||||||||||||||
Sbjct: 10661 caatgtatactgccagtaac 10680

>gb|AC106746.2| Homo sapiens chromosome 5 clone RP11-149E17, complete sequence
          Length = 179868

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    tccccagctttctgccccaa 292
              ||||||||||||||||||||
Sbjct: 176928 tccccagctttctgccccaa 176909

>gb|AC008432.5| Homo sapiens chromosome 5 clone CTC-320C6, complete sequence
          Length = 170216

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   ttttgcttccccagctttct 285
             ||||||||||||||||||||
Sbjct: 83990 ttttgcttccccagctttct 83971

>gb|L81905.1|HSL81905 Homo sapiens (subclone 1_a3 from P1 H69) DNA sequence, complete
            sequence
          Length = 3304

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  tccccagctttctgccccaa 292
            ||||||||||||||||||||
Sbjct: 2611 tccccagctttctgccccaa 2630

>gb|AC156790.2| Mus musculus BAC clone RP24-359N3 from chromosome 14, complete sequence
          Length = 233946

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aacaaacagaatcaccacta 23
              ||||||||||||||||||||
Sbjct: 122678 aacaaacagaatcaccacta 122697


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,043,277
Number of Sequences: 3902068
Number of extensions: 4043277
Number of successful extensions: 79224
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79157
Number of HSP's gapped (non-prelim): 67
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)