>ref|XM_478783.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2097

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                        
Query: 284  gttcctctcgaagaagttggctggccggagctcgaacccgccgctgacggtcggcatgac 343
            ||||||||||||||||||||  ||||||||||||| ||||||||| |  |||||||| ||
Sbjct: 2013 gttcctctcgaagaagttggacggccggagctcgagcccgccgctcagcgtcggcatcac 1954

                                                                        
Query: 344  ggggaagtcgtcctggtatggtatgtggtggatgcccaccgtgtaccacaatacgatgtc 403
             |||||||| |||||||| || | |||||| |  ||||||||||||||||  ||||||||
Sbjct: 1953 cgggaagtcctcctggtacggcacgtggtgcagccccaccgtgtaccacagcacgatgtc 1894

                                                                        
Query: 404  ctcgttccggaccgccctgttcttctcgctccaagcgaccaggccgtcgtcgccggtgct 463
            ||||   |||| |||||||| |  ||||||||| ||  | ||||||||| ||||||||||
Sbjct: 1893 ctcgccgcggatcgccctgtcccgctcgctccacgcagcgaggccgtcgccgccggtgct 1834

                            
Query: 464  ctggtcggcgtacagc 479
            ||||||||||||||||
Sbjct: 1833 ctggtcggcgtacagc 1818

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                            
Query: 284      gttcctctcgaagaagttggctggccggagctcgaacccgccgctgacggtcggcatgac 343
                ||||||||||||||||||||  ||||||||||||| ||||||||| |  |||||||| ||
Sbjct: 23046508 gttcctctcgaagaagttggacggccggagctcgagcccgccgctcagcgtcggcatcac 23046449

                                                                            
Query: 344      ggggaagtcgtcctggtatggtatgtggtggatgcccaccgtgtaccacaatacgatgtc 403
                 |||||||| |||||||| || | |||||| |  ||||||||||||||||  ||||||||
Sbjct: 23046448 cgggaagtcctcctggtacggcacgtggtgcagccccaccgtgtaccacagcacgatgtc 23046389

                                                                            
Query: 404      ctcgttccggaccgccctgttcttctcgctccaagcgaccaggccgtcgtcgccggtgct 463
                ||||   |||| |||||||| |  ||||||||| ||  | ||||||||| ||||||||||
Sbjct: 23046388 ctcgccgcggatcgccctgtcccgctcgctccacgcagcgaggccgtcgccgccggtgct 23046329

                                
Query: 464      ctggtcggcgtacagc 479
                ||||||||||||||||
Sbjct: 23046328 ctggtcggcgtacagc 23046313

>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                          
Query: 284    gttcctctcgaagaagttggctggccggagctcgaacccgccgctgacggtcggcatgac 343
              ||||||||||||||||||||  ||||||||||||| ||||||||| |  |||||||| ||
Sbjct: 121722 gttcctctcgaagaagttggacggccggagctcgagcccgccgctcagcgtcggcatcac 121663

                                                                          
Query: 344    ggggaagtcgtcctggtatggtatgtggtggatgcccaccgtgtaccacaatacgatgtc 403
               |||||||| |||||||| || | |||||| |  ||||||||||||||||  ||||||||
Sbjct: 121662 cgggaagtcctcctggtacggcacgtggtgcagccccaccgtgtaccacagcacgatgtc 121603

                                                                          
Query: 404    ctcgttccggaccgccctgttcttctcgctccaagcgaccaggccgtcgtcgccggtgct 463
              ||||   |||| |||||||| |  ||||||||| ||  | ||||||||| ||||||||||
Sbjct: 121602 ctcgccgcggatcgccctgtcccgctcgctccacgcagcgaggccgtcgccgccggtgct 121543

                              
Query: 464    ctggtcggcgtacagc 479
              ||||||||||||||||
Sbjct: 121542 ctggtcggcgtacagc 121527

>dbj|AK099435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013014O02, full
            insert sequence
          Length = 1715

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                        
Query: 284  gttcctctcgaagaagttggctggccggagctcgaacccgccgctgacggtcggcatgac 343
            ||||||||||||||||||||  ||||||||||||| ||||||||| |  |||||||| ||
Sbjct: 1353 gttcctctcgaagaagttggacggccggagctcgagcccgccgctcagcgtcggcatcac 1294

                                                                        
Query: 344  ggggaagtcgtcctggtatggtatgtggtggatgcccaccgtgtaccacaatacgatgtc 403
             |||||||| |||||||| || | |||||| |  ||||||||||||||||  ||||||||
Sbjct: 1293 cgggaagtcctcctggtacggcacgtggtgcagccccaccgtgtaccacagcacgatgtc 1234

                                                                        
Query: 404  ctcgttccggaccgccctgttcttctcgctccaagcgaccaggccgtcgtcgccggtgct 463
            ||||   |||| |||||||| |  ||||||||| ||  | ||||||||| ||||||||||
Sbjct: 1233 ctcgccgcggatcgccctgtcccgctcgctccacgcagcgaggccgtcgccgccggtgct 1174

                            
Query: 464  ctggtcggcgtacagc 479
            ||||||||||||||||
Sbjct: 1173 ctggtcggcgtacagc 1158

>gb|AY108284.1| Zea mays PCO126744 mRNA sequence
          Length = 425

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 330 acggtcggcatgacggggaagtcgtcctggtatggtatgtggtggatgcccaccgtgtac 389
           ||||| ||||||| ||||||||| |||||| | || ||||||||||  |||| |||||||
Sbjct: 162 acggtgggcatgatggggaagtcctcctggcacgggatgtggtggaaccccagcgtgtac 103

               
Query: 390 caca 393
           ||||
Sbjct: 102 caca 99

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                            
Query: 284      gttcctctcgaagaagttggctggccggagctcgaacccgccgctgacggtcggcatgac 343
                |||||||||||||||||||| ||| |||| ||| ||  | |||||||  || ||||| ||
Sbjct: 13327654 gttcctctcgaagaagttggatggacggacctctaatgcaccgctgatagttggcatcac 13327595

                                  
Query: 344      ggggaagtcgtcctggta 361
                 |||||||| ||||||||
Sbjct: 13327594 tgggaagtcctcctggta 13327577



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 288      ctctcgaagaagttggctggccggagctcgaa 319
                ||||| |||||||||  |||||||||||||||
Sbjct: 13344304 ctctcaaagaagttgaatggccggagctcgaa 13344273

>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0427E01
          Length = 146395

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                         
Query: 284   gttcctctcgaagaagttggctggccggagctcgaacccgccgctgacggtcggcatgac 343
             |||||||||||||||||||| ||| |||| ||| ||  | |||||||  || ||||| ||
Sbjct: 89464 gttcctctcgaagaagttggatggacggacctctaatgcaccgctgatagttggcatcac 89405

                               
Query: 344   ggggaagtcgtcctggta 361
              |||||||| ||||||||
Sbjct: 89404 tgggaagtcctcctggta 89387



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 288    ctctcgaagaagttggctggccggagctcgaa 319
              ||||| |||||||||  |||||||||||||||
Sbjct: 106114 ctctcaaagaagttgaatggccggagctcgaa 106083

>dbj|AK067262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095P11, full
            insert sequence
          Length = 2329

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 284  gttcctctcgaagaagttggctggccggagctcgaacccgccgctgacggtcggcatgac 343
            |||||||||||||||||||| ||| |||| ||| ||  | |||||||  || ||||| ||
Sbjct: 2135 gttcctctcgaagaagttggatggacggacctctaatgcaccgctgatagttggcatcac 2076

                              
Query: 344  ggggaagtcgtcctggta 361
             |||||||| ||||||||
Sbjct: 2075 tgggaagtcctcctggta 2058

>ref|XM_847939.1| PREDICTED: Canis familiaris similar to melanoma antigen family A,
           10 (LOC610431), mRNA
          Length = 627

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 339 atgacggggaagtcgtcctggtat 362
           ||||||||||||||||||||||||
Sbjct: 296 atgacggggaagtcgtcctggtat 273

>ref|XM_850088.1| PREDICTED: Canis familiaris similar to melanoma antigen family A,
           10 (LOC612356), mRNA
          Length = 936

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 339 atgacggggaagtcgtcctggtat 362
           ||||||||||||||||||||||||
Sbjct: 494 atgacggggaagtcgtcctggtat 471

>ref|XM_549347.2| PREDICTED: Canis familiaris similar to melanoma antigen family A,
           10 (LOC492227), mRNA
          Length = 1395

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 339 atgacggggaagtcgtcctgg 359
           |||||||||||||||||||||
Sbjct: 911 atgacggggaagtcgtcctgg 891

>gb|AC021064.20| Homo sapiens 3 BAC RP11-49A15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 162895

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 25   taatgaatgatagaaaataaa 45
            |||||||||||||||||||||
Sbjct: 5411 taatgaatgatagaaaataaa 5431

>ref|XM_847925.1| PREDICTED: Canis familiaris similar to melanoma antigen family A,
           10 (LOC610420), mRNA
          Length = 768

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 cggggaagtcgtcctggtat 362
           ||||||||||||||||||||
Sbjct: 304 cggggaagtcgtcctggtat 285

>ref|XM_850055.1| PREDICTED: Canis familiaris similar to melanoma antigen family A,
           10 (LOC612312), mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 cggggaagtcgtcctggtat 362
           ||||||||||||||||||||
Sbjct: 613 cggggaagtcgtcctggtat 594

>ref|XM_850048.1| PREDICTED: Canis familiaris similar to melanoma antigen family A,
           10 (LOC492199), mRNA
          Length = 1452

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 cggggaagtcgtcctggtat 362
           ||||||||||||||||||||
Sbjct: 571 cggggaagtcgtcctggtat 552

>ref|XM_549315.2| PREDICTED: Canis familiaris similar to melanoma antigen family A,
           10 (LOC492195), mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 cggggaagtcgtcctggtat 362
           ||||||||||||||||||||
Sbjct: 304 cggggaagtcgtcctggtat 285

>emb|CR628341.13| Zebrafish DNA sequence from clone DKEY-29G22 in linkage group 6,
             complete sequence
          Length = 246165

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    attaatgaatgatagaaaat 42
             ||||||||||||||||||||
Sbjct: 23892 attaatgaatgatagaaaat 23873

>emb|CR932532.1|CNS0KY9W Paramecium tetraurelia, Small GTPase rac, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  atatgtagaagcaccaaaac 125
            ||||||||||||||||||||
Sbjct: 1301 atatgtagaagcaccaaaac 1320

>emb|Z98046.1|HS14O9 Human DNA sequence from clone RP1-14O9 on chromosome Xp11.1-11.4,
             complete sequence
          Length = 77781

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   agaagcaccaaaacattcag 131
             ||||||||||||||||||||
Sbjct: 59089 agaagcaccaaaacattcag 59070

>emb|CR513789.22| Zebrafish DNA sequence from clone CH211-212J20 in linkage group 22,
              complete sequence
          Length = 193420

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     attaatgaatgatagaaaataaaa 46
              |||||||||||||| |||||||||
Sbjct: 181912 attaatgaatgatacaaaataaaa 181935

>gb|AC093323.3| Homo sapiens BAC clone RP11-539L10 from 4, complete sequence
          Length = 195576

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 92    accaccacatcaggatatgtagaagcac 119
             ||||||||| ||||| ||||||||||||
Sbjct: 82310 accaccacaccaggagatgtagaagcac 82337

>dbj|AK091003.1| Homo sapiens cDNA FLJ33684 fis, clone BRAWH2002630, highly similar to
            Human hepatocellular carcinoma associated protein (JCL-1)
            mRNA
          Length = 2476

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  agaagcaccaaaacattcag 131
            ||||||||||||||||||||
Sbjct: 1349 agaagcaccaaaacattcag 1330

>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OJ1294_G12
          Length = 121979

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 288  ctctcgaagaagttggctggccggagctcgaa 319
            ||||| |||||||||  |||||||||||||||
Sbjct: 5736 ctctcaaagaagttgaatggccggagctcgaa 5705

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 457     cggtgctctggtcggcgtac 476
               ||||||||||||||||||||
Sbjct: 3201555 cggtgctctggtcggcgtac 3201536


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,230,950
Number of Sequences: 3902068
Number of extensions: 3230950
Number of successful extensions: 67503
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67366
Number of HSP's gapped (non-prelim): 137
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)