Clone Name | rbart43h03 |
---|---|
Clone Library Name | barley_pub |
>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)| Length = 231 Score = 39.7 bits (91), Expect = 0.003 Identities = 15/19 (78%), Positives = 19/19 (100%) Frame = -2 Query: 421 SPEKVYDFIGLLKKRYGIE 365 SPEKVYDF+G+LKK+YG+E Sbjct: 213 SPEKVYDFVGVLKKKYGVE 231
>CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP| pyrophosphate-lyase) (Adenylyl cyclase) Length = 1407 Score = 32.0 bits (71), Expect = 0.62 Identities = 13/47 (27%), Positives = 24/47 (51%) Frame = +1 Query: 79 GIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANN 219 G GG + P +++ + HN HP+ L+ P+ NH++ N+ Sbjct: 68 GGGGGGGHINPMHLNLNSITNNHNNHHNHHPNTLSTPHNNNHNNNNH 114
>CNG_ICTPU (P55934) Cyclic nucleotide-gated cation channel| Length = 682 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Frame = +2 Query: 110 HRRPGLTHDTHIEQEST-TRTHTA*PNHILPTTHTRTIYSTNKE 238 H GL D E E THT H P THTRT TN E Sbjct: 636 HTGLGLLSDNEAEGEHAGVPTHTHADIHAQPETHTRTSAETNSE 679
>DHPH_BACBA (Q59224) Phenylalanine dehydrogenase (EC 1.4.1.20) (PheDH)| Length = 380 Score = 29.3 bits (64), Expect = 4.0 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -1 Query: 143 CVCHVSTLVFGGGSTELPPAIPFLYPLRAMNKL 45 C+ V GGG + +P A+ LY ++A NK+ Sbjct: 142 CIVGVPEAYGGGGDSSIPTAMGVLYGIKATNKM 174
>GPI16_SCHPO (O94380) GPI transamidase component PIG-T homolog precursor| Length = 545 Score = 29.3 bits (64), Expect = 4.0 Identities = 22/74 (29%), Positives = 29/74 (39%) Frame = +1 Query: 73 RNGIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANNLFH**RKKYPN 252 RNG G + PP + H E HCL Y+T H ++LFH K P Sbjct: 247 RNGRRKGKTTFQPPSE-----YCH--DEDMDSLHCLMSGYSTEHHTVDDLFH----KVPK 295 Query: 253 ARTAGHPNRSIIFI 294 R S +F+ Sbjct: 296 ERCLLSSTFSDVFV 309
>LOLA4_DROME (Q867Z4) Longitudinals lacking protein, isoforms F/I/K/T| Length = 970 Score = 28.9 bits (63), Expect = 5.3 Identities = 21/92 (22%), Positives = 35/92 (38%) Frame = +2 Query: 107 PHRRPGLTHDTHIEQESTTRTHTA*PNHILPTTHTRTIYSTNKERNIQTHALQATQIAP* 286 PH + H HI Q + H + T H + T+++ + Q H Q + P Sbjct: 588 PHTSSTIIHPHHIIQHVSQEPHHQEHHQQHQTIHIEEVPQTSQQHHQQQHHHQLQTVQPT 647 Query: 287 FLSVASFRQAGRPAGLRVHGGPPARLLDAVPL 382 V S A + + G +L D+ P+ Sbjct: 648 HTQVQSIITAHPGQTINLVGLRNVQLADSKPI 679
>UHPB_SALTY (P27668) Sensor protein uhpB (EC 2.7.13.3)| Length = 500 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -1 Query: 227 WNKLFACEWLVVYGWVRQCGCVLCSPALCVCHVSTLVFGGGSTELPPAIPFLY 69 W L EWL+VY W+ Q + + H+ L+ G T LP A+ Y Sbjct: 60 WPVLLGAEWLLVY-WLAQ--------EVALAHLPLLMIGSVLTLLPVALTSRY 103
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +3 Query: 255 THCRPPKSLHNFYL*LPSGRPAGRPACACMAVRRRAYSMPY 377 +HCRP H+F+L + P G C CM V ++ S Y Sbjct: 1305 SHCRP----HHFHL--SASNPEGCLPCFCMGVTQQCASSSY 1339
>COPB2_DROME (O62621) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 914 Score = 28.1 bits (61), Expect = 9.0 Identities = 9/27 (33%), Positives = 19/27 (70%) Frame = -2 Query: 283 WSDLGGLQCVRLDISFFISGINCSRVS 203 W++ G L C+ D S+F+ G++ ++V+ Sbjct: 472 WNESGSLVCLATDDSYFVLGVDTAQVA 498 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,408,865 Number of Sequences: 219361 Number of extensions: 1521928 Number of successful extensions: 3984 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3817 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3968 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)