Clone Name | rbart44b05 |
---|---|
Clone Library Name | barley_pub |
>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 45.8 bits (107), Expect = 6e-05 Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 477 ATEVMSGTKIFDPVKTPLLAAWMDRFSELDAAKAALP-EVDRVVEF 343 A + + G ++ DP +TP LAAW +RF DAAK +P + D+++EF Sbjct: 178 AIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEF 223
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 41.2 bits (95), Expect = 0.001 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = -2 Query: 477 ATEVMSGTKIFDPVKTPLLAAWMDRFSELDAAKAALPEVDRVVEF 343 A E + G + D TPLL W RF+ AAK LP+ ++VV+F Sbjct: 177 ACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQF 221
>CRF1_YARLI (P45815) Copper resistance protein CRF1| Length = 411 Score = 30.8 bits (68), Expect = 1.9 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 306 QQRQQLVPASSWQIRPPYQPLATPPSQHRAR*SDPSMPPRAES 434 QQ Q P + + P P+ATP HRA + PS+ P+ +S Sbjct: 146 QQPQMPTPVHTTNVTTP--PVATPTHSHRALSTTPSLSPQPQS 186
>OL287_RAT (P23267) Olfactory receptor 287 (Olfactory receptor-like protein| F6) Length = 311 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = +1 Query: 154 VQFYTRTSTKSKQIFWDRGNIIN*SLFERNMHFSYSMGLTFL*YLLVVRSNNSGSSLCLP 333 + F T K+ F RG +I+ + M+F +S+G T +LL V + + ++CLP Sbjct: 74 IWFTTACVPKTLATFAPRGGVISLAGCATQMYFVFSLGCTEY-FLLAVMAYDRYLAICLP 132 Query: 334 L 336 L Sbjct: 133 L 133
>Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)| Length = 875 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = +3 Query: 306 QQRQQLVPASSWQIRPPYQPLATPPSQHRAR*SDPSMPPR 425 QQ Q P Q +PP QP PP Q P PP+ Sbjct: 101 QQPPQPPPDQPQQPQPPQQPPQQPPQQQPQPPQPPQQPPQ 140
>CD177_HUMAN (Q8N6Q3) CD177 antigen precursor (Polycythemia rubra vera protein| 1) (PRV-1) (NB1 glycoprotein) (NB1 GP) (Human neutrophil alloantigen 2a) (HNA-2a) Length = 437 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 347 STTLSTSGNAAFAASSSLKRSIHAAKSGVLTGS 445 ST + T G + A +S K +IH+A GVL S Sbjct: 257 STLVGTKGCSTVGAQNSQKTTIHSAPPGVLVAS 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,615,680 Number of Sequences: 219361 Number of extensions: 1138325 Number of successful extensions: 2760 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2756 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)