>gb|AC117559.7| Mus musculus chromosome 5, clone RP24-170C14, complete sequence
          Length = 129660

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ggaaaaactactcttatttt 42
             ||||||||||||||||||||
Sbjct: 92516 ggaaaaactactcttatttt 92497

>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19,
             complete sequence
          Length = 156002

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aaaaactactcttattttgc 44
             ||||||||||||||||||||
Sbjct: 45536 aaaaactactcttattttgc 45517

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 25       aaaaactactcttattttgc 44
                ||||||||||||||||||||
Sbjct: 21523447 aaaaactactcttattttgc 21523428

>gb|AC114627.8| Mus musculus chromosome 3, clone RP24-108F9, complete sequence
          Length = 152152

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    tttgcctggcttggatcaaa 59
             ||||||||||||||||||||
Sbjct: 51255 tttgcctggcttggatcaaa 51274

>emb|AL844864.6| Mouse DNA sequence from clone RP23-360L8 on chromosome X, complete
              sequence
          Length = 138582

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     actcttattttgcctggctt 51
              ||||||||||||||||||||
Sbjct: 124309 actcttattttgcctggctt 124290

>emb|AL355809.11| Human DNA sequence from clone RP4-650K8 on chromosome 1 Contains part
             of the gene for a novel protein, complete sequence
          Length = 120340

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    ggtagggaaaaactactct 36
             |||||||||||||||||||
Sbjct: 70922 ggtagggaaaaactactct 70940

>gb|AC084013.5| Homo sapiens BAC clone RP11-169I13 from 2, complete sequence
          Length = 105604

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   ggaaaaactactcttattt 41
            |||||||||||||||||||
Sbjct: 7993 ggaaaaactactcttattt 7975

>gb|AC130403.3| Homo sapiens 12 BAC RP11-674N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 195432

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    ttattttgcctggcttgga 54
             |||||||||||||||||||
Sbjct: 96100 ttattttgcctggcttgga 96118

>emb|BX465847.15| Mouse DNA sequence from clone RP23-102L14 on chromosome X, complete
              sequence
          Length = 206399

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 20     tagggaaaaactactcttatttt 42
              ||||||||||||||| |||||||
Sbjct: 157714 tagggaaaaactactattatttt 157692

>emb|CT030167.8| Mouse DNA sequence from clone RP23-333E24 on chromosome 13, complete
            sequence
          Length = 192930

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 42   tgcctggcttggatcaaaa 60
            |||||||||||||||||||
Sbjct: 3982 tgcctggcttggatcaaaa 3964

>emb|AL590991.14| Mouse DNA sequence from clone RP23-255N16 on chromosome 11, complete
              sequence
          Length = 194872

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 24     gaaaaactactcttatttt 42
              |||||||||||||||||||
Sbjct: 107471 gaaaaactactcttatttt 107489

>gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosome 14, complete sequence
          Length = 215802

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 25     aaaaactactcttatttt 42
              ||||||||||||||||||
Sbjct: 160320 aaaaactactcttatttt 160303

>gb|AE006399.1| Lactococcus lactis subsp. lactis IL1403 section 161 of 218 of the
            complete genome
          Length = 11698

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 25   aaaaactactcttatttt 42
            ||||||||||||||||||
Sbjct: 9041 aaaaactactcttatttt 9058

>gb|AF372734.1| Uncultured metazoan clone BAQA250 small subunit ribosomal RNA gene,
            partial sequence
          Length = 1691

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 11   cctctcgggtagggaaaaacta 32
            |||||||| |||||||||||||
Sbjct: 1426 cctctcggatagggaaaaacta 1405

>gb|AC118006.9| Mus musculus chromosome 14, clone RP23-344J14, complete sequence
          Length = 232234

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 25   aaaaactactcttatttt 42
            ||||||||||||||||||
Sbjct: 2843 aaaaactactcttatttt 2826

>emb|AL583850.5| Human DNA sequence from clone RP11-430G6 on chromosome 1 Contains the
              RGS4 gene for regulator of G-protein signalling 4 and the
              3' end of the RGS5 gene for regulator of G-protein
              signalling 5, complete sequence
          Length = 165329

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 40     tttgcctggcttggatca 57
              ||||||||||||||||||
Sbjct: 110044 tttgcctggcttggatca 110027

>emb|AL133474.9| Human DNA sequence from clone RP1-239I6 on chromosome 6, complete
             sequence
          Length = 102142

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    aaaaactactcttatttt 42
             ||||||||||||||||||
Sbjct: 63450 aaaaactactcttatttt 63433

>gb|AC144546.9| Homo sapiens 3 BAC RP11-62D17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 47252

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 40    tttgcctggcttggatca 57
             ||||||||||||||||||
Sbjct: 17768 tttgcctggcttggatca 17751

>emb|BX539336.7| Zebrafish DNA sequence from clone CH211-128H21 in linkage group 23,
              complete sequence
          Length = 183357

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 34     tcttattttgcctggctt 51
              ||||||||||||||||||
Sbjct: 117642 tcttattttgcctggctt 117625

>dbj|AK077944.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030456L21
           product:unclassifiable, full insert sequence
          Length = 3142

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 35  cttattttgcctggcttg 52
           ||||||||||||||||||
Sbjct: 663 cttattttgcctggcttg 646

>emb|AL808131.9| Mouse DNA sequence from clone RP23-367H7 on chromosome X, complete
            sequence
          Length = 210322

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 35   cttattttgcctggcttg 52
            ||||||||||||||||||
Sbjct: 2613 cttattttgcctggcttg 2596

>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete
              sequence
          Length = 207922

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 23     ggaaaaactactcttatt 40
              ||||||||||||||||||
Sbjct: 154135 ggaaaaactactcttatt 154152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 593,126
Number of Sequences: 3902068
Number of extensions: 593126
Number of successful extensions: 34768
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34729
Number of HSP's gapped (non-prelim): 39
length of query: 66
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 45
effective length of database: 17,151,101,840
effective search space: 771799582800
effective search space used: 771799582800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)