ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart44a10 |
|---|---|
| Clone Library Name | barley_pub |
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 43.9 bits (102), Expect = 2e-04 Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Frame = -1 Query: 451 GVLEADELQRCI-----GFATSDVVRAKAELWREKARAAAAVGGSSERNLRAFV 305 GV E++RC+ G + R A WR++ARAA A GGSS+RNL FV Sbjct: 408 GVFLRGEVERCVRAVMDGGEAASAARKAAGEWRDRARAAVAPGGSSDRNLDEFV 461
>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid| glucosyltransferase) (Limonoid GTase) (LGTase) Length = 511 Score = 39.3 bits (90), Expect = 0.005 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 4/52 (7%) Frame = -1 Query: 448 VLEADELQRCIGFATSD----VVRAKAELWREKARAAAAVGGSSERNLRAFV 305 ++ DE+++C+ AT+ + A W+++A A A GGSS+RN++AFV Sbjct: 410 IISRDEVEKCLLEATAGPKAVALEENALKWKKEAEEAVADGGSSDRNIQAFV 461
>PEX2_YEAST (P32800) Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal| protein PAS5) (Protein CRT1) Length = 271 Score = 36.6 bits (83), Expect = 0.034 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 5/47 (10%) Frame = +3 Query: 297 CPVTNALRFLSDEPPTAAA-----ARAFSLHSSALARTTSEVAKPMH 422 C VTN LRFL+ E P A A RAF++HS+ L R S +A + Sbjct: 122 CDVTNFLRFLAAEGPNARAFLSPLYRAFNVHSTRLIRDGSAIASEFY 168
>SORCN_CRIGR (P05044) Sorcin (22 kDa protein) (CP-22) (V19)| Length = 198 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = -1 Query: 472 ATVSEKDGVLEADELQRCI 416 A+V+ +DG ++ADELQRC+ Sbjct: 40 ASVAGQDGQIDADELQRCL 58
>VIE2_BHV4D (Q02479) Immediate-early protein 2 (IE2)| Length = 552 Score = 28.9 bits (63), Expect = 7.1 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%) Frame = +3 Query: 195 SAKLLLLHAGDL---VRRIMQRMQAGMP----AG*LPARATCPVTNALRFLSDEPPTAAA 353 SA LL L A +L V+ + + G+P AG +P R CPV + SD P + Sbjct: 363 SASLLSLQAENLPTSVQNSVAQETTGLPPQVPAGEMPPRGNCPVEDHGLLNSDAPDDLSG 422 Query: 354 ARAFSLHSS--ALARTTSEVAKPM 419 + L +S L ++ VA P+ Sbjct: 423 KGDYDLFTSDDLLPMSSGNVAIPV 446
>YAGH_ECOLI (P77713) Putative beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan| xylohydrolase) (Xylan 1,4-beta-xylosidase) Length = 536 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +2 Query: 203 TATPTCWRFGSQDHAAHASRHAGW--LVAGEG 292 T TP C+ G AH RHAGW L+A EG Sbjct: 178 TGTPLCYTEG-----AHLYRHAGWYYLMAAEG 204
>GCSH_TROWT (P64215) Glycine cleavage system H protein| Length = 121 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/51 (29%), Positives = 32/51 (62%) Frame = +1 Query: 37 QNFTVRRNECLGKMRTAFDLSQVAATMSNRIIYDSEEVRIESSRLVSCTSS 189 Q+ + + EC+G++ + +S++ + +S R+I +E+V I S L++ SS Sbjct: 46 QDALIVQGECVGEIESTKSVSEIYSPVSGRVIAVNEDV-ISSPGLLNSDSS 95
>GCSH_TROW8 (P64216) Glycine cleavage system H protein| Length = 121 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/51 (29%), Positives = 32/51 (62%) Frame = +1 Query: 37 QNFTVRRNECLGKMRTAFDLSQVAATMSNRIIYDSEEVRIESSRLVSCTSS 189 Q+ + + EC+G++ + +S++ + +S R+I +E+V I S L++ SS Sbjct: 46 QDALIVQGECVGEIESTKSVSEIYSPVSGRVIAVNEDV-ISSPGLLNSDSS 95
>SORCN_PONPY (Q5R4U9) Sorcin| Length = 198 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -1 Query: 472 ATVSEKDGVLEADELQRCI 416 A V+ +DG ++ADELQRC+ Sbjct: 40 AAVAGQDGQIDADELQRCL 58
>SORCN_MOUSE (Q6P069) Sorcin| Length = 198 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -1 Query: 472 ATVSEKDGVLEADELQRCI 416 A V+ +DG ++ADELQRC+ Sbjct: 40 AAVAGQDGQIDADELQRCL 58
>SORCN_HUMAN (P30626) Sorcin (22 kDa protein) (CP-22) (V19)| Length = 198 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -1 Query: 472 ATVSEKDGVLEADELQRCI 416 A V+ +DG ++ADELQRC+ Sbjct: 40 AAVAGQDGQIDADELQRCL 58
>NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 precursor (NEL-like| protein 1) (Nel-related protein 1) Length = 810 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 11/58 (18%) Frame = +1 Query: 127 IIYDSEEVRIESSRLVSCTS----------SCQALNCYSYMLAIWFAGS-CSACKPAC 267 ++Y ++ ++ +CT SC LNC L + AG C C+P C Sbjct: 278 LLYRDQDSWVDGDHCRNCTCKSGAVECRRMSCPPLNCSPDSLPVHIAGQCCKVCRPKC 335
>ECM1_HUMAN (Q16610) Extracellular matrix protein 1 precursor (Secretory| component p85) Length = 540 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = -2 Query: 237 CEPNRQHVGVAV*RLAGRRTRDETRGLDPYLFAVVNNS-IRHCSCYLGKIECRSHLAEAF 61 C PNRQHV L TR + F + S HC + ++EC + E Sbjct: 181 CLPNRQHVVYGPWNLPQSSYSHLTRQGETLNFLEIGYSRCCHCRSHTNRLECAKLVWEEA 240 Query: 60 VSPYCK 43 +S +C+ Sbjct: 241 MSRFCE 246 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,322,758 Number of Sequences: 219361 Number of extensions: 995484 Number of successful extensions: 3143 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3016 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3136 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
