ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart43f09 |
|---|---|
| Clone Library Name | barley_pub |
>AMO_LENCU (P49252) Amine oxidase [copper-containing] precursor (EC 1.4.3.6)| (Fragment) Length = 667 Score = 107 bits (266), Expect = 2e-23 Identities = 45/73 (61%), Positives = 56/73 (76%) Frame = -2 Query: 478 LYADQSTGDDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPAN 299 LY D S GDD L W++KNR + N+DIV+W+ VGIHH+P Q+DFP+MP +S FELRP N Sbjct: 585 LYVDHSRGDDTLAVWTKKNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTN 644 Query: 298 FFERNSLLTTRPP 260 FFERN +L T PP Sbjct: 645 FFERNPVLKTLPP 657
>AMO_PEA (Q43077) Amine oxidase [copper-containing] precursor (EC 1.4.3.6)| Length = 674 Score = 102 bits (254), Expect = 5e-22 Identities = 43/73 (58%), Positives = 55/73 (75%) Frame = -2 Query: 478 LYADQSTGDDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPAN 299 LY D S GDD L W+++NR + N+DIV+W+ VGIHH+P Q+DFP+MP +S FELRP N Sbjct: 592 LYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTN 651 Query: 298 FFERNSLLTTRPP 260 FFERN +L T P Sbjct: 652 FFERNPVLKTLSP 664
>AMO2_ARTS1 (Q07123) Copper methylamine oxidase precursor (EC 1.4.3.6) (MAOXII)| Length = 648 Score = 72.8 bits (177), Expect = 4e-13 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%) Frame = -2 Query: 475 YADQSTG-DDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPAN 299 Y +Q+TG DDGL W++K+R + + D+V+WYT G+HH+ +D+PVMP + GF L P Sbjct: 559 YPNQATGADDGLHIWTQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPHG 618 Query: 298 FFERNSLLTTRPPGLDQPPLVNCSCTGD 215 FF +N P L+ P + + TG+ Sbjct: 619 FFNQN-------PTLNLPTSTSTTQTGE 639
>AMO1_ARTS1 (Q07121) Copper amine oxidase precursor (EC 1.4.3.6) (MAOXI)| Length = 648 Score = 72.8 bits (177), Expect = 4e-13 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%) Frame = -2 Query: 475 YADQSTG-DDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPAN 299 Y +Q+TG DDGL W++K+R + + D+V+WYT G+HH+ +D+PVMP + GF L P Sbjct: 559 YPNQATGADDGLHIWTQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPHG 618 Query: 298 FFERNSLLTTRPPGLDQPPLVNCSCTGD 215 FF +N P L+ P + + TG+ Sbjct: 619 FFNQN-------PTLNLPTSTSTTQTGE 639
>PAOX_ARTGO (P46881) Phenylethylamine oxidase precursor (EC 1.4.3.6) (Amine| oxidase) Length = 638 Score = 64.3 bits (155), Expect = 2e-10 Identities = 26/67 (38%), Positives = 46/67 (68%) Frame = -2 Query: 475 YADQSTGDDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPANF 296 + +Q +G GL ++ ++R + +DIV+W+T G+ H P +D+P+MP + GF+LRP F Sbjct: 557 FVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGF 616 Query: 295 FERNSLL 275 F+R+ +L Sbjct: 617 FDRSPVL 623
>AMO_SCHPO (O42890) Putative copper amine oxidase (EC 1.4.3.6)| Length = 794 Score = 61.2 bits (147), Expect = 1e-09 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Frame = -2 Query: 475 YADQSTGDD--GLVAW--SEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELR 308 YA Q++ D GL W + N ++N DIV+W+T G+ H P +DFP+MP S L+ Sbjct: 565 YAPQASDDTPKGLSKWISDDPNAQIKNTDIVVWHTFGMIHFPAPEDFPIMPAESIHLFLQ 624 Query: 307 PANFFERNSLLTT 269 P NFF+ N L T Sbjct: 625 PRNFFKHNPALDT 637
>AMOH_ARTGO (Q59118) Histamine oxidase (EC 1.4.3.6) (Copper amine oxidase)| Length = 683 Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Frame = -2 Query: 475 YADQSTGDDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPANF 296 + +Q G L A+ ++R + +D+V+W++ G+ H P +D+P+MP + GF L+P F Sbjct: 576 FVNQHPGGAVLPAYVAQDRDIDGQDLVVWHSFGLTHFPRPEDWPIMPVDTTGFTLKPHGF 635 Query: 295 FERNSLLTTRPPGLDQPPLVNCSC-TGDPR*H 203 F+ N P L+ P C TG R H Sbjct: 636 FDEN-------PTLNVPSSAAGHCGTGSEREH 660
>AMO_ECOLI (P46883) Copper amine oxidase precursor (EC 1.4.3.6) (Tyramine| oxidase) (2-phenylethylamine oxidase) Length = 757 Score = 53.5 bits (127), Expect = 3e-07 Identities = 25/67 (37%), Positives = 39/67 (58%) Frame = -2 Query: 475 YADQSTGDDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPANF 296 Y ++ST D GL +S+ N ++ N D V+W T G H+ +++P+MPT L+P NF Sbjct: 684 YPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKPWNF 743 Query: 295 FERNSLL 275 F+ L Sbjct: 744 FDETPTL 750
>ABP1_HUMAN (P19801) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) (Kidney amine oxidase) (KAO) Length = 751 Score = 52.4 bits (124), Expect = 6e-07 Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFP--VMPTVSGGFELRPANFFERNSLLTTR 266 N + NED+V W TVG HIP+ +D P P S GF LRP NFF + L +R Sbjct: 657 NENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASR 711
>ABP1_MOUSE (Q8JZQ5) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) Length = 751 Score = 52.0 bits (123), Expect = 8e-07 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFERNSLLTTR 266 N + NED+V W TVG HIP+ +D P T GF +RP NFFE + L +R Sbjct: 657 NENIENEDLVAWVTVGFLHIPHSEDVPNTATPGNCVGFLIRPFNFFEEDPSLASR 711
>ABP1_RAT (P36633) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) Length = 746 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFP--VMPTVSGGFELRPANFFERNSLLTTR 266 N + +ED+V W TVG HIP+ +D P P S GF LRP NFF + L +R Sbjct: 652 NENIEDEDLVAWVTVGFLHIPHSEDVPNTATPGNSVGFLLRPFNFFPEDPSLASR 706
>AMO_KLEAE (P49250) Copper amine oxidase precursor (EC 1.4.3.6) (Monamine| oxidase) (Tyramine oxidase) Length = 755 Score = 48.9 bits (115), Expect = 7e-06 Identities = 22/67 (32%), Positives = 38/67 (56%) Frame = -2 Query: 475 YADQSTGDDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPANF 296 Y ++S D GL +++ + ++ N D V+W T G H+ +++P+MPT L+P NF Sbjct: 684 YPNRSAHDTGLGQYAKDDESLTNHDDVVWITTGTTHVARAEEWPIMPTEWALALLKPWNF 743 Query: 295 FERNSLL 275 F+ L Sbjct: 744 FDETPTL 750
>AMO_PICAN (P12807) Peroxisomal copper amine oxidase (EC 1.4.3.6) (Methylamine| oxidase) Length = 692 Score = 47.8 bits (112), Expect = 2e-05 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = -2 Query: 475 YADQSTGDD--GLVAW-SEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRP 305 + Q +GD G+ W + + + N DI+ ++T GI H P +DFP+MP LRP Sbjct: 586 HVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRP 645 Query: 304 ANFFERNSLLTTRPPGLDQPP 242 +FF N PGLD P Sbjct: 646 RHFFTEN-------PGLDIQP 659
>AOC3_RAT (O08590) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) (VP97) Length = 762 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFERN 284 N + ED+V W T G HIP+ +D P TV GF LRP NFF+ + Sbjct: 665 NETIAGEDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDED 713
>AMO1_ASPNG (Q12556) Copper amine oxidase 1 (EC 1.4.3.6)| Length = 671 Score = 46.2 bits (108), Expect = 4e-05 Identities = 26/68 (38%), Positives = 36/68 (52%) Frame = -2 Query: 430 EKNRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSGGFELRPANFFERNSLLTTRPPGLD 251 ++ +V + D+V+W T GI H P +D+PVMP +RPA+FF N P LD Sbjct: 597 KRGDSVVDTDVVVWSTFGITHNPRVEDWPVMPVEIFQLMIRPADFFTAN-------PSLD 649 Query: 250 QPPLVNCS 227 P N S Sbjct: 650 VPSDKNIS 657
>AOC3_MOUSE (O70423) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) Length = 764 Score = 46.2 bits (108), Expect = 4e-05 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTV--SGGFELRPANFFERN 284 N + ED+V W T G HIP+ +D P T S GF LRP NFF+ + Sbjct: 665 NETIAGEDLVAWVTAGFLHIPHAEDIPNTVTAGNSVGFFLRPYNFFDED 713
>AOCY_BOVIN (O46406) Copper amine oxidase, lung isozyme precursor (EC 1.4.3.6)| (Amine oxidase [copper-containing]) (BOLAO) Length = 762 Score = 45.8 bits (107), Expect = 6e-05 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFER 287 N + +D+V W T G HIP+ +D P TV GF LRP NFF++ Sbjct: 665 NETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQ 712
>AOCX_BOVIN (Q29437) Copper amine oxidase, liver isozyme precursor (EC 1.4.3.6)| (Amine oxidase [copper-containing]) (Serum amine oxidase) (SAO) Length = 762 Score = 45.8 bits (107), Expect = 6e-05 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFER 287 N + +D+V W T G HIP+ +D P TV GF LRP NFF++ Sbjct: 665 NETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQ 712
>AOC3_PONPY (Q5R9I0) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) Length = 762 Score = 45.8 bits (107), Expect = 6e-05 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFERN 284 N + +D+V W T G HIP+ +D P TV GF LRP NFF+ + Sbjct: 665 NETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDED 713
>AOC3_HUMAN (Q16853) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) (HPAO) Length = 762 Score = 45.8 bits (107), Expect = 6e-05 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFERN 284 N + +D+V W T G HIP+ +D P TV GF LRP NFF+ + Sbjct: 665 NETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDED 713
>AOC3_BOVIN (Q9TTK6) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) Length = 762 Score = 45.8 bits (107), Expect = 6e-05 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFERN 284 N + +D+V W T G HIP+ +D P TV GF LRP NFF+ + Sbjct: 665 NETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDED 713
>AOC2_MOUSE (Q812C9) Retina-specific copper amine oxidase precursor (EC| 1.4.3.6) (RAO) (Amine oxidase [copper-containing]) Length = 757 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFERN 284 N + ED+V W T HIP+ +D P TV GF LRP NFF + Sbjct: 663 NETLLGEDLVAWVTASFLHIPHAEDIPNTVTVGNRVGFLLRPYNFFNED 711
>AOC2_HUMAN (O75106) Retina-specific copper amine oxidase precursor (EC| 1.4.3.6) (RAO) (Amine oxidase [copper-containing]) Length = 756 Score = 42.7 bits (99), Expect = 5e-04 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = -2 Query: 424 NRAVRNEDIVLWYTVGIHHIPYQDDFPVMPTVSG--GFELRPANFFERN 284 N + ED+V W T HIP+ +D P T+ GF LRP NFF+ + Sbjct: 662 NETLLGEDLVAWVTASFLHIPHAEDIPNTVTLGNRVGFLLRPYNFFDED 710
>ATF7_PONPY (Q5R9C9) Cyclic AMP-dependent transcription factor ATF-7| (Activating transcription factor 7) (Transcription factor ATF-A) Length = 483 Score = 32.3 bits (72), Expect = 0.66 Identities = 26/90 (28%), Positives = 41/90 (45%) Frame = +2 Query: 26 NE**KIKRPLAACLDQLQTVPKTTTSGYVEAPKHSVQQNTHQRYNLSYDDAKSVSHGRDV 205 NE ++K+ L A D T + T GY+E+PK S + + + A + S+G V Sbjct: 383 NEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSATAPSNGLSV 442 Query: 206 SSGITGARAVHERRLVKPGRSRCEQRVPLE 295 S A AV L + R E +P++ Sbjct: 443 RS---AAEAVATSVLTQMASQRTELSMPIQ 469
>ATF7_HUMAN (P17544) Cyclic AMP-dependent transcription factor ATF-7| (Activating transcription factor 7) (Transcription factor ATF-A) Length = 494 Score = 32.3 bits (72), Expect = 0.66 Identities = 26/90 (28%), Positives = 41/90 (45%) Frame = +2 Query: 26 NE**KIKRPLAACLDQLQTVPKTTTSGYVEAPKHSVQQNTHQRYNLSYDDAKSVSHGRDV 205 NE ++K+ L A D T + T GY+E+PK S + + + A + S+G V Sbjct: 394 NEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSATAPSNGLSV 453 Query: 206 SSGITGARAVHERRLVKPGRSRCEQRVPLE 295 S A AV L + R E +P++ Sbjct: 454 RS---AAEAVATSVLTQMASQRTELSMPIQ 480
>IRF6_HUMAN (O14896) Interferon regulatory factor 6 (IRF-6)| Length = 467 Score = 32.0 bits (71), Expect = 0.87 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = -2 Query: 457 GDDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVM 338 G G W EK+ V ED HH+P QD FP + Sbjct: 127 GSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFL 166
>PSAB_MESVI (Q9MUR7) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG S P + S + G SN L +G Sbjct: 95 HFGQPAVEAFTRGGASGPVNISYSGVYQWWYTIGMRSNTDLYIG 138
>PSAB_CHLRE (P09144) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 735 Score = 31.2 bits (69), Expect = 1.5 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG S P + S + G +N L VG Sbjct: 96 HFGQPAVEAFTRGGASGPVNISTSGVYQWWYTIGMRTNQDLYVG 139
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 31.2 bits (69), Expect = 1.5 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = -3 Query: 378 ASTTYHTRTTSPSCRPSAAGSSSGQPTSSRGTRCSQRDRPGLTS-RLS*TARAPVIPDDT 202 +ST+ T TTSP+ + SS+ PTS+ T S P T+ + T +P+ T Sbjct: 257 SSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAPSSTTVTYTSTTASPITSTIT 316 Query: 201 SRPCDTDLASS 169 S T L S Sbjct: 317 SVNLQTSLKYS 327
>SPPA_ECOLI (P08395) Protease 4 (EC 3.4.21.-) (Protease IV) (Endopeptidase IV)| (Signal peptide peptidase) Length = 618 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +3 Query: 252 SSPGGLVVSNEFLSKKL-AGRSSNPPLTVGMTGKSSWYGMW 371 +SPGG V ++E + +L A R++ P+ V M G ++ G W Sbjct: 373 NSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYW 413
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 30.0 bits (66), Expect = 3.3 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 378 ASTTYHTRTTSPSCRPSAAGSSSGQPTSSRGTR 280 +++T+H T+SP+ RP +SG SS T+ Sbjct: 688 STSTHHVSTSSPAPRPGTTSQASGPGNSSTSTK 720
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 30.0 bits (66), Expect = 3.3 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 378 ASTTYHTRTTSPSCRPSAAGSSSGQPTSSRGTR 280 +++T+H T+SP+ RP +SG SS T+ Sbjct: 688 STSTHHVSTSSPAPRPGTTSQASGPGNSSTSTK 720
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 29.6 bits (65), Expect = 4.3 Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = -3 Query: 375 STTYHT-RTTSPSCRPSAAGSSSGQPTSSRGTRCSQRDRPGLTSRLS*TARAPVIPDDTS 199 STT T TTS S PS SS+ +SS T +Q TS S T+ A V TS Sbjct: 197 STTSTTSSTTSTSSSPSTTSSSTSASSSSE-TSSTQATSSSTTSTSSSTSTATV----TS 251 Query: 198 RPCDTDLASS 169 P T + +S Sbjct: 252 TPSSTSIGTS 261
>DBP_BOVIN (Q32PF6) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) Length = 325 Score = 29.6 bits (65), Expect = 4.3 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 12/75 (16%) Frame = -3 Query: 357 RTTSPSCRPSAAGSSSGQPTSSRGTRCSQR-------DRPGLTSRLS*TARAPVIPDD-- 205 RT +PS RP + GS+S P SS G ++ R GLTSR +PV PD Sbjct: 146 RTPAPSPRPGSCGSAS--PRSSPGHAPARAALGAAGGHRAGLTSR---DTPSPVDPDTVE 200 Query: 204 ---TSRPCDTDLASS 169 T P DLA S Sbjct: 201 VLMTFEPDPADLALS 215
>PEPC2_UROPA (Q9XFA2) Phosphoenolpyruvate carboxykinase [ATP] 2 (EC 4.1.1.49)| Length = 626 Score = 29.6 bits (65), Expect = 4.3 Identities = 21/58 (36%), Positives = 28/58 (48%) Frame = +2 Query: 143 THQRYNLSYDDAKSVSHGRDVSSGITGARAVHERRLVKPGRSRCEQRVPLEEVGWPEL 316 TH YNLS + + G+ SS IT A+ K GRS ++RV +E EL Sbjct: 104 THVLYNLSPAELYEQAFGQKKSSFITSTGALATLSGAKTGRSPRDKRVVKDETTSQEL 161
>ERG2_NEUCR (Q92254) C-8 sterol isomerase (Delta-8--delta-7 sterol isomerase)| Length = 256 Score = 29.6 bits (65), Expect = 4.3 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = -3 Query: 357 RTTSPSCRPSAAGSSSGQPTSSRGTRCSQRDR 262 +++S +PS +GSSSG+ +S RCS R R Sbjct: 6 QSSSGGNKPSGSGSSSGRSSSGSSCRCSCRCR 37
>IDGF1_DROME (Q8MM24) Chitinase-like protein Idgf1 precursor (Imaginal disk| growth factor protein 1) Length = 439 Score = 29.6 bits (65), Expect = 4.3 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Frame = +2 Query: 149 QRYNL---SYDDAKSVSHGRDVSSGITGARAVHERRLVKPGRSRCEQRVPLEEVGWPE-- 313 Q+ NL SY A +S G SG++GA VHE V PG + + L + WPE Sbjct: 287 QKLNLGIASYGRAWKLSKG----SGLSGAPIVHETCGVAPGGIQIQSAEGL--LSWPEIC 340 Query: 314 --LEPAADGRHDGEVVLVWYVVD 376 L A ++ GE+ + V D Sbjct: 341 SKLSQNASAQYRGELAPLRKVTD 363
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 29.3 bits (64), Expect = 5.6 Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 17/84 (20%) Frame = -3 Query: 363 HTRTTSPSCRPSAAGSSSGQPTSSR------GTRCSQRDRPGL----------TSRLS*T 232 H+ + P PSAA SSS P +SR G+R S P +S S + Sbjct: 3615 HSNDSPPP--PSAAPSSSASPHASRKSWPPVGSRASAAKPPSFPPLSSSSTVTSSSCSTS 3672 Query: 231 ARAPVIP-DDTSRPCDTDLASSYD 163 P +P DD S DTDL+ D Sbjct: 3673 GVQPSMPTDDYSEESDTDLSQKSD 3696
>IRF6_MOUSE (P97431) Interferon regulatory factor 6 (IRF-6)| Length = 467 Score = 29.3 bits (64), Expect = 5.6 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = -2 Query: 457 GDDGLVAWSEKNRAVRNEDIVLWYTVGIHHIPYQDDFPVM 338 G G W EK+ V ++ HH+P QD FP + Sbjct: 127 GSTGSAPWDEKDNDVDEDEEEDELEQSQHHVPIQDTFPFL 166
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 29.3 bits (64), Expect = 5.6 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 372 TTYHTRTTSPSCRPSAAGSSSGQPTSSRGTR 280 +T+H T+SP+ RP +SG SS T+ Sbjct: 711 STHHVSTSSPAPRPGTTSQASGPGNSSTSTK 741
>TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 458 Score = 29.3 bits (64), Expect = 5.6 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 3/90 (3%) Frame = +2 Query: 74 LQTVPKTTTSGYVEAPKHSVQQNTHQRYNLSYDDAKSVSHGRDVSSGITGARAVHERRLV 253 LQ T +G E+P + ++ + DAKS DV++ + RA E+ Sbjct: 31 LQDQEGDTDAGLKESPLQTPAEDGSEELGSETSDAKSTPTAEDVTAPLVDERAPGEQAAA 90 Query: 254 KPGRSRCEQRVPLEEVG---WPELEPAADG 334 +P + EE G P LE A G Sbjct: 91 QP-HMEIPEGTTAEEAGIGDTPSLEDEAAG 119
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 29.3 bits (64), Expect = 5.6 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Frame = -2 Query: 385 TVGIHHIPYQDDFPVMPTVSGGFELRPANFFERNSLLTTRPP----GLDQPPLVNC---- 230 T G+H +P Q FP P V GG P + T+ PP QPP Sbjct: 1014 TTGLHQVPSQSPFPQHPFVPGG----PPPITPPSCPPTSTPPAGPSSSSQPPCSAAVSSG 1069 Query: 229 -SCTGDPR*HVPAVRYR 182 S G P +PAV+ + Sbjct: 1070 GSVPGAPSCPLPAVQIK 1086
>RB3GP_CAEEL (Q93538) Rab3 GTPase-activating protein catalytic subunit (Rab3| GTPase-activating protein 1) Length = 915 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 4/72 (5%) Frame = +2 Query: 65 LDQLQTVPKTTTSG----YVEAPKHSVQQNTHQRYNLSYDDAKSVSHGRDVSSGITGARA 232 ++ LQ VP ++ +VEAPK ++++ H ++ ++ HG +V+ Sbjct: 69 IELLQPVPASSNPSNDVEFVEAPKDEIEEDAHVIPFTVAEEVANLKHGFEVTDSFLLKFG 128 Query: 233 VHERRLVKPGRS 268 + E ++ P S Sbjct: 129 IRECIIISPNDS 140
>AROC_RHOPA (Q6NAI4) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 362 Score = 28.9 bits (63), Expect = 7.3 Identities = 25/102 (24%), Positives = 41/102 (40%) Frame = +2 Query: 38 KIKRPLAACLDQLQTVPKTTTSGYVEAPKHSVQQNTHQRYNLSYDDAKSVSHGRDVSSGI 217 K+ LAA L + V + + + +QN + ++ A +H + GI Sbjct: 230 KLDGDLAAALMSINAVKGVEIGDGFASAELTGEQNADEMRTGNHGPAFLSNHAGGILGGI 289 Query: 218 TGARAVHERRLVKPGRSRCEQRVPLEEVGWPELEPAADGRHD 343 + + V R VKP S R ++ G + E GRHD Sbjct: 290 STGQPVVARFAVKPTSSILTPRKTVDRTG-HDTEILTKGRHD 330
>ZN516_MOUSE (Q7TSH3) Zinc finger protein 516| Length = 1157 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = -3 Query: 357 RTTSPSCRPSAAGSSSGQPTSSRGTRCSQRDRPGLTSRLS*TARAPVIPDDTS 199 R C + G S+ QP SS G+ C+ D PGL + + +P+ S Sbjct: 539 RAARARCGSLSEGDSASQP-SSPGSACAIADSPGLAEEVVDDSGEEAVPEPAS 590
>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) Length = 407 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -3 Query: 378 ASTTYHTRTTSPSCRPSAAGSSSGQPTSSRGTRCSQRDRPGLTSRLS 238 +STT TR T P+AA ++S P S G S P +LS Sbjct: 219 SSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQLS 265
>NYLC_FLASK (P07062) 6-aminohexanoate-dimer hydrolase (EC 3.5.1.46) (Nylon| oligomers degrading enzyme EII') Length = 392 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +3 Query: 246 GWSSPGGLVVSNEFLSKKLAGRSSNPPLTVGMTG---KSSWYGMWW 374 G +PGG VVS +++ + LAG S G T S+ WW Sbjct: 286 GGVAPGGRVVSEDWVRRVLAGGSHEAMTDKGFTNTFPDGSYTRQWW 331
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Frame = -3 Query: 474 TPTRAPAT-TAWSLXXXXXXXXXXXXXXXXXRWASTTYHTRTTSPSCRPSAAGSSSGQPT 298 +P+ +P T T S S+T T TT+PS + SSS P+ Sbjct: 452 SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPS 511 Query: 297 SSRGTRCS 274 S+ + S Sbjct: 512 STASSSVS 519
>CCNL1_RAT (Q9R1Q2) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)| Length = 527 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = -3 Query: 372 TTYHTRTTSPSCRPSAAGSSSGQPTSSRGTRCSQRDRPGLTSRLS*TARAPVIPDDTSRP 193 T+ ++ S PSA GSSSG T++ T L S +S T VIP++ P Sbjct: 8 TSTAAAASASSAAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSVIPEERLSP 67
>PSAB_MAIZE (P04967) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 735 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG + P + S + G +N L G Sbjct: 95 HFGQPAVEAFTRGGAAGPVNIAYSGVYQWWYTIGLRTNEDLYTG 138
>PEPC1_UROPA (P49292) Phosphoenolpyruvate carboxykinase [ATP] 1 (EC 4.1.1.49)| Length = 624 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +2 Query: 143 THQRYNLSYDDAKSVSHGRDVSSGITGARAVHERRLVKPGRSRCEQRVPLEEVGWPEL 316 TH YNLS + + G+ SS IT A+ K GRS ++RV ++ EL Sbjct: 102 THVLYNLSPAELYEQAFGQKKSSFITSTGALATLSGAKTGRSPRDKRVVKDDTTAQEL 159
>TRPG_DROME (Q9VJJ7) Transient receptor potential-gamma protein (TRPgamma)| Length = 1128 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +3 Query: 306 GRSSNPPLTVGMTGKSSWYGMWWMPTVYHNTMSSFR 413 G + PP + T KS WY + WM V+ + S+ R Sbjct: 682 GGTCPPPFNIIPTPKSIWYAIKWMRRVFCSGSSAAR 717
>A85A_MYCTU (P0A4V2) Antigen 85-A precursor (85A) (Antigen 85 complex A)| (Ag85A) (Mycolyl transferase 85A) (EC 2.3.1.-) (Fibronectin-binding protein A) Length = 338 Score = 28.5 bits (62), Expect = 9.6 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 17/123 (13%) Frame = +3 Query: 141 THTNVTICRMMMPNLYRTAGTCHLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSN 320 T T R +P Y + +G + QF GG +SP ++ +G N Sbjct: 38 TATAGAFSRPGLPVEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDIN 97 Query: 321 PP-----------LTVGMTGKSSWYGMWWMPTVYHNTMSSFRTALFFS------LQATRP 449 P + + + G+SS+Y W+ P +++ F + LQA R Sbjct: 98 TPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRH 157 Query: 450 SSP 458 P Sbjct: 158 VKP 160
>A85A_MYCBO (P0A4V3) Antigen 85-A precursor (85A) (Antigen 85 complex A)| (Ag85A) (Mycolyl transferase 85A) (EC 2.3.1.-) (Fibronectin-binding protein A) Length = 338 Score = 28.5 bits (62), Expect = 9.6 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 17/123 (13%) Frame = +3 Query: 141 THTNVTICRMMMPNLYRTAGTCHLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSN 320 T T R +P Y + +G + QF GG +SP ++ +G N Sbjct: 38 TATAGAFSRPGLPVEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDIN 97 Query: 321 PP-----------LTVGMTGKSSWYGMWWMPTVYHNTMSSFRTALFFS------LQATRP 449 P + + + G+SS+Y W+ P +++ F + LQA R Sbjct: 98 TPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRH 157 Query: 450 SSP 458 P Sbjct: 158 VKP 160
>PSAB_WHEAT (P58386) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG + P + S + G +N L G Sbjct: 95 HFGQPAVEAFTRGGAAGPVNIAYSGVYQWWYTIGLRTNEDLYTG 138
>PSAB_SACOF (Q6ENW4) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG + P + S + G +N L G Sbjct: 95 HFGQPAVEAFTRGGAAGPVNIAYSGVYQWWYTIGLRTNEDLYTG 138
>PSAB_SACHY (Q6L399) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG + P + S + G +N L G Sbjct: 95 HFGQPAVEAFTRGGAAGPVNIAYSGVYQWWYTIGLRTNEDLYTG 138
>PSAB_PSINU (P58765) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E +TRGG S P + S + G +N L G Sbjct: 95 HFGQPAVEAYTRGGASGPVNIAYSGVYQWWYTIGLRTNQDLYTG 138
>PSAB_PHYPA (Q8MFA2) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG S P + S + G +N L G Sbjct: 95 HFGQPAVEAFTRGGASGPVNIAYSGVYQWWYTIGLRTNQDLYGG 138
>PSAB_ORYSA (P12156) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG + P + S + G +N L G Sbjct: 95 HFGQPAVEAFTRGGAAGPVNIAYSGVYQWWYTIGLRTNEDLYTG 138
>PSAB_ORYNI (Q6ENH5) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG + P + S + G +N L G Sbjct: 95 HFGQPAVEAFTRGGAAGPVNIAYSGVYQWWYTIGLRTNEDLYTG 138
>PSAB_MARPO (P06408) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = +3 Query: 207 HLGSPVHEQFTRGGWSSPGGLVVSNEFLSKKLAGRSSNPPLTVG 338 H G P E FTRGG S P + S + G +N L G Sbjct: 95 HFGQPAVEAFTRGGASGPVNIAYSGVYQWWYTIGLRTNQDLYNG 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,649,390 Number of Sequences: 219361 Number of extensions: 1658478 Number of successful extensions: 6142 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 5709 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6108 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
