ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart44b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470444.1| Oryza sativa (japonica cultivar-group), mRNA 174 2e-40
2gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome... 174 2e-40
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 174 2e-40
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5dbj|AK120043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
6dbj|AK102872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
7dbj|AK059849.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
8dbj|AK058371.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
9gb|AC008529.4|AC008529 Homo sapiens chromosome 5 clone CTC-475P1... 44 0.37
10emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chro... 42 1.5
11gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, compl... 42 1.5
12gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 42 1.5
13gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8... 40 5.7
14gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosom... 40 5.7
15emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chrom... 40 5.7
16emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3 40 5.7
17emb|BX470263.9| Zebrafish DNA sequence from clone DKEY-15P9 in l... 40 5.7
18gb|BC033908.1| Homo sapiens cDNA clone IMAGE:4828604 40 5.7
19gb|AC055845.15| Homo sapiens chromosome 11, clone RP11-682B13, c... 40 5.7
20gb|AC068299.21| Homo sapiens 3 BAC RP11-560F18 (Roswell Park Can... 40 5.7
21gb|AC109473.2| Homo sapiens chromosome 5 clone RP11-3B10, comple... 40 5.7
22gb|AC025175.4| Homo sapiens chromosome 5 clone CTD-2081C10, comp... 40 5.7
23gb|AC024571.5| Homo sapiens chromosome 5 clone CTD-2220M16, comp... 40 5.7
24gb|AC008575.7| Homo sapiens chromosome 5 clone CTC-554D6, comple... 40 5.7
25gb|AC079463.3|AC079463 Homo sapiens chromosome 5 clone CTB-123N6... 40 5.7
26dbj|AP000049.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 5.7
27dbj|AP001718.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.7
28dbj|AP002518.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.7
29gb|M19173.1|PFARGEB P.falciparum 18S ribosomal RNA not in asexua... 40 5.7
30emb|AL929365.1|PF13PB1 Plasmodium falciparum chromosome 13, unma... 40 5.7
31gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, comple... 40 5.7
32dbj|AP000193.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.7
33dbj|AP000311.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.7
34dbj|AP000117.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 5.7

>ref|XM_470444.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 935

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/240 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 cttccatcacaagttcttgaacgcagactcgttagggagcttaggggtgagcctctccag 247
           |||| |||||||||||||||| |||||||| |||||| |||| || || |||||| ||| 
Sbjct: 805 cttcaatcacaagttcttgaatgcagactcattagggtgcttgggagtaagcctcgccaa 746

                                                                       
Query: 248 caaggccttgttggagaagtgatcggcgtcgacaaagtagaagttcccttcggccctgaa 307
           ||| |||||||| | |||||| ||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 745 caaagccttgttcgggaagtgctcggcatcaacaaaatagaagttcccttcagccctaaa 686

                                                                       
Query: 308 ggtgacgaaaggccggttagtctctgcgggcctgatgtcagcaaacttgatcgtcttctt 367
            ||||| ||||| | ||| |||||||  |||||||  |||||||||||||| ||| |  |
Sbjct: 685 agtgacaaaaggtctgttggtctctggaggcctgacatcagcaaacttgattgtccttgt 626

                                                                       
Query: 368 gaggggtgtagccagccacgacattatctctgcctcgaagctgtctgaaccctgtcgcca 427
           |||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |||||||
Sbjct: 625 gaggggtgtagccagccatgacataatctctgcttcaaagctatctgaacctggtcgcca 566



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>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
             map S15179S, complete sequence
          Length = 166005

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/240 (84%)
 Strand = Plus / Minus

                                                                         
Query: 188   cttccatcacaagttcttgaacgcagactcgttagggagcttaggggtgagcctctccag 247
             |||| |||||||||||||||| |||||||| |||||| |||| || || |||||| ||| 
Sbjct: 64032 cttcaatcacaagttcttgaatgcagactcattagggtgcttgggagtaagcctcgccaa 63973

                                                                         
Query: 248   caaggccttgttggagaagtgatcggcgtcgacaaagtagaagttcccttcggccctgaa 307
             ||| |||||||| | |||||| ||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 63972 caaagccttgttcgggaagtgctcggcatcaacaaaatagaagttcccttcagccctaaa 63913

                                                                         
Query: 308   ggtgacgaaaggccggttagtctctgcgggcctgatgtcagcaaacttgatcgtcttctt 367
              ||||| ||||| | ||| |||||||  |||||||  |||||||||||||| ||| |  |
Sbjct: 63912 agtgacaaaaggtctgttggtctctggaggcctgacatcagcaaacttgattgtccttgt 63853

                                                                         
Query: 368   gaggggtgtagccagccacgacattatctctgcctcgaagctgtctgaaccctgtcgcca 427
             |||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |||||||
Sbjct: 63852 gaggggtgtagccagccatgacataatctctgcttcaaagctatctgaacctggtcgcca 63793



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/240 (84%)
 Strand = Plus / Minus

                                                                            
Query: 188      cttccatcacaagttcttgaacgcagactcgttagggagcttaggggtgagcctctccag 247
                |||| |||||||||||||||| |||||||| |||||| |||| || || |||||| ||| 
Sbjct: 35666254 cttcaatcacaagttcttgaatgcagactcattagggtgcttgggagtaagcctcgccaa 35666195

                                                                            
Query: 248      caaggccttgttggagaagtgatcggcgtcgacaaagtagaagttcccttcggccctgaa 307
                ||| |||||||| | |||||| ||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 35666194 caaagccttgttcgggaagtgctcggcatcaacaaaatagaagttcccttcagccctaaa 35666135

                                                                            
Query: 308      ggtgacgaaaggccggttagtctctgcgggcctgatgtcagcaaacttgatcgtcttctt 367
                 ||||| ||||| | ||| |||||||  |||||||  |||||||||||||| ||| |  |
Sbjct: 35666134 agtgacaaaaggtctgttggtctctggaggcctgacatcagcaaacttgattgtccttgt 35666075

                                                                            
Query: 368      gaggggtgtagccagccacgacattatctctgcctcgaagctgtctgaaccctgtcgcca 427
                |||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |||||||
Sbjct: 35666074 gaggggtgtagccagccatgacataatctctgcttcaaagctatctgaacctggtcgcca 35666015



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/240 (84%)
 Strand = Plus / Minus

                                                                            
Query: 188      cttccatcacaagttcttgaacgcagactcgttagggagcttaggggtgagcctctccag 247
                |||| |||||||||||||||| |||||||| |||||| |||| || || |||||| ||| 
Sbjct: 35756327 cttcaatcacaagttcttgaatgcagactcattagggtgcttgggagtaagcctcgccaa 35756268

                                                                            
Query: 248      caaggccttgttggagaagtgatcggcgtcgacaaagtagaagttcccttcggccctgaa 307
                ||| |||||||| | |||||| ||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 35756267 caaagccttgttcgggaagtgctcggcatcaacaaaatagaagttcccttcagccctaaa 35756208

                                                                            
Query: 308      ggtgacgaaaggccggttagtctctgcgggcctgatgtcagcaaacttgatcgtcttctt 367
                 ||||| ||||| | ||| |||||||  |||||||  |||||||||||||| ||| |  |
Sbjct: 35756207 agtgacaaaaggtctgttggtctctggaggcctgacatcagcaaacttgattgtccttgt 35756148

                                                                            
Query: 368      gaggggtgtagccagccacgacattatctctgcctcgaagctgtctgaaccctgtcgcca 427
                |||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |||||||
Sbjct: 35756147 gaggggtgtagccagccatgacataatctctgcttcaaagctatctgaacctggtcgcca 35756088



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>dbj|AK120043.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-F05, full
           insert sequence
          Length = 1079

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/240 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 cttccatcacaagttcttgaacgcagactcgttagggagcttaggggtgagcctctccag 247
           |||| |||||||||||||||| |||||||| |||||| |||| || || |||||| ||| 
Sbjct: 708 cttcaatcacaagttcttgaatgcagactcattagggtgcttgggagtaagcctcgccaa 649

                                                                       
Query: 248 caaggccttgttggagaagtgatcggcgtcgacaaagtagaagttcccttcggccctgaa 307
           ||| |||||||| | |||||| ||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 648 caaagccttgttcgggaagtgctcggcatcaacaaaatagaagttcccttcagccctaaa 589

                                                                       
Query: 308 ggtgacgaaaggccggttagtctctgcgggcctgatgtcagcaaacttgatcgtcttctt 367
            ||||| ||||| | ||| |||||||  |||||||  |||||||||||||| ||| |  |
Sbjct: 588 agtgacaaaaggtctgttggtctctggaggcctgacatcagcaaacttgattgtccttgt 529

                                                                       
Query: 368 gaggggtgtagccagccacgacattatctctgcctcgaagctgtctgaaccctgtcgcca 427
           |||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |||||||
Sbjct: 528 gaggggtgtagccagccatgacataatctctgcttcaaagctatctgaacctggtcgcca 469



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>dbj|AK102872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B07, full
           insert sequence
          Length = 1151

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/240 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 cttccatcacaagttcttgaacgcagactcgttagggagcttaggggtgagcctctccag 247
           |||| |||||||||||||||| |||||||| |||||| |||| || || |||||| ||| 
Sbjct: 823 cttcaatcacaagttcttgaatgcagactcattagggtgcttgggagtaagcctcgccaa 764

                                                                       
Query: 248 caaggccttgttggagaagtgatcggcgtcgacaaagtagaagttcccttcggccctgaa 307
           ||| |||||||| | |||||| ||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 763 caaagccttgttcgggaagtgctcggcatcaacaaaatagaagttcccttcagccctaaa 704

                                                                       
Query: 308 ggtgacgaaaggccggttagtctctgcgggcctgatgtcagcaaacttgatcgtcttctt 367
            ||||| ||||| | ||| |||||||  |||||||  |||||||||||||| ||| |  |
Sbjct: 703 agtgacaaaaggtctgttggtctctggaggcctgacatcagcaaacttgattgtccttgt 644

                                                                       
Query: 368 gaggggtgtagccagccacgacattatctctgcctcgaagctgtctgaaccctgtcgcca 427
           |||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |||||||
Sbjct: 643 gaggggtgtagccagccatgacataatctctgcttcaaagctatctgaacctggtcgcca 584



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>dbj|AK059849.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-F12, full
           insert sequence
          Length = 1123

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/240 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 cttccatcacaagttcttgaacgcagactcgttagggagcttaggggtgagcctctccag 247
           |||| |||||||||||||||| |||||||| |||||| |||| || || |||||| ||| 
Sbjct: 822 cttcaatcacaagttcttgaatgcagactcattagggtgcttgggagtaagcctcgccaa 763

                                                                       
Query: 248 caaggccttgttggagaagtgatcggcgtcgacaaagtagaagttcccttcggccctgaa 307
           ||| |||||||| | |||||| ||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 762 caaagccttgttcgggaagtgctcggcatcaacaaaatagaagttcccttcagccctaaa 703

                                                                       
Query: 308 ggtgacgaaaggccggttagtctctgcgggcctgatgtcagcaaacttgatcgtcttctt 367
            ||||| ||||| | ||| |||||||  |||||||  |||||||||||||| ||| |  |
Sbjct: 702 agtgacaaaaggtctgttggtctctggaggcctgacatcagcaaacttgattgtccttgt 643

                                                                       
Query: 368 gaggggtgtagccagccacgacattatctctgcctcgaagctgtctgaaccctgtcgcca 427
           |||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |||||||
Sbjct: 642 gaggggtgtagccagccatgacataatctctgcttcaaagctatctgaacctggtcgcca 583



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>dbj|AK058371.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G06, full
           insert sequence
          Length = 361

 Score =  153 bits (77), Expect = 6e-34
 Identities = 179/213 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 cttccatcacaagttcttgaacgcagactcgttagggagcttaggggtgagcctctccag 247
           |||| |||||||||||||||| |||||||| |||||| ||||  | || |||||| ||| 
Sbjct: 214 cttcaatcacaagttcttgaatgcagactcattagggtgcttgagagtaagcctcgccaa 155

                                                                       
Query: 248 caaggccttgttggagaagtgatcggcgtcgacaaagtagaagttcccttcggccctgaa 307
           ||| |||||||| | |||||| ||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 154 caaagccttgttcgggaagtgctcggcatcaacaaaatagaagttcccttcagccctaaa 95

                                                                       
Query: 308 ggtgacgaaaggccggttagtctctgcgggcctgatgtcagcaaacttgatcgtcttctt 367
            ||||| ||||| | ||| |||||||  |||||||  |||||||||||||| ||| |  |
Sbjct: 94  agtgacaaaaggtctgttggtctctggaggcctgacatcagcaaacttgattgtccttgt 35

                                            
Query: 368 gaggggtgtagccagccacgacattatctctgc 400
           |||||||||||||||||| ||||| ||||||||
Sbjct: 34  gaggggtgtagccagccatgacataatctctgc 2



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>gb|AC008529.4|AC008529 Homo sapiens chromosome 5 clone CTC-475P15, complete sequence
          Length = 169557

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 337   gcctgatgtcagcaaacttgat 358
             ||||||||||||||||||||||
Sbjct: 71054 gcctgatgtcagcaaacttgat 71033



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>emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chromosome 1 Contains the
             3' end of a novel gene and a novel gene, complete sequence
          Length = 186710

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 337   gcctgatgtcagcaaacttga 357
             |||||||||||||||||||||
Sbjct: 33262 gcctgatgtcagcaaacttga 33242



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>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence
          Length = 120910

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 337   gcctgatgtcagcaaacttga 357
             |||||||||||||||||||||
Sbjct: 84120 gcctgatgtcagcaaacttga 84100



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>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    caagattgttaagatccattg 30
             |||||||||||||||||||||
Sbjct: 12772 caagattgttaagatccattg 12792



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>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete
              sequence
          Length = 271546

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    tattctcacaagtattagctacag 128
              |||| |||||||||||||||||||
Sbjct: 159381 tattttcacaagtattagctacag 159358



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>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence
          Length = 179668

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    gggtgagcctctccagcaag 251
              ||||||||||||||||||||
Sbjct: 127398 gggtgagcctctccagcaag 127379



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>emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chromosome 6, complete
             sequence
          Length = 186091

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    aataaaaatattccaaacca 51
             ||||||||||||||||||||
Sbjct: 87828 aataaaaatattccaaacca 87847



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>emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3
          Length = 67970

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 105   tattctcacaagtattagctacag 128
             |||| |||||||||||||||||||
Sbjct: 24076 tattttcacaagtattagctacag 24053



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>emb|BX470263.9| Zebrafish DNA sequence from clone DKEY-15P9 in linkage group 9,
             complete sequence
          Length = 176022

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tgcaataaaaatattccaaa 48
             ||||||||||||||||||||
Sbjct: 52448 tgcaataaaaatattccaaa 52467



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>gb|BC033908.1| Homo sapiens cDNA clone IMAGE:4828604
          Length = 3868

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 404  gaagctgtctgaaccctgtc 423
            ||||||||||||||||||||
Sbjct: 1151 gaagctgtctgaaccctgtc 1170



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>gb|AC055845.15| Homo sapiens chromosome 11, clone RP11-682B13, complete sequence
          Length = 155304

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    acatattctcacaagtatta 121
              ||||||||||||||||||||
Sbjct: 125086 acatattctcacaagtatta 125067



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>gb|AC068299.21| Homo sapiens 3 BAC RP11-560F18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70466

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   gaagctgtctgaaccctgtc 423
             ||||||||||||||||||||
Sbjct: 65565 gaagctgtctgaaccctgtc 65584



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>gb|AC109473.2| Homo sapiens chromosome 5 clone RP11-3B10, complete sequence
          Length = 170363

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   gaagctgtctgaaccctgtc 423
             ||||||||||||||||||||
Sbjct: 75998 gaagctgtctgaaccctgtc 75979



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>gb|AC025175.4| Homo sapiens chromosome 5 clone CTD-2081C10, complete sequence
          Length = 166907

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   cagccaggttcaagagcaca 168
             ||||||||||||||||||||
Sbjct: 11121 cagccaggttcaagagcaca 11102



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>gb|AC024571.5| Homo sapiens chromosome 5 clone CTD-2220M16, complete sequence
          Length = 109134

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   cagccaggttcaagagcaca 168
             ||||||||||||||||||||
Sbjct: 89458 cagccaggttcaagagcaca 89439



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>gb|AC008575.7| Homo sapiens chromosome 5 clone CTC-554D6, complete sequence
          Length = 168285

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   gaagctgtctgaaccctgtc 423
             ||||||||||||||||||||
Sbjct: 12215 gaagctgtctgaaccctgtc 12234



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>gb|AC079463.3|AC079463 Homo sapiens chromosome 5 clone CTB-123N6, complete sequence
          Length = 106514

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   gaagctgtctgaaccctgtc 423
             ||||||||||||||||||||
Sbjct: 91600 gaagctgtctgaaccctgtc 91581



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>dbj|AP000049.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 20/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gataccgtatactacatatt 108
             ||||||||||||||||||||
Sbjct: 80387 gataccgtatactacatatt 80406



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>dbj|AP001718.1| Homo sapiens genomic DNA, chromosome 21q, section 62/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gataccgtatactacatatt 108
             ||||||||||||||||||||
Sbjct: 59148 gataccgtatactacatatt 59167



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>dbj|AP002518.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-64D24, complete
              sequence
          Length = 164795

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    gaagctgtctgaaccctgtc 423
              ||||||||||||||||||||
Sbjct: 157086 gaagctgtctgaaccctgtc 157067



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>gb|M19173.1|PFARGEB P.falciparum 18S ribosomal RNA not in asexual parasites
          Length = 2040

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 105 tattctcacaagtattagctacag 128
           |||| |||||||||||||||||||
Sbjct: 181 tattttcacaagtattagctacag 158



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>emb|AL929365.1|PF13PB1 Plasmodium falciparum chromosome 13, unmapped contig
          Length = 18168

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 105  tattctcacaagtattagctacag 128
            |||| |||||||||||||||||||
Sbjct: 8892 tattttcacaagtattagctacag 8915



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>gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, complete sequence
          Length = 183967

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   gaagctgtctgaaccctgtc 423
             ||||||||||||||||||||
Sbjct: 66169 gaagctgtctgaaccctgtc 66150



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>dbj|AP000193.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 20/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gataccgtatactacatatt 108
             ||||||||||||||||||||
Sbjct: 16974 gataccgtatactacatatt 16993



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>dbj|AP000311.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:130N6, complete sequence
          Length = 125242

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gataccgtatactacatatt 108
             ||||||||||||||||||||
Sbjct: 80387 gataccgtatactacatatt 80406



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>dbj|AP000117.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 20/20
          Length = 151516

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gataccgtatactacatatt 108
             ||||||||||||||||||||
Sbjct: 16974 gataccgtatactacatatt 16993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,677,941
Number of Sequences: 3902068
Number of extensions: 3677941
Number of successful extensions: 60197
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60135
Number of HSP's gapped (non-prelim): 62
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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