ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart44b07 |
|---|---|
| Clone Library Name | barley_pub |
>DNAK_CYACA (Q9TLT1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 618 Score = 35.8 bits (81), Expect = 0.043 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 29/102 (28%) Frame = -1 Query: 418 GSDSFEAEIMSWLATPLKKT-----------------------IKFADIRPAETNRPFVT 308 G D F+ +I+ WL KK+ I+ + + E N PF+T Sbjct: 223 GGDDFDKKIVDWLVDEFKKSYNIDLSKDKQALQRLTEAAEKAKIELSSVSQTEINLPFIT 282 Query: 307 FRAEGNFYFVDADHFSNKALLERLTP------KLPNESAFKN 200 +EG +F D N+A E L K+P E+A K+ Sbjct: 283 ATSEGPIHF---DKSLNRAKFEELVSELIARCKIPVENALKD 321
>UL95_EBV (P03220) Protein BGLF3| Length = 332 Score = 31.6 bits (70), Expect = 0.81 Identities = 22/62 (35%), Positives = 29/62 (46%) Frame = -1 Query: 376 TPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLERLTPKLPNESAFKNL 197 TPLK + ++I P + NRP+ R+ G D D S L L P+LP E F Sbjct: 42 TPLKSFLLVSNILPQD-NRPWHEARSSGRVAEDDYDFSSLALELLPLNPRLPEEWQFGGQ 100 Query: 196 *W 191 W Sbjct: 101 GW 102
>URE1_UREPA (Q60058) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 598 Score = 30.4 bits (67), Expect = 1.8 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = -1 Query: 379 ATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLERLTPKLPNESAF 206 A + +T+K+A I PA TN P + + A+H + L PK+P + AF Sbjct: 287 APDILETVKYAHILPASTN-PTIPYTVN-----TIAEHLDMLMVCHHLNPKVPEDVAF 338
>PANC_SCHPO (Q09673) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 283 Score = 29.3 bits (64), Expect = 4.0 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +2 Query: 269 IGVDKVEVP----FGPEGDERPVSLCGPDVSKLDRLLEGCSQPRHY 394 +GVD V P PEG + + DV KL +LEG S+P H+ Sbjct: 85 LGVDLVYAPTVEELYPEGSQ---DITFVDVPKLSTMLEGASRPGHF 127
>PDIA1_MOUSE (P09103) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (p55) (Erp59) Length = 509 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 406 FEAEIMSWLATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLE 242 F EI + + L K++ D + + R F+ + F F+D+DH N+ +LE Sbjct: 251 FGGEIKTHILLFLPKSVSDYDGKLSSFKRAAEGFKGKILFIFIDSDHTDNQRILE 305
>URE1_UREUR (P17272) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 598 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -1 Query: 379 ATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLERLTPKLPNESAF 206 A + +++K+A I PA TN P + + A+H + L PK+P + AF Sbjct: 287 APDILESVKYAHILPASTN-PTIPYTVN-----TIAEHLDMLMVCHHLNPKVPEDVAF 338
>METE_PHOLL (Q7MZ74) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 758 Score = 28.5 bits (62), Expect = 6.9 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Frame = -1 Query: 409 SFEAEIMSWLATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFV------DADHFSNKAL 248 + +AE+ SW A L+K + A + A N+P + +AE + Y ++ +N+A+ Sbjct: 337 ALDAEVKSWFAFALQKCEELA-LLTAALNQPDGSKQAELDAYSAPIRARRESKRVNNQAV 395 Query: 247 LERLTPKLPNES 212 ERL P +S Sbjct: 396 TERLAAINPQDS 407
>PANC_BUCAP (Q8K9U7) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 285 Score = 28.1 bits (61), Expect = 9.0 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%) Frame = +2 Query: 266 VIGVDKVEVPFGPEGDER-PVSLCGP---DVSKLDRLLEGCSQPRHYL 397 ++ +KVE+ F P+ +E P+ L DV KL +++EG +P H++ Sbjct: 81 ILKQEKVEILFCPDVNEMYPLGLKNHTYIDVPKLSKIIEGKVRPGHFI 128
>PYR5_HUMAN (P11172) Uridine 5'-monophosphate synthase (UMP synthase)| [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRtase); Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMPdecase)] Length = 480 Score = 28.1 bits (61), Expect = 9.0 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +3 Query: 9 PRLLRSIAIKIFQTSDSQIFAWNKITAIPYT 101 PRLL +A +FQT+ + +++ + +PYT Sbjct: 47 PRLLSQVADILFQTAQNAGISFDTVCGVPYT 77
>PDIA1_RAT (P04785) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) Length = 509 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = -1 Query: 406 FEAEIMSWLATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLE 242 F EI + + L K++ D + + + F+ + F F+D+DH N+ +LE Sbjct: 251 FGGEIKTHILLFLPKSVSDYDGKLSNFKKAAEGFKGKILFIFIDSDHTDNQRILE 305
>PYR5_MOUSE (P13439) Uridine 5'-monophosphate synthase (UMP synthase)| [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRtase); Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMPdecase)] Length = 481 Score = 28.1 bits (61), Expect = 9.0 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +3 Query: 9 PRLLRSIAIKIFQTSDSQIFAWNKITAIPYT 101 PRLL +A +FQT+ + +++ + +PYT Sbjct: 47 PRLLSQVADILFQTAKNAGISFDSVCGVPYT 77
>PDIA1_PONPY (Q5R5B6) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) Length = 508 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = -1 Query: 406 FEAEIMSWLATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLE 242 F EI + + L K++ D + + +F+ + F F+D+DH N+ +LE Sbjct: 249 FGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILE 303
>PDIA1_HUMAN (P07237) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (p55) Length = 508 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = -1 Query: 406 FEAEIMSWLATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLE 242 F EI + + L K++ D + + +F+ + F F+D+DH N+ +LE Sbjct: 249 FGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILE 303
>GSBP_CHICK (P12244) Dolichyl-diphosphooligosaccharide--protein| glycotransferase precursor (EC 2.4.1.119) (Glycosylation site-binding chain) (GSBP) Length = 508 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = -1 Query: 406 FEAEIMSWLATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLE 242 F EI + + L K++ D + + + F+ + F F+D+DH N+ +LE Sbjct: 249 FGGEIKTHILLFLPKSVSDYDGKLSNLKKAADGFKGKILFVFIDSDHTDNQRILE 303 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,464,842 Number of Sequences: 219361 Number of extensions: 973859 Number of successful extensions: 3183 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2697 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3171 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
