>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)|
          Length = 320

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
 Frame = +2

Query: 278 QLP-AGGGQVKSRPPKSSHAPAGVSAPSQPP------DGAASLS*RWSVAGGAVHGNPPS 436
           QLP AGGG+    PP S +AP     P+ P        GAA  +  +   GGA  G PP 
Sbjct: 59  QLPHAGGGR---EPPASYYAPRTAREPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQ 115

Query: 437 P 439
           P
Sbjct: 116 P 116

>V33P_ADE41 (P19416) 33 kDa phosphoprotein|
          Length = 217

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 278 QLPAGGGQVKSRPPKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGNPPSP 439
           ++ A      S+ P  S  P G   PS P  G    S RW     ++ G+PP+P
Sbjct: 67  EIIASAAAPSSKEPARSQPPTGKVGPSPPRPGLLKASRRWDTV--SIAGSPPAP 118

>OMP19_RHILO (Q98EC1) Outer membrane lipoprotein omp19 homolog precursor|
          Length = 179

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 19/60 (31%), Positives = 23/60 (38%)
 Frame = +2

Query: 200 TSHEAAMIKQEPRTXXXXXXXXXXXGQLPAGGGQVKSRPPKSSHAPAGVSAPSQPPDGAA 379
           TS  ++M  Q+P              QLP       + P K   APA     S PPDG A
Sbjct: 23  TSRFSSMDDQQPAPLQPAPAGQVTSNQLPPPASPGSTDPSKFPTAPANTQVASLPPDGQA 82

>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +2

Query: 317  PKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGNPPSP 439
            P +S  PAG S+ SQPP  AA  S      GG+V G P  P
Sbjct: 1045 PPTSTPPAGPSSSSQPPCSAAVSS------GGSVPGAPSCP 1079

>KLF14_HUMAN (Q8TD94) Krueppel-like factor 14 (Transcription factor BTEB5)|
           (Basic transcription element-binding protein 5)
           (BTE-binding protein 5)
          Length = 323

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 22/55 (40%), Positives = 28/55 (50%)
 Frame = +2

Query: 284 PAGGGQVKSRPPKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGNPPSPRSN 448
           PA G      P  SS APA  SAP+ P   AAS       +GGA+ G  P+P ++
Sbjct: 131 PASGAAAVCAPESSSDAPAVPSAPAAPGAPAAS----GGFSGGAL-GAGPAPAAD 180

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = +2

Query: 275 GQLPAGGGQVKSRPPKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGNPPSP 439
           G LP+ G     RPP  SH  A  S    PP G    S R   +  + HG+PP P
Sbjct: 132 GHLPSHG----QRPPSPSHGHAPPSGGHTPPRGQHPPSHR-RPSPPSRHGHPPPP 181

>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/56 (32%), Positives = 21/56 (37%)
 Frame = +2

Query: 275  GQLPAGGGQVKSRPPKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGNPPSPR 442
            G  P  GG    R P+      G  A S+ P        RW  +G  V   PP PR
Sbjct: 2350 GDRPPTGGHSSGRSPRMERRVPG-PARSESPRACRHGGARWPASGPHVSEGPPGPR 2404

>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/41 (46%), Positives = 21/41 (51%)
 Frame = +2

Query: 317  PKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGNPPSP 439
            P +S  PAG S+ SQPP  AA  S      GG V G P  P
Sbjct: 1045 PPTSTPPAGPSSSSQPPCSAAVSS------GGNVPGAPSCP 1079

>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
          Length = 646

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 314 PPKSSHAPAGVSAPSQPPDGAASL---S*RWSVAGGAVHGNPPSP 439
           PP S  +  G S P  PPD  ASL      ++ AGGA    PP P
Sbjct: 548 PPPSFVSHGGESLPPPPPDPVASLPPPPPAFTSAGGAPPPPPPPP 592

>BIND_LYTVA (P23117) Bindin precursor|
          Length = 462

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 284 PAGGGQVKSRPPKSSHAPAGVSAP 355
           P GGG    +PP+ ++AP G+  P
Sbjct: 257 PMGGGNYPGQPPQQNYAPQGMGGP 280

>TLL1_HUMAN (O43897) Tolloid-like protein 1 precursor (EC 3.4.24.-)|
          Length = 1013

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 341 PPARGTTWAASTSPGHRLPATDQRHHVSQHVAGAFE 234
           P  +  TW  S +PGHR+        + QH   A++
Sbjct: 795 PSRKECTWEISATPGHRIKLAFSEFEIEQHQECAYD 830

>34KD_MYCPA (Q04959) 34 kDa antigenic protein|
          Length = 298

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = +2

Query: 275 GQLPAGGGQVKSRPPKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGN 427
           G  P GG   +  P       A    PS PP G  S S   +V GG+  G+
Sbjct: 220 GGAPTGGFGAQPSPQSGPQQSAQQQGPSTPPTGFPSFSPPPNVGGGSDSGS 270

>TLL1_XENLA (Q8JI28) Tolloid-like protein 1 precursor (EC 3.4.24.-) (Xenopus|
           tolloid-like protein 1) (Metalloprotease xolloid-like)
           (Xlr)
          Length = 1007

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 341 PPARGTTWAASTSPGHRLPATDQRHHVSQHVAGAFE 234
           P  +  TW  S +PGHR+  +     + QH   A++
Sbjct: 790 PSRKECTWEISATPGHRVKLSFSEFEIEQHQECAYD 825

>NAS39_CAEEL (Q20176) Zinc metalloproteinase nas-39 precursor (EC 3.4.24.21)|
           (Nematode astacin 39)
          Length = 951

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 341 PPARGTTWAASTSPGHRLPATDQRHHVSQHVAGAFEA 231
           P  +  +W   T+PGHRL  T     V +H    ++A
Sbjct: 713 PKGQNCSWHFVTTPGHRLMLTFSSFQVEEHAQCKYDA 749

>TLL1_MOUSE (Q62381) Tolloid-like protein 1 precursor (EC 3.4.24.-) (mTll)|
          Length = 1013

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 341 PPARGTTWAASTSPGHRLPATDQRHHVSQHVAGAFE 234
           P  +  TW  S  PGHR+        V QH   A++
Sbjct: 795 PSRKECTWVISAIPGHRITLAFNEFEVEQHQECAYD 830

>TLL2_HUMAN (Q9Y6L7) Tolloid-like protein 2 precursor (EC 3.4.24.-)|
          Length = 1015

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 341 PPARGTTWAASTSPGHRLPATDQRHHVSQHVAGAFE 234
           P  R  TW  S++ GHR+  T     + QH   A++
Sbjct: 797 PSRRECTWNISSTAGHRVKLTFNEFEIEQHQECAYD 832

>VP40_HHV11 (P10210) Capsid protein P40 (Virion structural protein UL26)|
           [Contains: Capsid protein VP24 (EC 3.4.21.97)
           (Assemblin) (Protease); Capsid protein VP22A; UL26.5
           protein; C-terminal peptide]
          Length = 635

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 314 PPKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGNPPSP 439
           PP++ + P   SAP  PP G AS +     A  A    PP P
Sbjct: 530 PPEAVYRPPPHSAPYGPPQGPASHAPTPPYAPAACPPGPPPP 571

>CD2A2_HUMAN (Q8N726) Cyclin-dependent kinase inhibitor 2A, isoform 4 (p14ARF)|
           (p19ARF)
          Length = 173

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = +3

Query: 351 PHHSHPTAPRACRRGGPWPAVPSTGIRRARGR 446
           P HSHPT  R C  G P  A  +   R A GR
Sbjct: 130 PRHSHPTRARRCPGGLPGHAGGAAPGRGAAGR 161

>M4K2_MOUSE (Q61161) Mitogen-activated protein kinase kinase kinase kinase 2|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 2) (MEK
           kinase kinase 2) (MEKKK 2) (Germinal center kinase)
           (GCK) (Rab8-interacting protein)
          Length = 821

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +2

Query: 287 AGGGQVKSRPPKSSHAPAGVSAPSQPPDGAASLS*RWSVAGGAVHGNPPSPRSNCG 454
           +G       P   S  PAG  +P+  P   A+L  +      + HG PP+P+ + G
Sbjct: 417 SGDNAQSCSPGTLSAPPAGPGSPALLPTAWATLKQQEDRERSSCHGLPPTPKVHMG 472


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,217,441
Number of Sequences: 219361
Number of extensions: 1356322
Number of successful extensions: 4702
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4663
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)