>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +1

Query: 97  HTPRRDGKFENY---YRGRGRNTIHVRAHQQPPPPPHDRSTMNSDKIPSMA 240
           H PR +   +N    Y     +TI    H+ PPPPP    T +SD+  S +
Sbjct: 154 HGPRGESLIDNQRKRYNYEDVDTIPTTKHKAPPPPPPTAETFDSDQTSSFS 204

>INADL_MOUSE (Q63ZW7) InaD-like protein (Inadl protein) (Pals1-associated tight|
           junction protein) (Protein associated to tight
           junctions) (Channel-interacting PDZ domain-containing
           protein)
          Length = 1834

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 160 HVRAHQQPPPPPHDRSTMNSDKIPSMAAQTDW 255
           H+RA +  PPPPH R    +  +  + A T W
Sbjct: 882 HLRAMESNPPPPHIREAAPASPVLELQAGTQW 913

>NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding protein (NonO|
           protein)
          Length = 471

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 88  RQAHTPRRDGKFENYYRGRGRNTIHVRAHQQPPPPP 195
           +Q HTPR+      +++   +   H +  QQPPPPP
Sbjct: 11  KQNHTPRK------HHQHHHQQQHHQQQQQQPPPPP 40

>NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding protein (NonO|
           protein) (54 kDa nuclear RNA- and DNA-binding protein)
           (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55)
           (DNA-binding p52/p100 complex, 52 kDa subunit)
          Length = 471

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 88  RQAHTPRRDGKFENYYRGRGRNTIHVRAHQQPPPPP 195
           +Q HTPR+      +++   +   H +  QQPPPPP
Sbjct: 11  KQNHTPRK------HHQHHHQQQHHQQQQQQPPPPP 40

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +1

Query: 76   RGRCRQAHTPRR--DGKFENYYRGRGRNTIHVRAHQQPPPPPHDRSTMNSDK 225
            RGR R+   P R  +G+ E    G G      R H+  PPP +D      D+
Sbjct: 982  RGRHREGSRPARSGEGEAEGPDGGGGGGGERRRRHRHGPPPAYDPDARRDDR 1033

>AF9_USTMA (Q4PFI5) Protein AF-9 homolog|
          Length = 431

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 113 TANLKTITGGAAETRSTYARTSNHHHHHMIGRR 211
           T +  +  GG+A T ST  R   H +H M+G +
Sbjct: 84  TPSSSSAAGGSAATVSTRGRDQEHDYHKMVGNK 116

>V120_EBV (P03189) Capsid assembly protein BOLF1|
          Length = 1239

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 139  GRGRNTIHVRAHQQPPPPPHDRSTMNSDKIPSMAAQTDWS 258
            G GRN    RA +   PPPH R     D  P   + +D+S
Sbjct: 1088 GNGRNASKRRASRDLSPPPHGRWRAVLDSSPFSFSSSDFS 1127

>CHD8_HUMAN (Q9HCK8) Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD8) (CHD-8) (Helicase with SNF2
            domain 1)
          Length = 2302

 Score = 25.0 bits (53), Expect(2) = 4.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 131  ITGGAAETRSTYARTSNHHHHH 196
            + GGA  +    + T  HHHHH
Sbjct: 2197 VMGGAPSSPHVDSSTMLHHHHH 2218



 Score = 21.9 bits (45), Expect(2) = 4.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 179  NHHHHHMIGRR 211
            +HHHHH  G R
Sbjct: 2223 HHHHHHHPGLR 2233

>NDUA3_BOVIN (Q02371) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit|
           3 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone
           oxidoreductase B9 subunit) (Complex I-B9) (CI-B9)
          Length = 83

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 174 VRAYVDRVSAAPPVIVFKFAVSPRCVCLPAASP 76
           V A++  V A  PV+V  FA++   V LP  SP
Sbjct: 4   VAAFLKNVWAKEPVLVASFAIAGLAVILPTLSP 36

>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 80  DAAGRHTHRGETANLKTITGGAAETR--STYARTSNHHHHH 196
           +A G+  + G  A  ++ +GG + +   S    TS+HHHHH
Sbjct: 187 EAPGKRDYNGPKAEGRSSSGGDSYSGPGSGGPPTSHHHHHH 227

>ZCH14_HUMAN (Q8WYQ9) Zinc finger CCHC domain-containing protein 14 (BDG-29)|
          Length = 949

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 134 TGGAAETRSTYARTSNHHHHH 196
           +GG   T +  A   NHHHHH
Sbjct: 747 SGGGGSTGNIPASNPNHHHHH 767

>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)|
          Length = 434

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
 Frame = +1

Query: 157 IHVRAHQQPP---PPPHDRSTMN 216
           +H  +H++PP   PPPH++S M+
Sbjct: 267 VHPPSHEKPPFVYPPPHEKSPMH 289

>AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 903

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 151 NTIHVRAHQQPPPPPHDRSTM 213
           N +H   HQ PPPPPH  S++
Sbjct: 104 NILH--RHQPPPPPPHSLSSL 122

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 23.9 bits (50), Expect(2) = 7.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 103 PRRDGKFENYYRGRGRNTIHVRAHQQPPPPP 195
           P R+ K  +++  +          QQPPPPP
Sbjct: 731 PGREQKKHHHHHHQQMQQAPAPVPQQPPPPP 761



 Score = 22.3 bits (46), Expect(2) = 7.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 175 QQPPPPPHDRSTMNSDKIPSM 237
           QQ PPPP    +M     P+M
Sbjct: 773 QQQPPPPPPPPSMPQQAAPAM 793

>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 80  DAAGRHTHRGETANLKTITGGAAETR--STYARTSNHHHHH 196
           +A G+  + G  A+ +  +GG + +   S    TS+HHHHH
Sbjct: 187 EAPGKRDYNGPKADGRGSSGGDSYSGPGSGGTPTSHHHHHH 227

>MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein)|
          Length = 4910

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 16   QKGGKVVQQVLY*LKLANLNRGRCRQAHTPRRDG----KFENYYRGRGRNTIHVRAH 174
            QK   +++ V+    L  L   +   + TP   G    +F++Y+  +G NTI  +AH
Sbjct: 998  QKSEAILKPVIEKFTLGRLKNVKSIMSQTPPSPGPDYVQFKHYWMKKGPNTIQEQAH 1054

>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)|
           (Cell division cycle 2-like)
          Length = 952

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 161 TYARTSNHHHHHMIGRR*TAIKFHPWP 241
           +YA    HHH H+ G R    ++H +P
Sbjct: 135 SYAAHHYHHHQHLSGARAAPREYHSYP 161

>CD2L7_CAEEL (P46551) Putative cell division cycle 2-related protein kinase 7|
           (EC 2.7.11.22)
          Length = 730

 Score = 24.3 bits (51), Expect(2) = 9.8
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = +2

Query: 77  GDAAGRHTHRGETANLKTITGGAAETRSTYARTSNHHHHH 196
           G +   H+ R  +            T+S  +   +HHHHH
Sbjct: 644 GSSGSGHSIRATSHPRAPTQPSTTTTKSNGSSNHHHHHHH 683



 Score = 21.6 bits (44), Expect(2) = 9.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 172 HQQPPPPPHDRSTMNS 219
           H  PPPPP  +++  S
Sbjct: 697 HAPPPPPPPTQASSTS 712


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,281,083
Number of Sequences: 219361
Number of extensions: 812828
Number of successful extensions: 4723
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4224
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)