Clone Name | rbart43h08 |
---|---|
Clone Library Name | barley_pub |
>5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4| Length = 410 Score = 47.4 bits (111), Expect = 8e-06 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = -1 Query: 399 GPVFVTAFNPLCMIITAILGSIILKEEINLGSXXXXXXXXXGLYFLIWGKSKDE 238 GPVFV + P+ I AI+ SIIL E+ LG GLY ++WGKS+++ Sbjct: 291 GPVFVAVYQPVQTIAVAIMASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEEK 344
>CCS_PIG (Q6PWT7) Copper chaperone for superoxide dismutase (Superoxide| dismutase copper chaperone) Length = 274 Score = 33.1 bits (74), Expect = 0.16 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -3 Query: 394 GVCHGIQPALHDHNRHLGLHHSQGGDQSRKCDWCCDH 284 G G++P LH GLH Q GD +R C+ C DH Sbjct: 117 GTIDGLKPGLH------GLHVHQFGDLTRNCNSCGDH 147
>CCS_MOUSE (Q9WU84) Copper chaperone for superoxide dismutase (Superoxide| dismutase copper chaperone) Length = 274 Score = 33.1 bits (74), Expect = 0.16 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -3 Query: 394 GVCHGIQPALHDHNRHLGLHHSQGGDQSRKCDWCCDH 284 G G++P LH GLH Q GD +R C+ C DH Sbjct: 117 GTIDGLEPGLH------GLHVHQYGDLTRDCNSCGDH 147
>CCS_RAT (Q9JK72) Copper chaperone for superoxide dismutase (Superoxide| dismutase copper chaperone) Length = 274 Score = 31.6 bits (70), Expect = 0.47 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -3 Query: 394 GVCHGIQPALHDHNRHLGLHHSQGGDQSRKCDWCCDH 284 G G++P LH GLH Q GD ++ C C DH Sbjct: 117 GTIDGLEPGLH------GLHVHQYGDLTKDCSSCGDH 147
>LPXH_RALSO (Q8Y081) UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.-)| Length = 268 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -3 Query: 382 GIQPALHDHNRHLGLHHSQGGDQSRKCDWCCDH 284 GI +H H LHH GG++ DW DH Sbjct: 214 GIPLLIHGHTHRPRLHHEPGGERWVLSDWDFDH 246
>K0323_HUMAN (O15037) Protein KIAA0323| Length = 678 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -1 Query: 153 KQELGNGNGGHVIGVETPAANGHC*SKA-SIGVAILQYIRS 34 K+E+ G GG + E P A+G C A S G ++LQ + + Sbjct: 309 KEEIALGGGGFCVHREPPGAHGSCHRAAQSRGASLLQRLHN 349
>ERG24_SEPLY (O13597) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) Length = 512 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -3 Query: 106 DAGSQWTLLVKGIDWSSYTPIHTIIDPSVYIFPGI 2 D+ +WT L+ GI + P+ II SVY+F + Sbjct: 273 DSMRKWTPLLLGIHVLTIHPVIVIISQSVYVFDAL 307
>DOF16_ARATH (Q9SX97) Hypothetical Dof zinc finger protein DOF1.6 (AtDOF1.6)| Length = 209 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -1 Query: 192 LTSMTNGHASVSSKQELGNGNGG 124 +T++ +GH S +S LG+GNGG Sbjct: 120 VTNLISGHGSFASLLGLGSGNGG 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,268,093 Number of Sequences: 219361 Number of extensions: 744214 Number of successful extensions: 2242 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2239 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)