Clone Name | rbart44b06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MET31_YEAST (Q03081) Transcriptional regulator MET31 (Methionine... | 28 | 9.2 | 2 | FBXL8_MOUSE (Q8CIG9) F-box/LRR-repeat protein 8 (F-box and leuci... | 28 | 9.2 |
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>MET31_YEAST (Q03081) Transcriptional regulator MET31 (Methionine-requiring| protein 31) Length = 177 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 Query: 237 NTPTHTDPIINELRYR 284 ++PTHTDPII EL +R Sbjct: 26 SSPTHTDPIIRELLHR 41
>FBXL8_MOUSE (Q8CIG9) F-box/LRR-repeat protein 8 (F-box and leucine-rich repeat| protein 8) (F-box protein FBL8) Length = 374 Score = 28.5 bits (62), Expect = 9.2 Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 13/63 (20%) Frame = +1 Query: 100 TVGPGTPLT-HY*SQLRTTHIRLLARP------------CTQLRDVHCAPTRRRSTTHEI 240 TVGP T HY LR +R A P C LR++HC R S Sbjct: 288 TVGPVRFATRHYAETLRALEVRASASPELHTALEELAARCAGLREIHCFCVVRPSVLDAF 347 Query: 241 RPH 249 R H Sbjct: 348 RAH 350 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,359,249 Number of Sequences: 219361 Number of extensions: 937317 Number of successful extensions: 2220 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2172 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2219 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)