>HD_FUGRU (P51112) Huntingtin (Huntington disease protein homolog) (HD protein)|
          Length = 3148

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 26/102 (25%), Positives = 45/102 (44%)
 Frame = -3

Query: 414  SFTSAACSVKTWGTTGSRAPSTWHGSSRWLQQGIFSVIL*HFTPSLWC*SKKNTPLFNLS 235
            +FT AA  V  W     + P +       LQ  +  + L    P +W  +K +TP +N  
Sbjct: 2254 TFTCAATEVVVWHLLQDQLPLSVD-----LQWALSCLCLALQQPCVW--NKLSTPEYNTH 2306

Query: 234  PCTFSINYYEM*SLLVEHRYIINPQSLHIEKKKKRGVKSTDD 109
             C+     Y +  +++        Q LH E+KK + ++ +DD
Sbjct: 2307 TCSL---IYCLHHIILAVAVSPGDQLLHPERKKTKALRHSDD 2345

>Y1396_METJA (Q58791) Hypothetical protein MJ1396|
          Length = 2894

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
 Frame = -3

Query: 264 KKNTPLFNLSPC------TFSINYYEM*SLLVEHRYIINPQSLHIEKKK 136
           KKN  L N S        TF+++YY++ + L+++R+I+   S ++++ K
Sbjct: 294 KKNVILGNYSVVVDGIKKTFAVDYYKINAKLIDNRFIVGNVSYYVKEPK 342

>POL1_GCMV (P13025) RNA1 polyprotein (P1) [Contains: P1A protein (1A)|
           (Protease cofactor); Putative ATP-dependent helicase (EC
           3.6.1.-) (NTP-binding protein) (NTB) (1B)
           (Membrane-binding protein); Viral genome-linked protein
           (1C-VPg); Picornain 3C-like pr
          Length = 2252

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -3

Query: 408 TSAACSVKTWGTTGSRAPSTWHGSSRWLQQGIFSVIL*HFTPSL 277
           TSAACSVK     G         + + L +G+FSV++ HF  +L
Sbjct: 429 TSAACSVKNAFLDGCEL------TGKRLSEGVFSVVIGHFREAL 466

>FTSZ_MYCKA (Q9KH25) Cell division protein ftsZ|
          Length = 386

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 383 RGVQQGLGHRLLGMAAADGSNREYFLSYCSISPPLFGASLK 261
           +GV  G G  L+G+ +A G  R    +  +I+ PL  AS++
Sbjct: 212 KGVMSGAGTALMGIGSARGDGRALKAAEIAINSPLLEASME 252

>TILS_SCHPO (Q10441) Probable tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 456

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/77 (24%), Positives = 40/77 (51%)
 Frame = -1

Query: 377 VQQGLGHRLLGMAAADGSNREYFLSYCSISPPLFGASLKKTLLFLIYHLVPLASTIMKCE 198
           +++ +GHR LG+A + G +      +   S  +FG    + + F++ H +   ST    +
Sbjct: 16  IRRRVGHRRLGIAVSGGVDSMLLSWFMKESQIMFGWP-NQFIAFVVDHRIRKNSTEEALQ 74

Query: 197 AYLWNIDT*LILRVFIS 147
             +WN++  LI  V+++
Sbjct: 75  T-IWNLNRMLIPNVYLN 90

>SPT5_YEAST (P27692) Transcription elongation factor SPT5 (Chromatin elongation|
            factor SPT5)
          Length = 1063

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 402  AACSVKTWGTTGSRAPSTWHGSSRW 328
            A      WG  G+ A STW G+S W
Sbjct: 953  AGGGASAWGGQGTGATSTWGGASAW 977

>NU4M_ASPAM (P03913) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 488

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 13  PIIDILFYLIKLGYSGTRENKNFV 84
           PI  +LF+++ LG SGT    NF+
Sbjct: 369 PIFSVLFFILSLGNSGTPLTLNFI 392


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,375,944
Number of Sequences: 219361
Number of extensions: 1204897
Number of successful extensions: 2687
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2687
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)