ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart43f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASNS_MAIZE (P49094) Asparagine synthetase [glutamine-hydrolyzing... 84 2e-16
2ASNS_ASPOF (P31752) Asparagine synthetase [glutamine-hydrolyzing... 54 3e-07
3ASNS1_PEA (P19251) Asparagine synthetase, nodule [glutamine-hydr... 52 7e-07
4ASNS_ORYSA (Q43011) Asparagine synthetase [glutamine-hydrolyzing... 51 1e-06
5ASNS2_PEA (P19252) Asparagine synthetase, root [glutamine-hydrol... 51 2e-06
6ASNS1_LOTJA (P49092) Asparagine synthetase [glutamine-hydrolyzin... 50 3e-06
7ASNS_TRIVS (O24661) Asparagine synthetase [glutamine-hydrolyzing... 50 3e-06
8ASNB_ECOLI (P22106) Asparagine synthetase B [glutamine-hydrolyzi... 49 6e-06
9ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing... 48 1e-05
10ASNS_BRAOL (P49091) Asparagine synthetase [glutamine-hydrolyzing... 48 1e-05
11ASNS2_LOTJA (P49093) Asparagine synthetase [glutamine-hydrolyzin... 48 1e-05
12JARD2_HUMAN (Q92833) Jumonji protein (Jumonji/ARID domain-contai... 30 2.7
13CJ095_HUMAN (Q9H7T3) Protein C10orf95 30 3.6
14QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin) 29 6.1
15FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related ... 29 6.1
16HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated c... 29 6.1
17NBEAL_HUMAN (Q6ZS30) Neurobeachin-like 1 (Amyotrophic lateral sc... 29 6.1
18KCC2B_HUMAN (Q13554) Calcium/calmodulin-dependent protein kinase... 29 7.9

>ASNS_MAIZE (P49094) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)|
           (Glutamine-dependent asparagine synthetase)
          Length = 585

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGRLIASHN 373
           SARETVPWGPSIACSTPAAIEWV QWKASNDPSGR I+SH+
Sbjct: 509 SARETVPWGPSIACSTPAAIEWVEQWKASNDPSGRFISSHD 549



to top

>ASNS_ASPOF (P31752) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)|
           (AS)
          Length = 589

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGRLIASHND 370
           SAR TVP GPSIACST  AIEW A+W  + DPSGR     +D
Sbjct: 509 SARFTVPGGPSIACSTAKAIEWDARWSNNLDPSGRAALGVHD 550



to top

>ASNS1_PEA (P19251) Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC|
           6.3.5.4) (Glutamine-dependent asparagine synthetase)
          Length = 585

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 24/35 (68%), Positives = 26/35 (74%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGR 391
           SAR TVP GPS+ACST  AIEW A W  + DPSGR
Sbjct: 510 SARLTVPGGPSVACSTEKAIEWDASWSNNLDPSGR 544



to top

>ASNS_ORYSA (Q43011) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)|
           (Glutamine-dependent asparagine synthetase)
          Length = 590

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 23/42 (54%), Positives = 28/42 (66%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGRLIASHND 370
           +AR TVP GPS+ACST  A+EW A W  + DPSGR     +D
Sbjct: 509 AARLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHD 550



to top

>ASNS2_PEA (P19252) Asparagine synthetase, root [glutamine-hydrolyzing] (EC|
           6.3.5.4) (Glutamine-dependent asparagine synthetase)
          Length = 582

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 23/42 (54%), Positives = 28/42 (66%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGRLIASHND 370
           SAR TVP GP++ACST  A+EW A W  + DPSGR     +D
Sbjct: 509 SARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHD 550



to top

>ASNS1_LOTJA (P49092) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC|
           6.3.5.4) (Glutamine-dependent asparagine synthetase 1)
          Length = 585

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 22/35 (62%), Positives = 26/35 (74%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGR 391
           SAR TVP GP++ACST  A+EW A W  + DPSGR
Sbjct: 509 SARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGR 543



to top

>ASNS_TRIVS (O24661) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)|
           (Glutamine-dependent asparagine synthetase)
          Length = 585

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 22/42 (52%), Positives = 27/42 (64%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGRLIASHND 370
           SA+ TVP GPS+ACST  A+ W A W  + DPSGR     +D
Sbjct: 509 SAKLTVPGGPSVACSTATAVAWDASWSKNLDPSGRAATGVHD 550



to top

>ASNB_ECOLI (P22106) Asparagine synthetase B [glutamine-hydrolyzing] (EC|
           6.3.5.4)
          Length = 553

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 22/40 (55%), Positives = 27/40 (67%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGRLIASH 376
           SA E VP GPS+ACS+  AIEW   +K  +DPSGR +  H
Sbjct: 509 SAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVH 548



to top

>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)|
           (Glutamine-dependent asparagine synthetase)
          Length = 583

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGR 391
           SAR TVP G ++ACST  A+EW A W  + DPSGR
Sbjct: 509 SARLTVPGGATVACSTAKAVEWDASWSNNMDPSGR 543



to top

>ASNS_BRAOL (P49091) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)|
           (Glutamine-dependent asparagine synthetase)
          Length = 585

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGR 391
           SAR TVP G ++ACST  A+EW A W  + DPSGR
Sbjct: 510 SARLTVPGGATVACSTAKAVEWDASWSNNMDPSGR 544



to top

>ASNS2_LOTJA (P49093) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC|
           6.3.5.4) (Glutamine-dependent asparagine synthetase 2)
          Length = 585

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 24/42 (57%), Positives = 27/42 (64%)
 Frame = -3

Query: 495 SARETVPWGPSIACSTPAAIEWVAQWKASNDPSGRLIASHND 370
           SAR +VP G SIACST  AIEW A W  + DPSGR     +D
Sbjct: 509 SARLSVPGGASIACSTEKAIEWDAAWSNNLDPSGRAALGVHD 550



to top

>JARD2_HUMAN (Q92833) Jumonji protein (Jumonji/ARID domain-containing protein 2)|
          Length = 1246

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = +3

Query: 147 PAAAPMAYGSSVRGHAHTHTHPP 215
           PAAAP   GSS +G A TH HPP
Sbjct: 270 PAAAPST-GSSAKGLAATHHHPP 291



to top

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 417 STGPPTRWPPACCTRCSDPTAPSPSP 494
           S  P   WPP CC   S PTA +  P
Sbjct: 65  SCSPAPTWPPLCCYPQSRPTASAAGP 90



to top

>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)|
          Length = 387

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 189 HAHTHTHPPRPNQLARAATASTGPE 263
           H H H HPP P Q  RAA A    E
Sbjct: 48  HHHHHHHPPPPQQPQRAAAAEEEDE 72



to top

>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
           (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1)
          Length = 451

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 189 HAHTHTHPPRPNQLARAATASTGPE 263
           H H H HPP P Q  RAA A    E
Sbjct: 48  HHHHHHHPPPPQQPQRAAAAEEEDE 72



to top

>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2
          Length = 863

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 414 PSTGPPTRWPPACCTRCSDPTAPSPSPT 497
           P+ GPP   PP    +   P AP P+PT
Sbjct: 18  PAPGPPPPPPPPAPLQLQPPPAPPPNPT 45



to top

>NBEAL_HUMAN (Q6ZS30) Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2|
           chromosomal region candidate gene 17 protein)
          Length = 1314

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +2

Query: 377 WEAMSRPEGSLEAFHWATH-SMAAGVLHAML 466
           +E    P G+++ FH+ TH S +AGV+H ++
Sbjct: 790 YENFEDPMGTIDKFHYGTHYSNSAGVMHYLI 820



to top

>KCC2B_HUMAN (Q13554) Calcium/calmodulin-dependent protein kinase type II beta|
           chain (EC 2.7.11.17) (CaM-kinase II beta chain) (CaM
           kinase II beta subunit) (CaMK-II beta subunit)
          Length = 664

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +3

Query: 414 PSTGPPTRWPPACCTRCSDPTAPSPSPT 497
           P    P +WPP     C  PT P P PT
Sbjct: 506 PEAEAPRQWPPP----CPSPTIPGPLPT 529


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,924,669
Number of Sequences: 219361
Number of extensions: 648753
Number of successful extensions: 3151
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3133
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top