Clone Name | rbart44d01 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_465282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1517 Score = 414 bits (209), Expect = e-112 Identities = 266/285 (93%) Strand = Plus / Minus Query: 155 tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 214 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1315 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 1256 Query: 215 ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1255 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 1196 Query: 275 cttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataat 334 |||| || || ||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 1195 cttcttgacagatagcagcaatatcagcagcactaattttatctggtctggaaacataat 1136 Query: 335 cttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcc 394 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1135 cttccaaatcaacctcatcactcaagttcattttagcagtacagacttggaaaacaagcc 1076 Query: 395 tcttctgcctccgatccggcagagggaactcaattttcctgtcca 439 ||||||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 1075 tcttctgccgacgatctggaagagggaactcgattttcctgtcca 1031
>dbj|AK071476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091H23, full insert sequence Length = 1518 Score = 414 bits (209), Expect = e-112 Identities = 266/285 (93%) Strand = Plus / Minus Query: 155 tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 214 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1315 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 1256 Query: 215 ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1255 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 1196 Query: 275 cttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataat 334 |||| || || ||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 1195 cttcttgacagatagcagcaatatcagcagcactaattttatctggtctggaaacataat 1136 Query: 335 cttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcc 394 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1135 cttccaaatcaacctcatcactcaagttcattttagcagtacagacttggaaaacaagcc 1076 Query: 395 tcttctgcctccgatccggcagagggaactcaattttcctgtcca 439 ||||||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 1075 tcttctgccgacgatctggaagagggaactcgattttcctgtcca 1031
>dbj|AK059237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F02, full insert sequence Length = 1293 Score = 414 bits (209), Expect = e-112 Identities = 266/285 (93%) Strand = Plus / Minus Query: 155 tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 214 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1066 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 1007 Query: 215 ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1006 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 947 Query: 275 cttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataat 334 |||| || || ||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 946 cttcttgacagatagcagcaatatcagcagcactaattttatctggtctggaaacataat 887 Query: 335 cttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcc 394 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 886 cttccaaatcaacctcatcactcaagttcattttagcagtacagacttggaaaacaagcc 827 Query: 395 tcttctgcctccgatccggcagagggaactcaattttcctgtcca 439 ||||||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 826 tcttctgccgacgatctggaagagggaactcgattttcctgtcca 782
>dbj|AB070253.1| Oryza sativa (japonica cultivar-group) OsRPT3 mRNA for 26S proteasome regulatory particle triple-A ATPase subunit3, partial cds Length = 1375 Score = 414 bits (209), Expect = e-112 Identities = 266/285 (93%) Strand = Plus / Minus Query: 155 tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 214 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1114 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 1055 Query: 215 ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1054 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 995 Query: 275 cttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataat 334 |||| || || ||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 994 cttcttgacagatagcagcaatatcagcagcactaattttatctggtctggaaacataat 935 Query: 335 cttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcc 394 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 934 cttccaaatcaacctcatcactcaagttcattttagcagtacagacttggaaaacaagcc 875 Query: 395 tcttctgcctccgatccggcagagggaactcaattttcctgtcca 439 ||||||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 874 tcttctgccgacgatctggaagagggaactcgattttcctgtcca 830
>gb|AY530962.1| Zea mays 26S proteasome regulatory complex ATPase RPT3 mRNA, complete cds Length = 1251 Score = 325 bits (164), Expect = 7e-86 Identities = 257/288 (89%) Strand = Plus / Minus Query: 156 gttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacc 215 |||| ||||||||||||| |||||||||| ||| |||||||| || ||||||||||| || Sbjct: 1068 gttgactcatttgtagaaatcaaagtctgtctcgggcttcttcacgttggttcggtagcc 1009 Query: 216 cttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccagc 275 ||| || ||||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1008 cttttcaaagtccttggggaggatgacatatcggtttttgcggacagcatgcatgccagc 949 Query: 276 ttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataatc 335 || ||||| ||||||| ||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 948 ctcttggcagatagcagcaatatcagcagcactgatcttatccggtctggaaacataatc 889 Query: 336 ttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcct 395 |||||||||||||||||| |||| |||||| || ||||| |||||||| ||||||||||| Sbjct: 888 ttccaaatcaacctcatcgctcaggttcattttggcagtgcaaacttgaaaaacaagcct 829 Query: 396 cttctgcctccgatccggcagagggaactcaattttcctgtccagtct 443 |||||| | ||| || |||||||||||||||||||||||||| ||||| Sbjct: 828 cttctgacgccggtctggcagagggaactcaattttcctgtcaagtct 781
>gb|AY104317.1| Zea mays PCO132144 mRNA sequence Length = 1654 Score = 311 bits (157), Expect = 1e-81 Identities = 257/289 (88%), Gaps = 1/289 (0%) Strand = Plus / Minus Query: 156 gttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacc 215 |||| ||||||||||||| |||||||||| ||| |||||||| || ||||||||||| || Sbjct: 1379 gttgactcatttgtagaaatcaaagtctgtctcgggcttcttcacgttggttcggtagcc 1320 Query: 216 cttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccagc 275 ||| || ||||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1319 cttttcaaagtccttggggaggatgacatatcggtttttgcggacagcatgcatgccagc 1260 Query: 276 ttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataatc 335 || ||||| ||||||| ||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 1259 ctcttggcagatagcagcaatatcagcagcactgatcttatccggtctggaaacataatc 1200 Query: 336 ttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcct 395 |||||||||||||||||| |||| |||||| || ||||| |||||||| ||||||||||| Sbjct: 1199 ttccaaatcaacctcatcgctcaggttcattttggcagtgcaaacttgaaaaacaagcct 1140 Query: 396 cttctgcctccgatccgg-cagagggaactcaattttcctgtccagtct 443 |||||| | ||| || || |||||||||||||||||||||||| ||||| Sbjct: 1139 cttctgacgccggtctggccagagggaactcaattttcctgtcaagtct 1091
>gb|BT016898.1| Zea mays clone Contig731 mRNA sequence Length = 1066 Score = 309 bits (156), Expect = 4e-81 Identities = 255/288 (88%) Strand = Plus / Minus Query: 156 gttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacc 215 |||||||||||||||||| || ||||| | ||||||||| || || ||||||||||| || Sbjct: 397 gttgcctcatttgtagaaatcgaagtccgtctcaggctttttcacgttggttcggtagcc 338 Query: 216 cttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccagc 275 |||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 337 cttctcaaagtccttggggaggatgacatatcggtttttgcggacagcatgcatgccagc 278 Query: 276 ttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataatc 335 ||| || || ||||||| ||||||||||||||||| ||||| |||||||| ||||| || Sbjct: 277 ttcttgacagatagcagcaatatcagcagcactgatcttatccggtctggaaacatagtc 218 Query: 336 ttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcct 395 ||||||||||||||| ||||||| |||||| || ||||| || ||||||||||||||||| Sbjct: 217 ttccaaatcaacctcgtcactcaggttcattttggcagtgcagacttggaaaacaagcct 158 Query: 396 cttctgcctccgatccggcagagggaactcaattttcctgtccagtct 443 |||||| | ||| || |||| ||||||||||||||||||||| ||||| Sbjct: 157 cttctgacgccggtctggcaaagggaactcaattttcctgtcaagtct 110
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 218 bits (110), Expect = 1e-53 Identities = 131/138 (94%) Strand = Plus / Minus Query: 155 tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 214 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 13062628 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 13062569 Query: 215 ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 13062568 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 13062509 Query: 275 cttcctggcaaatagcag 292 |||| || || ||||||| Sbjct: 13062508 cttcttgacagatagcag 13062491 Score = 133 bits (67), Expect = 5e-28 Identities = 85/91 (93%) Strand = Plus / Minus Query: 297 atcagcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcact 356 |||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 13061702 atcagcagcactaattttatctggtctggaaacataatcttccaaatcaacctcatcact 13061643 Query: 357 caagttcatcttagcagtacaaacttggaaa 387 ||||||||| ||||||||||| || |||||| Sbjct: 13061642 caagttcattttagcagtacagacctggaaa 13061612 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 379 acttggaaaacaagcctcttctgcctccgatccggcagagggaactcaattttcctgtcc 438 ||||||||||||||||||||||||| ||||| || ||||||||||| |||||||||||| Sbjct: 13060637 acttggaaaacaagcctcttctgccgacgatctggaagagggaactcgattttcctgtcc 13060578 Query: 439 a 439 | Sbjct: 13060577 a 13060577
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 218 bits (110), Expect = 1e-53 Identities = 131/138 (94%) Strand = Plus / Minus Query: 155 tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 214 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 39205 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 39146 Query: 215 ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 39145 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 39086 Query: 275 cttcctggcaaatagcag 292 |||| || || ||||||| Sbjct: 39085 cttcttgacagatagcag 39068 Score = 133 bits (67), Expect = 5e-28 Identities = 85/91 (93%) Strand = Plus / Minus Query: 297 atcagcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcact 356 |||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 38279 atcagcagcactaattttatctggtctggaaacataatcttccaaatcaacctcatcact 38220 Query: 357 caagttcatcttagcagtacaaacttggaaa 387 ||||||||| ||||||||||| || |||||| Sbjct: 38219 caagttcattttagcagtacagacctggaaa 38189 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 379 acttggaaaacaagcctcttctgcctccgatccggcagagggaactcaattttcctgtcc 438 ||||||||||||||||||||||||| ||||| || ||||||||||| |||||||||||| Sbjct: 37214 acttggaaaacaagcctcttctgccgacgatctggaagagggaactcgattttcctgtcc 37155 Query: 439 a 439 | Sbjct: 37154 a 37154
>gb|BT012705.1| Lycopersicon esculentum clone 113583F, mRNA sequence Length = 1608 Score = 161 bits (81), Expect = 2e-36 Identities = 177/209 (84%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| |||||||| | ||||||||| || |||||||||||||| || ||||| ||| Sbjct: 1269 ggcttcttcacattggtcctgtaacccttttcaaagtccttggggagtatgacatatcga 1210 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 309 || || || || |||||||| || |||||||| || ||||| | || ||||||||||| Sbjct: 1209 ttctttcgcactgcatgcatacctgcttcctgacatatagctgcaatctcagcagcacta 1150 Query: 310 attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 369 ||||||||||| | || |||||||||||||| |||||||| |||| |||||||||||| Sbjct: 1149 attttatcagggcgagaaacataatcttccaagtcaacctcgtcacctaagttcatctta 1090 Query: 370 gcagtacaaacttggaaaacaagcctctt 398 |||||||| || || |||||||||||||| Sbjct: 1089 gcagtacagacctgaaaaacaagcctctt 1061
>emb|AJ006095.1|CAR6095 Cicer arietinum mRNA for putative 26S protease regulatory subunit 6, partial Length = 763 Score = 155 bits (78), Expect = 1e-34 Identities = 219/266 (82%) Strand = Plus / Minus Query: 166 ttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacccttctcgaag 225 ||||| || |||||||| | ||||||||||| ||||| || | |||||||||||||||| Sbjct: 531 ttgtaaaattcaaagtccgtatcaggcttcttcacatttgtcctgtaacccttctcgaag 472 Query: 226 tccttggggaggataacataccgatttttgcggacagcatgcatgccagcttcctggcaa 285 ||||| || || || ||||| | ||| || || ||||||||||| || ||||| || ||| Sbjct: 471 tccttcggcagtatgacatatctattcttacgaacagcatgcattcctgcttcttgacaa 412 Query: 286 atagcagtgatatcagcagcactgattttatcaggtctggagacataatcttccaaatca 345 ||||||| || ||||||||||| ||||| ||||| | ||| |||||||| |||| || Sbjct: 411 atagcagatatctcagcagcactaattttgtcaggacgggaaacataatcctccaggtcc 352 Query: 346 acctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcctcttctgcctc 405 |||||||||||||||||||| || || || ||||| || || ||||||||||| |||| Sbjct: 351 acctcatcactcaagttcattttggctgtgcaaacctgaaatacaagcctcttttgccgt 292 Query: 406 cgatccggcagagggaactcaatttt 431 | ||| |||| ||||||||||||||| Sbjct: 291 ctatcaggcaaagggaactcaatttt 266
>gb|U43398.1|STU43398 Solanum tuberosum POTATP1 mRNA, complete cds Length = 1473 Score = 155 bits (78), Expect = 1e-34 Identities = 174/206 (84%) Strand = Plus / Minus Query: 166 ttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacccttctcgaag 225 |||||||| |||||||| | ||||||||||| || || || | ||||||||| || ||| Sbjct: 1260 ttgtagaattcaaagtcagtgtcaggcttcttcacgtttgtcctgtaacccttttcaaag 1201 Query: 226 tccttggggaggataacataccgatttttgcggacagcatgcatgccagcttcctggcaa 285 ||||| || ||||| ||||| ||||| ||||| || |||||||| |||||||| || || Sbjct: 1200 tcctttggaaggatgacatatcgattcttgcgcactgcatgcataccagcttcttgacag 1141 Query: 286 atagcagtgatatcagcagcactgattttatcaggtctggagacataatcttccaaatca 345 ||||| || || ||||||||||||||||||||||| | || |||||||||||||| ||| Sbjct: 1140 atagccgtaatctcagcagcactgattttatcagggcgagaaacataatcttccaagtca 1081 Query: 346 acctcatcactcaagttcatcttagc 371 |||||||||| |||||||||||||| Sbjct: 1080 acctcatcacctaagttcatcttagc 1055
>gb|AY112326.1| Zea mays CL40761_1 mRNA sequence Length = 1098 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 297 atcagcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcact 356 ||||| ||||||||| ||||| |||||| | |||||||||||||||||| |||||||||| Sbjct: 575 atcagtagcactgatcttatccggtctgcaaacataatcttccaaatcagcctcatcact 634 Query: 357 caagttcatcttagcagta 375 ||| | ||||||||||||| Sbjct: 635 caaatccatcttagcagta 653
>ref|NM_125214.4| Arabidopsis thaliana RPT3; ATPase AT5G58290 (RPT3) mRNA, complete cds Length = 1518 Score = 89.7 bits (45), Expect = 7e-15 Identities = 168/209 (80%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| ||||| | ||||| ||||||||||| ||||| || || || ||||| | Sbjct: 1276 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1217 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 309 || || || || |||||||| ||||||||||||||||| || | || |||||||| || Sbjct: 1216 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1157 Query: 310 attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 369 ||||||||||| | || ||||| |||||||| ||||||||||| || | |||||| || Sbjct: 1156 attttatcaggccgtgaaacatagtcttccaagtcaacctcatcgctaaggttcattttg 1097 Query: 370 gcagtacaaacttggaaaacaagcctctt 398 | || || || ||||||||||||||||| Sbjct: 1096 gaggtgcatacctggaaaacaagcctctt 1068
>gb|BT020373.1| Arabidopsis thaliana At5g58290 gene, complete cds Length = 1227 Score = 89.7 bits (45), Expect = 7e-15 Identities = 168/209 (80%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| ||||| | ||||| ||||||||||| ||||| || || || ||||| | Sbjct: 1199 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1140 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 309 || || || || |||||||| ||||||||||||||||| || | || |||||||| || Sbjct: 1139 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1080 Query: 310 attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 369 ||||||||||| | || ||||| |||||||| ||||||||||| || | |||||| || Sbjct: 1079 attttatcaggccgtgaaacatagtcttccaagtcaacctcatcgctaaggttcattttg 1020 Query: 370 gcagtacaaacttggaaaacaagcctctt 398 | || || || ||||||||||||||||| Sbjct: 1019 gaggtgcatacctggaaaacaagcctctt 991
>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 1950 Score = 89.7 bits (45), Expect = 7e-15 Identities = 168/209 (80%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| ||||| | ||||| ||||||||||| ||||| || || || ||||| | Sbjct: 1715 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1656 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 309 || || || || |||||||| ||||||||||||||||| || | || |||||||| || Sbjct: 1655 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1596 Query: 310 attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 369 ||||||||||| | || ||||| |||||||| ||||||||||| || | |||||| || Sbjct: 1595 attttatcaggccgtgaaacatagtcttccaagtcaacctcatcgctaaggttcattttg 1536 Query: 370 gcagtacaaacttggaaaacaagcctctt 398 | || || || ||||||||||||||||| Sbjct: 1535 gaggtgcatacctggaaaacaagcctctt 1507
>gb|AF123392.1|AF123392 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, complete cds Length = 1301 Score = 89.7 bits (45), Expect = 7e-15 Identities = 168/209 (80%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| ||||| | ||||| ||||||||||| ||||| || || || ||||| | Sbjct: 1240 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1181 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 309 || || || || |||||||| ||||||||||||||||| || | || |||||||| || Sbjct: 1180 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1121 Query: 310 attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 369 ||||||||||| | || ||||| |||||||| ||||||||||| || | |||||| || Sbjct: 1120 attttatcaggccgtgaaacatagtcttccaagtcaacctcatcgctaaggttcattttg 1061 Query: 370 gcagtacaaacttggaaaacaagcctctt 398 | || || || ||||||||||||||||| Sbjct: 1060 gaggtgcatacctggaaaacaagcctctt 1032
>dbj|AK174288.1| Ciona intestinalis cDNA, clone:cicl025a20, full insert sequence Length = 1481 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 241 acataccgatttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatca 300 |||||||| |||| || || ||| ||||||| ||||| |||||||| ||| | |||||| Sbjct: 1226 acataccggttttcacgaactgcaagcatgcctgcttcttggcaaattgcatttatatca 1167 Query: 301 gcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcactcaag 360 ||| || ||||||| |||||||||| ||||||||||||||||| || ||||| || | | Sbjct: 1166 gcaccagtgattttgtcaggtctggcaacataatcttccaaatccacttcatcgctgagg 1107 Query: 361 ttcatctt 368 |||||||| Sbjct: 1106 ttcatctt 1099
>dbj|AK117042.1| Ciona intestinalis cDNA, clone:cits021e02, full insert sequence Length = 1474 Score = 79.8 bits (40), Expect = 7e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 241 acataccgatttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatca 300 |||||||| |||| || || ||| ||||||| ||||| |||||||| ||| | |||||| Sbjct: 1219 acataccggttttcacgaactgcaagcatgcctgcttcttggcaaattgcatttatatca 1160 Query: 301 gcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcactcaag 360 ||| || ||||||| ||||||| || ||||||||||||||||| || ||||| || | | Sbjct: 1159 gcaccagtgattttgtcaggtcgggcaacataatcttccaaatccacttcatcgctgagg 1100 Query: 361 ttcatctt 368 |||||||| Sbjct: 1099 ttcatctt 1092
>emb|BX831143.1|CNS09ZD2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 75.8 bits (38), Expect = 1e-10 Identities = 168/210 (80%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| ||||| | ||||| ||||||||||| ||||| || || || ||||| | Sbjct: 1250 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1191 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 309 || || || || |||||||| ||||||||||||||||| || | || |||||||| || Sbjct: 1190 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1131 Query: 310 attttatcaggtctggagac-ataatcttccaaatcaacctcatcactcaagttcatctt 368 ||||||||||| | || || ||| |||||||| ||||||||||| || | |||||| || Sbjct: 1130 attttatcaggccgtgaaacgatagtcttccaagtcaacctcatcgctaaggttcatttt 1071 Query: 369 agcagtacaaacttggaaaacaagcctctt 398 | || || || ||||||||||||||||| Sbjct: 1070 ggaggtgcatacctggaaaacaagcctctt 1041
>emb|BX831136.1|CNS09ZEE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1414 Score = 75.8 bits (38), Expect = 1e-10 Identities = 168/210 (80%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| ||||| | ||||| ||||||||||| ||||| || || || ||||| | Sbjct: 1230 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1171 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 309 || || || || |||||||| ||||||||||||||||| || | || |||||||| || Sbjct: 1170 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1111 Query: 310 attttatcaggtctggagac-ataatcttccaaatcaacctcatcactcaagttcatctt 368 ||||||||||| | || || ||| |||||||| ||||||||||| || | |||||| || Sbjct: 1110 attttatcaggccgtgaaacgatagtcttccaagtcaacctcatcgctaaggttcatttt 1051 Query: 369 agcagtacaaacttggaaaacaagcctctt 398 | || || || ||||||||||||||||| Sbjct: 1050 ggaggtgcatacctggaaaacaagcctctt 1021
>emb|BX831437.1|CNS09ZEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1389 Score = 75.8 bits (38), Expect = 1e-10 Identities = 168/210 (80%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| ||||| | ||||| ||||||||||| ||||| || || || ||||| | Sbjct: 1305 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1246 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 309 || || || || |||||||| ||||||||||||||||| || | || |||||||| || Sbjct: 1245 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1186 Query: 310 attttatcaggtctggagac-ataatcttccaaatcaacctcatcactcaagttcatctt 368 ||||||||||| | ||||| ||| |||||||| ||||||||||| || | |||||| || Sbjct: 1185 attttatcaggccgtgagacgatagtcttccaagtcaacctcatcgctaaggttcatttt 1126 Query: 369 agcagtacaaacttggaaaacaagcctctt 398 | || || || |||||||| |||||||| Sbjct: 1125 ggaggtgcatacctggaaaacgagcctctt 1096
>ref|XM_662535.1| Cryptosporidium hominis TU502 26S proteasome AAA-ATPase subunit RPT3 (Chro.40284) partial mRNA Length = 1206 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 310 attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 369 ||||| || |||||||||||||| ||||| | |||||| || ||||||||||||||||| Sbjct: 1055 attttttctggtctggagacatattcttcaagatcaacttcttcactcaagttcatcttt 996 Query: 370 gcagta 375 |||||| Sbjct: 995 gcagta 990
>ref|XM_625842.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit 26b like AAA ATpase (cgd4_2540), partial mRNA Length = 1206 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 310 attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 369 ||||| || |||||||||||||| ||||| | |||||| || ||||||||||||||||| Sbjct: 1055 attttttctggtctggagacatattcttcaagatcaacttcttcactcaagttcatcttt 996 Query: 370 gcagta 375 |||||| Sbjct: 995 gcagta 990
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| ||||| | ||||| ||||||||||| ||||| || || || ||||| | Sbjct: 44216 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 44157 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaat 287 || || || || |||||||| ||||||||||||||||| Sbjct: 44156 ttctttcgcaccgcatgcataccagcttcctggcaaat 44119 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 298 tcagcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatc 353 |||||||| || ||||||||||| | || ||||| |||||||| ||||||||||| Sbjct: 43785 tcagcagcgctaattttatcaggccgtgaaacatagtcttccaagtcaacctcatc 43730
>gb|AY431597.1| Aedes aegypti ASAP ID: 36999 proteasome regulatory particle subunit mRNA sequence Length = 1252 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 244 taccgatttttgcggacagcatgcatgccagcttcctggcaaatagcagtgat 296 |||| ||||| ||| ||||| ||||||||||||||||| ||||| ||| |||| Sbjct: 1181 tacctattttcgcgcacagcgtgcatgccagcttcctgacaaattgcattgat 1129
>gb|AC147002.20| Medicago truncatula clone mth2-151m16, complete sequence Length = 128621 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 301 gcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcactcaag 360 |||||||| ||||| ||||| | ||| ||||||||||||| || || ||||||||||| Sbjct: 6321 gcagcactaattttgtcagggcgggaaacataatcttccaggtccacttcatcactcaaa 6380 Query: 361 ttcat 365 ||||| Sbjct: 6381 ttcat 6385 Score = 46.1 bits (23), Expect = 0.097 Identities = 83/103 (80%) Strand = Plus / Plus Query: 190 ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 249 |||||||| || ||||| | ||||| ||||| |||||||| || || || ||||| | | Sbjct: 5605 ggcttcttcacgttggtcctataacctttctcaaagtcctttggtagtatgacatatcta 5664 Query: 250 tttttgcggacagcatgcatgccagcttcctggcaaatagcag 292 || || || ||||||||||| || ||||| || |||||||||| Sbjct: 5665 ttcttacgaacagcatgcattcctgcttcttgacaaatagcag 5707
>ref|XM_643629.1| Entamoeba histolytica HM-1:IMSS 26s proteasome subunit P45 family protein (402.t00003) partial mRNA Length = 1170 Score = 46.1 bits (23), Expect = 0.097 Identities = 50/59 (84%) Strand = Plus / Minus Query: 262 gcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactgattttatcagg 320 |||||||| |||||||| || ||||||| || || || ||| |||||||||||||||| Sbjct: 1070 gcatgcataccagcttcttgacaaatagaagctatttctgcaccactgattttatcagg 1012
>gb|AY609898.1| Sus scrofa clone Clu_40992.scr.msk.p1.Contig1, mRNA sequence Length = 1412 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 328 acataatcttccaaatcaacctc 350 ||||||||||||||||||||||| Sbjct: 1131 acataatcttccaaatcaacctc 1109
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gggaactcaattttcctgtccagtct 443 |||||||||||||||||||| ||||| Sbjct: 1145024 gggaactcaattttcctgtcaagtct 1144999
>ref|NM_211296.1| Eremothecium gossypii AFR394Wp (AFR394W), mRNA Length = 1419 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gggaactcaattttcctgtccagtct 443 |||||||||||||||||||| ||||| Sbjct: 1139 gggaactcaattttcctgtcaagtct 1114
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 262797 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 ggcagagggaactcaattttcctgtc 437 ||||||||||||||||| |||||||| Sbjct: 201203 ggcagagggaactcaatcttcctgtc 201228
>emb|BX067091.1|CNS09NXJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50CE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 832 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 165 gtaacccttctcgaagtcctt 185
>emb|BX064829.1|CNS09M6P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC48BH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 655 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 173 gtaacccttctcgaagtcctt 193
>emb|BX064588.1|CNS09M00 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC46DG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 522 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 174 gtaacccttctcgaagtcctt 194
>emb|BX057192.1|CNS09GAK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC37AB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 379 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 178 gtaacccttctcgaagtcctt 198
>emb|BX048935.1|CNS099X7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24BG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 153 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 117 gtaacccttctcgaagtcctt 137
>emb|BX047011.1|CNS098FR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC20DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 127 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 92 gtaacccttctcgaagtcctt 112
>emb|BX031109.1|CNS08W61 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA46BG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 794 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 178 gtaacccttctcgaagtcctt 198
>emb|BX030223.1|CNS08VHF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA45AE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 138 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 114 gtaacccttctcgaagtcctt 134
>emb|Z38135.1|MSDBATPMR M.sexta mRNA for DEAD-box ATPase Length = 1341 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 agagggaactcaattttcctgtcca 439 |||||||||||||||||||| |||| Sbjct: 1027 agagggaactcaattttcctatcca 1003
>gb|AC087269.5| Homo sapiens chromosome 8, clone RP11-211C9, complete sequence Length = 187924 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 aacctcatcactcaagttcat 365 ||||||||||||||||||||| Sbjct: 159050 aacctcatcactcaagttcat 159070
>gb|AC154832.2| Mus musculus BAC clone RP24-568D4 from chromosome 14, complete sequence Length = 134900 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gtagaaaataaagcatcctct 146 ||||||||||||||||||||| Sbjct: 99844 gtagaaaataaagcatcctct 99864
>ref|XM_311871.2| Anopheles gambiae str. PEST ENSANGP00000023984 (ENSANGG00000015165), partial mRNA Length = 1374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 1197 gtaacccttctcgaagtcctt 1177
>ref|XM_311870.2| Anopheles gambiae str. PEST ENSANGP00000017654 (ENSANGG00000015165), partial mRNA Length = 1449 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 gtaacccttctcgaagtcctt 230 ||||||||||||||||||||| Sbjct: 1272 gtaacccttctcgaagtcctt 1252
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 279 ctggcaaatagcagtgatatcagcagcactga 310 ||||||||| |||||||||||||| |||||| Sbjct: 2242 ctggcaaatctcagtgatatcagcaccactga 2211
>ref|NM_103934.3| Arabidopsis thaliana unknown protein AT1G50510 mRNA, complete cds Length = 1363 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aatagcagtgatatcagcag 304 |||||||||||||||||||| Sbjct: 630 aatagcagtgatatcagcag 649
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 279 ctggcaaatagcagtgatatcagcagcactga 310 ||||||||| |||||||||||||| |||||| Sbjct: 44321 ctggcaaatctcagtgatatcagcaccactga 44352
>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence Length = 205094 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 atgcatgccagcttcctggc 283 |||||||||||||||||||| Sbjct: 100096 atgcatgccagcttcctggc 100077
>gb|AC091991.2| Homo sapiens chromosome 5 clone RP11-86C20, complete sequence Length = 170219 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ttgttgcctcatttgtagaagtca 177 ||||| |||||||||||||||||| Sbjct: 129683 ttgtttcctcatttgtagaagtca 129660
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 279 ctggcaaatagcagtgatatcagcagcactga 310 ||||||||| |||||||||||||| |||||| Sbjct: 2198 ctggcaaatctcagtgatatcagcaccactga 2167
>gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170004 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 gcagagggaactcaattttc 432 |||||||||||||||||||| Sbjct: 25479 gcagagggaactcaattttc 25460
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 279 ctggcaaatagcagtgatatcagcagcactga 310 ||||||||| |||||||||||||| |||||| Sbjct: 2232 ctggcaaatctcagtgatatcagcaccactga 2201
>dbj|AK222120.1| Arabidopsis thaliana mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL22-93-G21 Length = 697 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 279 ctggcaaatagcagtgatatcagcagcactga 310 ||||||||| |||||||||||||| |||||| Sbjct: 132 ctggcaaatctcagtgatatcagcaccactga 101
>gb|AC010244.6| Homo sapiens chromosome 5 clone CTC-364B20, complete sequence Length = 134937 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ttgttgcctcatttgtagaagtca 177 ||||| |||||||||||||||||| Sbjct: 14573 ttgtttcctcatttgtagaagtca 14596
>emb|BX814123.1|CNS0AEBL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1265 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aatagcagtgatatcagcag 304 |||||||||||||||||||| Sbjct: 612 aatagcagtgatatcagcag 631
>emb|BX814920.1|CNS0AE2A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZA11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1276 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aatagcagtgatatcagcag 304 |||||||||||||||||||| Sbjct: 583 aatagcagtgatatcagcag 602
>emb|BX841857.1|CNS09Y38 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aatagcagtgatatcagcag 304 |||||||||||||||||||| Sbjct: 630 aatagcagtgatatcagcag 649
>gb|AC079279.4|AC079279 Arabidopsis thaliana chromosome 1 BAC F17J6 genomic sequence, complete sequence Length = 92745 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aatagcagtgatatcagcag 304 |||||||||||||||||||| Sbjct: 18795 aatagcagtgatatcagcag 18814
>gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168134 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 gcagagggaactcaattttc 432 |||||||||||||||||||| Sbjct: 58789 gcagagggaactcaattttc 58808
>gb|BT004358.1| Arabidopsis thaliana clone U20176 unknown protein (At1g50510) mRNA, complete cds Length = 1024 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aatagcagtgatatcagcag 304 |||||||||||||||||||| Sbjct: 528 aatagcagtgatatcagcag 547
>gb|BT002789.1| Arabidopsis thaliana clone RAFL15-04-J16 (R20176) unknown protein (At1g50510) mRNA, complete cds Length = 1225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aatagcagtgatatcagcag 304 |||||||||||||||||||| Sbjct: 616 aatagcagtgatatcagcag 635
>gb|AC012561.2|AC012561 Arabidopsis thaliana chromosome I BAC F11F12 genomic sequence, complete sequence Length = 105733 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 aatagcagtgatatcagcag 304 |||||||||||||||||||| Sbjct: 58974 aatagcagtgatatcagcag 58955
>emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chromosome X, complete sequence Length = 227133 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ccagcttcctggcaaatagc 290 |||||||||||||||||||| Sbjct: 202096 ccagcttcctggcaaatagc 202077
>emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in linkage group 18, complete sequence Length = 167352 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 aaatagcagtgatatcagca 303 |||||||||||||||||||| Sbjct: 148042 aaatagcagtgatatcagca 148061
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 279 ctggcaaatagcagtgatatcagcagcactga 310 ||||||||| |||||||||||||| |||||| Sbjct: 2181 ctggcaaatctcagtgatatcagcaccactga 2150
>gb|AC170747.3| Loxodonta africana clone VMRC15-542O23, complete sequence Length = 42459 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttagcaaggatggtgagact 35 |||||||||||||||||||| Sbjct: 13680 ttagcaaggatggtgagact 13699 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,032,362 Number of Sequences: 3902068 Number of extensions: 4032362 Number of successful extensions: 70687 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70536 Number of HSP's gapped (non-prelim): 133 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)