>DNL1_MOUSE (P37913) DNA ligase 1 (EC 6.5.1.1) (DNA ligase I)|
           (Polydeoxyribonucleotide synthase [ATP] 1)
          Length = 916

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
 Frame = +2

Query: 224 RNATPTKSASPLVSNTNAKATHSLSCSCQEEDICTGR------ISQVDRREDERPNTCSE 385
           RN    +S SP V  T  K    LSC  ++ED   G       +S  ++     P+TC E
Sbjct: 42  RNQVVPESDSP-VKRTGRKVAQVLSCEGEDEDEAPGTPKVQKPVSDSEQSSPPSPDTCPE 100

Query: 386 SAQAWR*SLGTCTPPEAYQR 445
           ++  +  S      P  + +
Sbjct: 101 NSPVFNCSSPMDISPSGFPK 120


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,342,020
Number of Sequences: 219361
Number of extensions: 1400725
Number of successful extensions: 3251
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)