ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart44c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAb0050G15, complete sequence Length = 126156 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcattcggtcgccttcaaagtcttcatatagaaata 459 |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 113058 actcccatgggacatcgccaacaagcattcggtcgccctcaaaatcttcatatagaaata 112999 Query: 460 tgaaattgtcactatttgcacaatct 485 |||| | |||||| || ||||||||| Sbjct: 112998 tgaactcgtcacttttagcacaatct 112973
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcattcggtcgccttcaaagtcttcatatagaaata 459 |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 46902 actcccatgggacatcgccaacaagcattcggtcgccctcaaaatcttcatatagaaata 46843 Query: 460 tgaaattgtcactatttgcacaatct 485 |||| | |||||| || ||||||||| Sbjct: 46842 tgaactcgtcacttttagcacaatct 46817
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcattcggtcgccttcaaagtcttcatatagaaata 459 |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 6263624 actcccatgggacatcgccaacaagcattcggtcgccctcaaaatcttcatatagaaata 6263565 Query: 460 tgaaattgtcactatttgcacaatct 485 |||| | |||||| || ||||||||| Sbjct: 6263564 tgaactcgtcacttttagcacaatct 6263539
>dbj|AK102073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082G16, full insert sequence Length = 2984 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcattcggtcgccttcaaagtcttcatatagaaata 459 |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 2118 actcccatgggacatcgccaacaagcattcggtcgccctcaaaatcttcatatagaaata 2059 Query: 460 tgaaattgtcactatttgcacaatct 485 |||| | |||||| || ||||||||| Sbjct: 2058 tgaactcgtcacttttagcacaatct 2033
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcattcggtcgccttcaaagtcttcatatagaaata 459 |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 6330091 actcccatgggacatcgccaacaagcattcggtcgccctcaaaatcttcatatagaaata 6330032 Query: 460 tgaaattgtcactatttgcacaatct 485 |||| | |||||| || ||||||||| Sbjct: 6330031 tgaactcgtcacttttagcacaatct 6330006
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 390 gcaagaaacaactcccatgggacatctccaacaagcat 427 |||| ||||| |||||||||||| |||||||||||||| Sbjct: 690 gcaacaaacatctcccatgggacgtctccaacaagcat 653
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 396 aacaactcccatgggacatctccaacaagcattcggtcgcc 436 |||| |||||| |||||||||||||||||||| | |||||| Sbjct: 68 aacatctcccaggggacatctccaacaagcatccagtcgcc 28
>emb|CR792429.5| Zebrafish DNA sequence from clone DKEY-257J3 in linkage group 12, complete sequence Length = 163868 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 419 aacaagcattcggtcgccttcaaa 442 |||||||||||||||||||||||| Sbjct: 15257 aacaagcattcggtcgccttcaaa 15280
>gb|AY087635.1| Arabidopsis thaliana clone 37274 mRNA, complete sequence Length = 1403 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 ctcccatgggacatctccaacaagcat 427 ||||||||||||||| ||||||||||| Sbjct: 1090 ctcccatgggacatcgccaacaagcat 1064
>gb|AC099673.2| Homo sapiens chromosome 1 clone RP11-109H10, complete sequence Length = 193749 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 catatataatgtgtacgtatat 165 |||||||||||||||||||||| Sbjct: 176298 catatataatgtgtacgtatat 176319
>gb|AC099335.2| Homo sapiens chromosome 1 clone RP11-104D3, complete sequence Length = 157665 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 catatataatgtgtacgtatat 165 |||||||||||||||||||||| Sbjct: 31133 catatataatgtgtacgtatat 31154
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 tcccatgggacatctccaacaagcat 427 |||||||| ||||||||||||||||| Sbjct: 1153 tcccatggtacatctccaacaagcat 1128
>dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-36B5, complete sequence Length = 148490 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 atacaccacaacaaactgttcacatctaac 84 ||||||| ||||||||||||||| |||||| Sbjct: 115821 atacacctcaacaaactgttcacttctaac 115850
>dbj|AB017651.2| Homo sapiens genomic DNA, chromosome 11q23.2, clone:KB615C6, complete sequence Length = 131668 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 atacaccacaacaaactgttcacatctaac 84 ||||||| ||||||||||||||| |||||| Sbjct: 13778 atacacctcaacaaactgttcacttctaac 13807
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 tcccatgggacatctccaacaagcat 427 ||||| |||||||||||||||||||| Sbjct: 1357 tcccaagggacatctccaacaagcat 1332
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 tcccatgggacatctccaacaagcat 427 |||||||| ||||||||||||||||| Sbjct: 534 tcccatggcacatctccaacaagcat 509
>ref|NM_115268.2| Arabidopsis thaliana unknown protein AT3G54080 mRNA, complete cds Length = 1756 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ttgcttcgtcatgacctttgg 342 ||||||||||||||||||||| Sbjct: 985 ttgcttcgtcatgacctttgg 1005
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.2 mRNA, complete cds Length = 1531 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||| || ||||||||||||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcat 1159
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.1 mRNA, complete cds Length = 1537 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||| || ||||||||||||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcat 1159
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| || ||| |||||||||||||||||||| Sbjct: 718 aaacatctgccacgggacatctccaacaagcat 686
>gb|AC147382.3| Pan troglodytes BAC clone RP43-171M24 from 7, complete sequence Length = 198872 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agagatgtgcatatataatgtgtac 159 |||||||||||||| |||||||||| Sbjct: 147452 agagatgtgcatatttaatgtgtac 147428
>gb|AC146098.3| Pan troglodytes BAC clone RP43-51J12 from 7, complete sequence Length = 195811 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agagatgtgcatatataatgtgtac 159 |||||||||||||| |||||||||| Sbjct: 13510 agagatgtgcatatttaatgtgtac 13486
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||||||||| || |||||||| Sbjct: 294 aaacatctcccatgggacatcaccgacaagcat 262
>gb|AC166550.2| Nectria haematococca clone JGIAYWI-9G7, complete sequence Length = 45496 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 atttgcacaatctccctcccc 493 ||||||||||||||||||||| Sbjct: 27973 atttgcacaatctccctcccc 27953
>gb|AC096752.4| Homo sapiens BAC clone RP11-454E2 from 7, complete sequence Length = 131629 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 agagatgtgcatatataatgtgtac 159 |||||||||||||| |||||||||| Sbjct: 116117 agagatgtgcatatttaatgtgtac 116141
>ref|XM_736517.1| Plasmodium chabaudi chabaudi hypothetical protein (PC001075.02.0) partial mRNA Length = 2121 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 agttcttcttttttcattatc 235 ||||||||||||||||||||| Sbjct: 1856 agttcttcttttttcattatc 1836
>gb|AC004879.2| Homo sapiens PAC clone RP4-755G17 from 7, complete sequence Length = 134904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 gagcaatgcataattttttag 384 ||||||||||||||||||||| Sbjct: 87294 gagcaatgcataattttttag 87314
>gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, partial cds Length = 291 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||| ||||| ||||||||||| Sbjct: 201 aaacatctcccatggaacatcaccaacaagcat 169
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||| || ||||||||||||||||| Sbjct: 1163 aaacatctcccacggaacatctccaacaagcat 1131
>gb|AY113933.1| Arabidopsis thaliana unknown protein (At3g54080) mRNA, complete cds Length = 1084 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ttgcttcgtcatgacctttgg 342 ||||||||||||||||||||| Sbjct: 855 ttgcttcgtcatgacctttgg 875
>gb|AF370199.1| Arabidopsis thaliana unknown protein (At3g54080) mRNA, complete cds Length = 1376 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ttgcttcgtcatgacctttgg 342 ||||||||||||||||||||| Sbjct: 985 ttgcttcgtcatgacctttgg 1005
>emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, BAC clone F24B22 Length = 100285 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ttgcttcgtcatgacctttgg 342 ||||||||||||||||||||| Sbjct: 11353 ttgcttcgtcatgacctttgg 11373
>gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mRNA, partial cds Length = 990 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||| ||||| ||||||||||| Sbjct: 492 aaacatctcccatggaacatcaccaacaagcat 460
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||||||||| || ||||||||||| Sbjct: 744 aaacatctcccatgggacgtcaccaacaagcat 712
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||| || ||||||||||||||||| Sbjct: 918 aaacatctcccacggaacatctccaacaagcat 886
>gb|AC009088.9| Homo sapiens chromosome 16 clone RP11-388M20, complete sequence Length = 127769 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 atatataatgtgtacgtatat 165 ||||||||||||||||||||| Sbjct: 126332 atatataatgtgtacgtatat 126312
>emb|BX824641.1|CNS0A5HT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1279 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ttgcttcgtcatgacctttgg 342 ||||||||||||||||||||| Sbjct: 939 ttgcttcgtcatgacctttgg 959
>gb|AC093520.4| Homo sapiens chromosome 16 clone RP11-120K18, complete sequence Length = 168064 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 atatataatgtgtacgtatat 165 ||||||||||||||||||||| Sbjct: 166964 atatataatgtgtacgtatat 166984
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||| || ||||||||||||||||| Sbjct: 1195 aaacatctcccacggaacatctccaacaagcat 1163
>gb|AC091167.19| Homo sapiens chromosome 15, clone RP11-697E2, complete sequence Length = 202381 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 aagtcttcatatagaaatatg 461 ||||||||||||||||||||| Sbjct: 166886 aagtcttcatatagaaatatg 166866
>gb|AC157097.5| Mus musculus 6 BAC RP24-369M3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206335 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 tatagaaatatgaaattgtca 470 ||||||||||||||||||||| Sbjct: 11089 tatagaaatatgaaattgtca 11109
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||| |||||||||||||| ||||| Sbjct: 379 aaacatctcccaagggacatctccaaccagcat 347
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| || ||| |||||||||||||||||||| Sbjct: 770 aaacatctgccacgggacatctccaacaagcat 738
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||| ||||| ||||||||||| Sbjct: 786 aaacatctcccatggaacatcgccaacaagcat 754
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||| ||||| ||||||||||| Sbjct: 777 aaacatctcccatggaacatcgccaacaagcat 745
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||| ||||| ||||||||||| Sbjct: 757 aaacatctcccatggaacatcgccaacaagcat 725
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| || ||| |||||||||||||||||||| Sbjct: 780 aaacatctgccacgggacatctccaacaagcat 748
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||| ||||| ||||||||||| Sbjct: 843 aaacatctcccatggaacatcgccaacaagcat 811
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| || ||| |||||||||||||||||||| Sbjct: 43 aaacatctgccacgggacatctccaacaagcat 11
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| || ||| |||||||||||||||||||| Sbjct: 775 aaacatctgccacgggacatctccaacaagcat 743
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||| || ||||||||||||||||| Sbjct: 1151 aaacatctcccacggaacatctccaacaagcat 1119
>gb|AC140676.3| Mus musculus BAC clone RP23-124A12 from 6, complete sequence Length = 197819 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 tatagaaatatgaaattgtca 470 ||||||||||||||||||||| Sbjct: 7402 tatagaaatatgaaattgtca 7382
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||| ||||||||||| ||||| Sbjct: 27204 aaacatctcccatggaacatctccaactagcat 27172
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| ||||||||||||||| || |||||||| Sbjct: 1144 aaacatctcccatgggacatcaccgacaagcat 1112
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 aaacaactcccatgggacatctccaacaagcat 427 ||||| |||||| || ||||||||||||||||| Sbjct: 731 aaacatctcccacggaacatctccaacaagcat 699
>gb|AC107710.5| Mus musculus chromosome 19, clone RP23-269K10, complete sequence Length = 188708 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aatatcaatacacgtctcct 121 |||||||||||||||||||| Sbjct: 10127 aatatcaatacacgtctcct 10108
>ref|NM_100334.2| Arabidopsis thaliana IAA12 (BODENLOS); transcription factor AT1G04550 (IAA12) transcript variant AT1G04550.2 mRNA, complete cds Length = 1198 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ccatgggacatctccaacaagcat 427 |||||| ||||||||||||||||| Sbjct: 774 ccatggaacatctccaacaagcat 751
>ref|NM_179258.1| Arabidopsis thaliana IAA12 (BODENLOS); transcription factor AT1G04550 (IAA12) transcript variant AT1G04550.1 mRNA, complete cds Length = 1352 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ccatgggacatctccaacaagcat 427 |||||| ||||||||||||||||| Sbjct: 855 ccatggaacatctccaacaagcat 832
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 |||||||||||||||| ||||| ||||| Sbjct: 688 actcccatgggacatcgccaacgagcat 661
>ref|XM_464766.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1408 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 cccatgggacatctccaacaagca 426 ||||||| |||||||||||||||| Sbjct: 1058 cccatggcacatctccaacaagca 1035
>gb|AC116370.17| Mus musculus chromosome 3, clone RP24-113D8, complete sequence Length = 155613 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tcttcatatagaaatatgaa 463 |||||||||||||||||||| Sbjct: 7790 tcttcatatagaaatatgaa 7809
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 gggacatctccaacaagcat 427 |||||||||||||||||||| Sbjct: 760 gggacatctccaacaagcat 741
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agagttcttcttttttcatt 232 |||||||||||||||||||| Sbjct: 276051 agagttcttcttttttcatt 276032
>gb|AC134605.5| Mus musculus BAC clone RP23-42E17 from chromosome 14, complete sequence Length = 216097 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aggcataccataatatcaat 110 |||||||||||||||||||| Sbjct: 116738 aggcataccataatatcaat 116757
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 |||||||||| ||||| ||||||||||| Sbjct: 130363 actcccatggaacatcgccaacaagcat 130336
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agagttcttcttttttcatt 232 |||||||||||||||||||| Sbjct: 306804 agagttcttcttttttcatt 306785
>gb|AE006496.1| Streptococcus pyogenes M1 GAS, section 25 of 167 of the complete genome Length = 13360 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agagttcttcttttttcatt 232 |||||||||||||||||||| Sbjct: 12078 agagttcttcttttttcatt 12059
>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence Length = 214060 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 cttccggcggggaggggggc 279 |||||||||||||||||||| Sbjct: 89303 cttccggcggggaggggggc 89322
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agagttcttcttttttcatt 232 |||||||||||||||||||| Sbjct: 282301 agagttcttcttttttcatt 282282
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agagttcttcttttttcatt 232 |||||||||||||||||||| Sbjct: 278953 agagttcttcttttttcatt 278934
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agagttcttcttttttcatt 232 |||||||||||||||||||| Sbjct: 281378 agagttcttcttttttcatt 281359
>gb|AC124459.5| Mus musculus BAC clone RP24-140E5 from chromosome 19, complete sequence Length = 170323 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aatatcaatacacgtctcct 121 |||||||||||||||||||| Sbjct: 94100 aatatcaatacacgtctcct 94119
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 |||||||||| ||||| ||||||||||| Sbjct: 37552 actcccatggaacatcgccaacaagcat 37525
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gggacatctccaacaagcat 427 |||||||||||||||||||| Sbjct: 30188868 gggacatctccaacaagcat 30188887
>gb|AC138108.3| Mus musculus BAC clone RP24-497M9 from chromosome 10, complete sequence Length = 135541 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cttccggcggggaggggggc 279 |||||||||||||||||||| Sbjct: 30421 cttccggcggggaggggggc 30402
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 gggacatctccaacaagcat 427 |||||||||||||||||||| Sbjct: 35027 gggacatctccaacaagcat 35008
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 gggacatctccaacaagcat 427 |||||||||||||||||||| Sbjct: 3952 gggacatctccaacaagcat 3933
>gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete sequence Length = 238657 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgggagagttcttctttttt 228 |||||||||||||||||||| Sbjct: 54801 tgggagagttcttctttttt 54820
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agagttcttcttttttcatt 232 |||||||||||||||||||| Sbjct: 278264 agagttcttcttttttcatt 278245
>emb|AL445235.30| Human DNA sequence from clone RP1-65J11 on chromosome 1 Contains the 5' end of the PUM1 gene for pumilio homolog 1 (Drosophila), the SDC3 gene for syndecan 3 (N-syndecan), two novel genes and a CpG island, complete sequence Length = 167478 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 atagcttcacacttgcatctaatt 318 |||||||||||||||| ||||||| Sbjct: 117233 atagcttcacacttgcttctaatt 117256
>gb|AC092853.18| Mus musculus strain 129/SvJ clone mgs1-271d8 map X, complete sequence Length = 203118 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cttcttttttcattatctag 238 |||||||||||||||||||| Sbjct: 85861 cttcttttttcattatctag 85880
>gb|AF332398.1| Arabidopsis thaliana auxin-induced protein, IAA12 (At1g04550) mRNA, complete cds Length = 720 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ccatgggacatctccaacaagcat 427 |||||| ||||||||||||||||| Sbjct: 606 ccatggaacatctccaacaagcat 583
>gb|AY096535.1| Arabidopsis thaliana auxin-induced protein IAA12 (At1g04550) mRNA, complete cds Length = 751 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ccatgggacatctccaacaagcat 427 |||||| ||||||||||||||||| Sbjct: 606 ccatggaacatctccaacaagcat 583
>gb|AY065240.1| Arabidopsis thaliana auxin-induced protein IAA12 (At1g04550) mRNA, complete cds Length = 1187 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ccatgggacatctccaacaagcat 427 |||||| ||||||||||||||||| Sbjct: 748 ccatggaacatctccaacaagcat 725
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||| || ||||||||||||||||| Sbjct: 111841 actcccacggaacatctccaacaagcat 111868
>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence Length = 217409 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 atgtgcatatataatgtgta 158 |||||||||||||||||||| Sbjct: 201216 atgtgcatatataatgtgta 201197
>gb|AC113168.2| Homo sapiens chromosome 3 clone RP11-268B23, complete sequence Length = 158868 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 atgtgcatatataatgtgta 158 |||||||||||||||||||| Sbjct: 98662 atgtgcatatataatgtgta 98681
>gb|AC112220.2| Homo sapiens chromosome 3 clone RP11-10C24, complete sequence Length = 152227 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 atgtgcatatataatgtgta 158 |||||||||||||||||||| Sbjct: 123910 atgtgcatatataatgtgta 123929
>gb|AC112173.3| Homo sapiens chromosome 5 clone CTD-2275D10, complete sequence Length = 125551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ttcttttttcattatctaga 239 |||||||||||||||||||| Sbjct: 48574 ttcttttttcattatctaga 48555
>gb|AC006340.5| Arabidopsis thaliana chromosome 2 clone T9I22 map CIC06C07, complete sequence Length = 95375 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 |||||||||| ||||| ||||||||||| Sbjct: 48691 actcccatggaacatcgccaacaagcat 48664
>gb|AE009976.1| Streptococcus pyogenes strain MGAS8232, section 24 of 173 of the complete genome Length = 11529 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agagttcttcttttttcatt 232 |||||||||||||||||||| Sbjct: 10247 agagttcttcttttttcatt 10228
>gb|AC018902.8| Homo sapiens chromosome 15 clone RP11-327C2 map 15Q21.2, complete sequence Length = 157226 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 atatagaaatatgaaattgtcact 472 |||||||||||||||||| ||||| Sbjct: 32396 atatagaaatatgaaattatcact 32419
>gb|AC010674.11| Homo sapiens chromosome 15 clone RP11-430B1 map 15q21.1, complete sequence Length = 214415 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 atatagaaatatgaaattgtcact 472 |||||||||||||||||| ||||| Sbjct: 209616 atatagaaatatgaaattatcact 209639
>dbj|AK053728.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130303A22 product:GATA binding protein 3, full insert sequence Length = 2514 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgggagagttcttctttttt 228 |||||||||||||||||||| Sbjct: 1410 tgggagagttcttctttttt 1429
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||| || ||||||||||||||||| Sbjct: 4387948 actcccagggcacatctccaacaagcat 4387975
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 agtgggagagttcttcttttttca 230 ||||||||||||| |||||||||| Sbjct: 27218728 agtgggagagttcctcttttttca 27218705
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 |||||||||| ||||| ||||||||||| Sbjct: 7852777 actcccatggaacatcgccaacaagcat 7852750
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gggacatctccaacaagcat 427 |||||||||||||||||||| Sbjct: 30280290 gggacatctccaacaagcat 30280309
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 cccatgggacatctccaacaagca 426 ||||||| |||||||||||||||| Sbjct: 7244823 cccatggcacatctccaacaagca 7244846
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||||||| | |||||||||||||| Sbjct: 40692257 actcccatgggtcgtctccaacaagcat 40692230
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||||||| | |||||||||||||| Sbjct: 134235 actcccatgggtcgtctccaacaagcat 134208
>gb|AY088042.1| Arabidopsis thaliana clone 40608 mRNA, complete sequence Length = 1194 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ccatgggacatctccaacaagcat 427 |||||| ||||||||||||||||| Sbjct: 774 ccatggaacatctccaacaagcat 751
>gb|AC133939.4| Mus musculus BAC clone RP23-402F1 from chromosome 5, complete sequence Length = 193121 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 gaatctgaattctgataatc 514 |||||||||||||||||||| Sbjct: 83978 gaatctgaattctgataatc 83997
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 agtgggagagttcttcttttttca 230 ||||||||||||| |||||||||| Sbjct: 75744 agtgggagagttcctcttttttca 75721
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||| || ||||||||||||||||| Sbjct: 27797 actcccagggcacatctccaacaagcat 27824
>gb|AC112944.7| Mus musculus chromosome 5, clone RP23-411F8, complete sequence Length = 209174 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 gaatctgaattctgataatc 514 |||||||||||||||||||| Sbjct: 187561 gaatctgaattctgataatc 187542
>emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on chromosome 2, complete sequence Length = 171715 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgggagagttcttctttttt 228 |||||||||||||||||||| Sbjct: 276 tgggagagttcttctttttt 257
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 cccatgggacatctccaacaagca 426 ||||||| |||||||||||||||| Sbjct: 144760 cccatggcacatctccaacaagca 144783
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 cccatgggacatctccaacaagca 426 ||||||| |||||||||||||||| Sbjct: 20631 cccatggcacatctccaacaagca 20654
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||| || ||||||||||||||||| Sbjct: 7964 actcccacggaacatctccaacaagcat 7937
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 |||||||||||||||| ||||| ||||| Sbjct: 36826 actcccatgggacatcgccaacgagcat 36799
>dbj|AK121870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103P10, full insert sequence Length = 1408 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 cccatgggacatctccaacaagca 426 ||||||| |||||||||||||||| Sbjct: 1058 cccatggcacatctccaacaagca 1035
>emb|X68218.1|PSIAA6D P.sativum gene for PS-IAA6 Length = 5923 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||| |||||||||||||| ||||| Sbjct: 4422 actcccaagggacatctccaaccagcat 4395
>gb|AC115959.17| Mus musculus chromosome 1, clone RP24-65D16, complete sequence Length = 187431 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 accacaacaaactgttcaca 78 |||||||||||||||||||| Sbjct: 89969 accacaacaaactgttcaca 89950
>gb|U18414.1|ATU18414 Arabidopsis thaliana IAA12 (IAA12) gene, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ccatgggacatctccaacaagcat 427 |||||| ||||||||||||||||| Sbjct: 705 ccatggaacatctccaacaagcat 682
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 ccatgggacatctccaacaagcat 427 |||||| ||||||||||||||||| Sbjct: 91542 ccatggaacatctccaacaagcat 91565
>emb|AL845529.10| Mouse DNA sequence from clone RP23-276D17 on chromosome 2, complete sequence Length = 166971 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgggagagttcttctttttt 228 |||||||||||||||||||| Sbjct: 165247 tgggagagttcttctttttt 165228
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||||||||||||||| || ||||| Sbjct: 23078 actcccatgggacatctcccacgagcat 23051
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 actcccatgggacatctccaacaagcat 427 ||||||| |||||||||||||| ||||| Sbjct: 57583 actcccaagggacatctccaaccagcat 57556
>gb|AC172751.1| Mus musculus BAC clone RP23-341F9 from chromosome 14, complete sequence Length = 200222 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 aggcataccataatatcaat 110 |||||||||||||||||||| Sbjct: 178969 aggcataccataatatcaat 178950
>gb|AC171325.5| Mus musculus chromosome 3, clone RP23-124B15, complete sequence Length = 191795 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 tcttcatatagaaatatgaa 463 |||||||||||||||||||| Sbjct: 69216 tcttcatatagaaatatgaa 69197
>gb|M63159.1|MUSBFCGR1 Mouse IgG receptor (beta-Fc-gamma-RII) gene, exons 1-5, clones lambda-Fc(3.2,93) Length = 11193 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 accacaacaaactgttcaca 78 |||||||||||||||||||| Sbjct: 11030 accacaacaaactgttcaca 11011
>dbj|AB051384.1| Cucumis sativus mRNA, putative member of Aux/IAA gene family, partial cds Length = 375 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 396 aacaactcccatgggacatctccaacaagcat 427 |||| |||||| |||||||| ||||||||||| Sbjct: 63 aacatctcccaagggacatcaccaacaagcat 32
>emb|AL713983.9| Mouse DNA sequence from clone RP23-244C21 on chromosome X, complete sequence Length = 148335 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cttcttttttcattatctag 238 |||||||||||||||||||| Sbjct: 116977 cttcttttttcattatctag 116996 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,382,763 Number of Sequences: 3902068 Number of extensions: 5382763 Number of successful extensions: 101136 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100446 Number of HSP's gapped (non-prelim): 690 length of query: 514 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 491 effective length of database: 17,143,297,704 effective search space: 8417359172664 effective search space used: 8417359172664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
