>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                            
Query: 357      acctaccatggcttcaggtcgcccttggggccctgggtccagttcagcgccttctgcccc 416
                |||||||||||||||||||| |||   ||||||||||||||||||||| |||||||||||
Sbjct: 40619143 acctaccatggcttcaggtcacccaccgggccctgggtccagttcagcaccttctgcccc 40619202

                   
Query: 417      ggg 419
                |||
Sbjct: 40619203 ggg 40619205

>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0093F16
          Length = 160925

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                         
Query: 357   acctaccatggcttcaggtcgcccttggggccctgggtccagttcagcgccttctgcccc 416
             |||||||||||||||||||| |||   ||||||||||||||||||||| |||||||||||
Sbjct: 61121 acctaccatggcttcaggtcacccaccgggccctgggtccagttcagcaccttctgcccc 61180

                
Query: 417   ggg 419
             |||
Sbjct: 61181 ggg 61183

>dbj|AK068465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156C14, full
            insert sequence
          Length = 1739

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                        
Query: 357  acctaccatggcttcaggtcgcccttggggccctgggtccagttcagcgccttctgcccc 416
            |||||||||||||||||||| |||   ||||||||||||||||||||| |||||||||||
Sbjct: 1390 acctaccatggcttcaggtcacccaccgggccctgggtccagttcagcaccttctgcccc 1331

               
Query: 417  ggg 419
            |||
Sbjct: 1330 ggg 1328

>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                         
Query: 357   acctaccatggcttcaggtcgcccttggggccctgggtccagttcagcgccttctgcccc 416
             |||||||||||||||||||| |||   ||||||||||||||||||||| |||||||||||
Sbjct: 99158 acctaccatggcttcaggtcacccaccgggccctgggtccagttcagcaccttctgcccc 99217

                
Query: 417   ggg 419
             |||
Sbjct: 99218 ggg 99220

>ref|XM_463682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 359  ctaccatggcttcaggtcgcccttggggccctgggtccagttcagcgccttctgccccgg 418
            |||||||||||||||||| |||   ||||||||||||||||||||| |||||||||||||
Sbjct: 1248 ctaccatggcttcaggtcacccaccgggccctgggtccagttcagcaccttctgccccgg 1189

             
Query: 419  g 419
            |
Sbjct: 1188 g 1188

>gb|AY107251.1| Zea mays PCO120698 mRNA sequence
          Length = 1033

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 357 acctaccatggcttcaggtcgcccttggggccctgggtccagttcagcgccttctgccc 415
           |||||||||||||||||||||||   |||||||| ||||||||| ||| ||||||||||
Sbjct: 755 acctaccatggcttcaggtcgccgcgggggccctcggtccagttgagcaccttctgccc 697

>emb|AL512446.8| Human DNA sequence from clone RP11-268K9 on chromosome 6, complete
             sequence
          Length = 61258

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 210   caaaaagaagcaaggtaatcagaaaggaag 239
             ||||||||||||||||||  ||||||||||
Sbjct: 54161 caaaaagaagcaaggtaaatagaaaggaag 54190

>gb|AC064878.9|AC064878 Homo sapiens chromosome 6 clone RP11-13I13, complete sequence
          Length = 168654

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 210    caaaaagaagcaaggtaatcagaaaggaag 239
              ||||||||||||||||||  ||||||||||
Sbjct: 142031 caaaaagaagcaaggtaaatagaaaggaag 142002

>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region
          Length = 108553

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    cacatggcgccaatgccggtg 348
              |||||||||||||||||||||
Sbjct: 101646 cacatggcgccaatgccggtg 101666

>gb|AF202964.4| Homo sapiens chromosome 8 clone XX-77L18 map q21.3, complete sequence
          Length = 99103

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 217   aagcaaggtaatcagaaaggaaggagctt 245
             |||||||| |||||||||||||| |||||
Sbjct: 55554 aagcaaggcaatcagaaaggaagcagctt 55582

>gb|AF188025.4| Homo sapiens chromosome 8 clone CTD-2339E5 map q21.3, complete sequence
          Length = 98522

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 217   aagcaaggtaatcagaaaggaaggagctt 245
             |||||||| |||||||||||||| |||||
Sbjct: 88207 aagcaaggcaatcagaaaggaagcagctt 88235

>emb|AL603708.13| Mouse DNA sequence from clone RP23-381C21 on chromosome 11, complete
             sequence
          Length = 198743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 154   aacaaaaacaaaaacggaaccatgt 178
             |||||||||||||| ||||||||||
Sbjct: 48467 aacaaaaacaaaaaaggaaccatgt 48491

>gb|AC100799.2| Homo sapiens chromosome 8, clone RP11-1082F24, complete sequence
          Length = 194149

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 217    aagcaaggtaatcagaaaggaaggagctt 245
              |||||||| |||||||||||||| |||||
Sbjct: 177279 aagcaaggcaatcagaaaggaagcagctt 177307

>ref|XM_696138.1| PREDICTED: Danio rerio similar to zinc finger protein 289, ID1
            regulated (LOC572425), partial mRNA
          Length = 1672

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 158  aaaacaaaaacggaaccatgt 178
            |||||||||||||||||||||
Sbjct: 1597 aaaacaaaaacggaaccatgt 1617

>gb|AC098807.3| Papio anubis clone RP41-157N15, complete sequence
          Length = 212643

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 152    acaacaaaaacaaaaacggaa 172
              |||||||||||||||||||||
Sbjct: 102776 acaacaaaaacaaaaacggaa 102796

>gb|AC003016.1|AC003016 Human BAC clone CTB-134C19 from 8q21, complete sequence
          Length = 93216

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 217   aagcaaggtaatcagaaaggaaggagctt 245
             |||||||| |||||||||||||| |||||
Sbjct: 30310 aagcaaggcaatcagaaaggaagcagctt 30282

>gb|AC132871.7| Mus musculus chromosome 1, clone RP24-387A12, complete sequence
          Length = 188649

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    ctaggacaacaaaaacaaaa 166
              ||||||||||||||||||||
Sbjct: 154114 ctaggacaacaaaaacaaaa 154133

>gb|AC140047.8| Mus musculus chromosome 17, clone RP23-233F10, complete sequence
          Length = 186632

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   cactaggacaacaaaaacaa 164
             ||||||||||||||||||||
Sbjct: 73454 cactaggacaacaaaaacaa 73473

>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete
             sequence
          Length = 205369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   acatggaaggtgaccaggca 201
             ||||||||||||||||||||
Sbjct: 56190 acatggaaggtgaccaggca 56171

>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21,
             complete sequence
          Length = 131428

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataacaacaaaaagaagcaa 222
             ||||||||||||||||||||
Sbjct: 17957 ataacaacaaaaagaagcaa 17976

>emb|CR377220.10| Zebrafish DNA sequence from clone DKEY-279E10 in linkage group 1,
             complete sequence
          Length = 169012

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aggacaacaaaaacaaaaac 168
             ||||||||||||||||||||
Sbjct: 67235 aggacaacaaaaacaaaaac 67254

>gb|AC124175.2| Mus musculus BAC clone RP23-183N18 from 1, complete sequence
          Length = 227946

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    gtaatcagaaaggaaggagc 243
              ||||||||||||||||||||
Sbjct: 206993 gtaatcagaaaggaaggagc 207012

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   aggacaacaaaaacaaaaac 168
             ||||||||||||||||||||
Sbjct: 73914 aggacaacaaaaacaaaaac 73895

>emb|AL356252.10| Human DNA sequence from clone RP11-468L10 on chromosome 13, complete
              sequence
          Length = 143690

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    cactaggacaacaaaaacaaaaac 168
              |||||||| |||||||||||||||
Sbjct: 112195 cactaggaaaacaaaaacaaaaac 112172

>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence
          Length = 177312

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ataacaacaaaaagaagcaa 222
              ||||||||||||||||||||
Sbjct: 139152 ataacaacaaaaagaagcaa 139133

>gb|AC016764.8| Homo sapiens BAC clone RP11-549G13 from 2, complete sequence
          Length = 155868

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataacaacaaaaagaagcaa 222
             ||||||||||||||||||||
Sbjct: 84323 ataacaacaaaaagaagcaa 84342

>emb|BX088714.18| Zebrafish DNA sequence from clone DKEY-16F19 in linkage group 18,
              complete sequence
          Length = 167148

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    aaaaacaaaaacggaaccat 176
              ||||||||||||||||||||
Sbjct: 154940 aaaaacaaaaacggaaccat 154959

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       aggtcatgcatatatataac 103
                ||||||||||||||||||||
Sbjct: 17278025 aggtcatgcatatatataac 17278044

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 164      aaaacggaaccatgtgatac 183
                ||||||||||||||||||||
Sbjct: 16006451 aaaacggaaccatgtgatac 16006432

>gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete sequence
          Length = 346296

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    tgctacctaccatggcttca 372
              ||||||||||||||||||||
Sbjct: 315257 tgctacctaccatggcttca 315276

>gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosome ul, complete sequence
          Length = 233533

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    acatctggttctgactgaac 319
              ||||||||||||||||||||
Sbjct: 195877 acatctggttctgactgaac 195896

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 326     cccacatggcgccaatgccg 345
               ||||||||||||||||||||
Sbjct: 4845072 cccacatggcgccaatgccg 4845053

>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1045B05
          Length = 140992

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aggtcatgcatatatataac 103
             ||||||||||||||||||||
Sbjct: 64897 aggtcatgcatatatataac 64916

>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBa0054F02
          Length = 180651

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   aggtcatgcatatatataac 103
            ||||||||||||||||||||
Sbjct: 1938 aggtcatgcatatatataac 1957

>dbj|AP004852.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1371_D04
          Length = 105468

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   aaaacggaaccatgtgatac 183
             ||||||||||||||||||||
Sbjct: 37386 aaaacggaaccatgtgatac 37367

>dbj|AP004787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0403C01
          Length = 145635

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  aaaacggaaccatgtgatac 183
            ||||||||||||||||||||
Sbjct: 4685 aaaacggaaccatgtgatac 4666

>gb|AC136517.3| Mus musculus BAC clone RP23-259O15 from 1, complete sequence
          Length = 220632

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    gtaatcagaaaggaaggagc 243
              ||||||||||||||||||||
Sbjct: 189754 gtaatcagaaaggaaggagc 189735

>emb|AL807390.11| Mouse DNA sequence from clone RP23-223F2 on chromosome 4, complete
             sequence
          Length = 150847

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   aaaaagaagcaaggtaatca 230
             ||||||||||||||||||||
Sbjct: 52152 aaaaagaagcaaggtaatca 52171


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,580,090
Number of Sequences: 3902068
Number of extensions: 5580090
Number of successful extensions: 267629
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 267371
Number of HSP's gapped (non-prelim): 258
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)