>gb|AC132458.3| Mus musculus BAC clone RP23-152C8 from chromosome 5, complete sequence
          Length = 219470

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 84     atttaaatgcaaaatactcttct 106
              |||||||||||||||||||||||
Sbjct: 107758 atttaaatgcaaaatactcttct 107736

>gb|AC157978.25| Medicago truncatula clone mth2-47l16, complete sequence
          Length = 125021

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 84   atttaaatgcaaaatactctt 104
            |||||||||||||||||||||
Sbjct: 8714 atttaaatgcaaaatactctt 8694

>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     ttgttttctaaatttaaatg 92
              ||||||||||||||||||||
Sbjct: 205374 ttgttttctaaatttaaatg 205355

>gb|AC004643.1| Homo sapiens chromosome 16, cosmid clone 363E3 (LANL), complete
             sequence
          Length = 43411

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tgtggggccaccaggtcagc 226
             ||||||||||||||||||||
Sbjct: 30510 tgtggggccaccaggtcagc 30491

>gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, complete sequence
          Length = 177037

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ttttctaaatttaaatgcaa 95
             ||||||||||||||||||||
Sbjct: 66632 ttttctaaatttaaatgcaa 66613

>gb|AY423628.1| Beet leafhopper transmitted virescence phytoplasma plasmid pBLTVA-2,
            complete sequence
          Length = 2587

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tagctttgttttctaaattt 87
            ||||||||||||||||||||
Sbjct: 1366 tagctttgttttctaaattt 1385



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tagctttgttttctaaattt 87
            ||||||||||||||||||||
Sbjct: 1028 tagctttgttttctaaattt 1047

>gb|AY423627.1| Beet leafhopper transmitted virescence phytoplasma plasmid pBLTVA-1,
            complete sequence
          Length = 10785

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tagctttgttttctaaattt 87
            ||||||||||||||||||||
Sbjct: 9564 tagctttgttttctaaattt 9583



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tagctttgttttctaaattt 87
            ||||||||||||||||||||
Sbjct: 9226 tagctttgttttctaaattt 9245

>gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome 16, complete sequence
          Length = 189550

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ctttgttttctaaatttaaa 90
             ||||||||||||||||||||
Sbjct: 65475 ctttgttttctaaatttaaa 65494

>gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1, complete sequence
          Length = 204558

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     tctaaatttaaatgcaaaatactc 102
              ||||||||||| ||||||||||||
Sbjct: 182141 tctaaatttaagtgcaaaatactc 182118

>gb|U95743.1|HUU95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete sequence
          Length = 192730

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ctttgttttctaaatttaaa 90
              ||||||||||||||||||||
Sbjct: 136771 ctttgttttctaaatttaaa 136790

>gb|AC126431.3| Mus musculus BAC clone RP24-407P8 from chromosome 6, complete
            sequence
          Length = 144924

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   tttgttttctaaatttaaat 91
            ||||||||||||||||||||
Sbjct: 9850 tttgttttctaaatttaaat 9869

>gb|AC102568.8| Mus musculus chromosome 1, clone RP23-224O10, complete sequence
          Length = 239053

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tctaaatttaaatgcaaaatactc 102
              ||||||||||| ||||||||||||
Sbjct: 167818 tctaaatttaagtgcaaaatactc 167841

>gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete sequence
          Length = 106528

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    gtagctttgttttctaaatt 86
             ||||||||||||||||||||
Sbjct: 14870 gtagctttgttttctaaatt 14851

>emb|BX465197.8| Zebrafish DNA sequence from clone DKEY-184E24 in linkage group 14,
             complete sequence
          Length = 101530

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    tttctaaatttaaatgcaaaatac 100
             ||||| ||||||||||||||||||
Sbjct: 37478 tttcttaatttaaatgcaaaatac 37455

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     ctttgttttctaaatttaaa 90
              ||||||||||||||||||||
Sbjct: 571679 ctttgttttctaaatttaaa 571660

>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence
          Length = 180354

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   tgtggggccaccaggtcagc 226
             ||||||||||||||||||||
Sbjct: 21750 tgtggggccaccaggtcagc 21769

>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0094B20
          Length = 146270

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ctttgttttctaaatttaaa 90
             ||||||||||||||||||||
Sbjct: 24689 ctttgttttctaaatttaaa 24670

>dbj|BS000076.1| Pan troglodytes chromosome 22 clone:PTB-096O09, map 22, complete
             sequences
          Length = 186284

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 86    ttaaatgcaaaatactcttctgcattgc 113
             |||||||||||||| ||||| |||||||
Sbjct: 14382 ttaaatgcaaaatagtcttcagcattgc 14355

>dbj|BS000075.1| Pan troglodytes chromosome 22 clone:RP43-111A01, map 22, complete
             sequences
          Length = 160980

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 86    ttaaatgcaaaatactcttctgcattgc 113
             |||||||||||||| ||||| |||||||
Sbjct: 89889 ttaaatgcaaaatagtcttcagcattgc 89862

>emb|BX004867.7| Zebrafish DNA sequence from clone CH211-159K2 in linkage group 14,
             complete sequence
          Length = 160087

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    tttctaaatttaaatgcaaaatac 100
             ||||| ||||||||||||||||||
Sbjct: 51620 tttcttaatttaaatgcaaaatac 51643

>gb|AC125292.4| Drosophila melanogaster X BAC CH223-5O10 (Children's Hospital Oakland
             Research Institute Drosophila melanogaster sheared DNA BAC
             Library) complete sequence
          Length = 95026

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 75    gttttctaaatttaaatg-caaaatact 101
             |||||||||||||||||| |||||||||
Sbjct: 43652 gttttctaaatttaaatgccaaaatact 43625

>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete
             sequence
          Length = 314111

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 75    gttttctaaatttaaatg-caaaatact 101
             |||||||||||||||||| |||||||||
Sbjct: 44062 gttttctaaatttaaatgccaaaatact 44035

>dbj|AP001683.1| Homo sapiens genomic DNA, chromosome 21q, section 27/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 86    ttaaatgcaaaatactcttctgcattgc 113
             |||||||||||||| ||||| |||||||
Sbjct: 77944 ttaaatgcaaaatagtcttcagcattgc 77917

>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              1/6
          Length = 314150

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     ttgttttctaaatttaaatg 92
              ||||||||||||||||||||
Sbjct: 207342 ttgttttctaaatttaaatg 207323

>gb|AC132409.3| Mus musculus BAC clone RP23-346B1 from 6, complete sequence
          Length = 207528

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   tttgttttctaaatttaaat 91
            ||||||||||||||||||||
Sbjct: 5810 tttgttttctaaatttaaat 5791

>dbj|AP000472.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B258A5,
             LL56-APP region, complete sequence
          Length = 169328

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 86    ttaaatgcaaaatactcttctgcattgc 113
             |||||||||||||| ||||| |||||||
Sbjct: 71661 ttaaatgcaaaatagtcttcagcattgc 71634


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,164,312
Number of Sequences: 3902068
Number of extensions: 2164312
Number of successful extensions: 47755
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 47647
Number of HSP's gapped (non-prelim): 110
length of query: 229
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 207
effective length of database: 17,147,199,772
effective search space: 3549470352804
effective search space used: 3549470352804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)