ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart43f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF488771.1| Bromus tectorum acetolactate synthase (ALS) mRNA,... 157 1e-35
2gb|AF487459.1| Bromus tectorum acetolactate synthase (ALS) mRNA,... 157 1e-35
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
4dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
5dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
6gb|AY885675.1| Oryza sativa acetolactate synthase gene, complete... 68 1e-08
7gb|AY885674.1| Oryza sativa (japonica cultivar-group) acetolacta... 68 1e-08
8gb|AY885673.1| Oryza sativa acetolactate synthase gene, complete... 68 1e-08
9dbj|AB049823.1| Oryza sativa ALS mRNA for acetolactate synthase,... 68 1e-08
10dbj|AB049822.1| Oryza sativa ALS mRNA for acetolactate synthase,... 68 1e-08
11gb|AC103630.10| Mus musculus chromosome 6, clone RP24-358D8, com... 42 0.54
12gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosom... 40 2.2
13emb|CR385021.12| Zebrafish DNA sequence from clone CH211-200N15 ... 40 2.2
14gb|AC008942.6| Homo sapiens chromosome 5 clone CTD-2320O4, compl... 40 2.2
15emb|BX813336.4| Mouse DNA sequence from clone RP23-207B5 on chro... 40 2.2
16dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
17gb|AC098934.3| Homo sapiens chromosome 1 clone RP11-480I12, comp... 40 2.2
18emb|CR812466.18| Zebrafish DNA sequence from clone CH211-269M1 i... 40 2.2
19gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.2
20emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb... 40 2.2
21emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb... 40 2.2
22gb|AC133940.4| Mus musculus BAC clone RP23-433D1 from 16, comple... 40 2.2
23emb|AL731871.12| Mouse DNA sequence from clone RP23-111J19 on ch... 40 2.2
24emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 38 8.5
25ref|XM_720400.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 38 8.5
26gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, com... 38 8.5
27emb|AL359956.10| Human DNA sequence from clone RP11-438H17 on ch... 38 8.5
28emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4,... 38 8.5
29gb|AC116914.5| Homo sapiens chromosome 17, clone CTD-3195I5, com... 38 8.5
30gb|AC015528.14| Homo sapiens chromosome 8, clone RP11-179A23, co... 38 8.5
31gb|AC118269.6| Homo sapiens chromosome 17, clone CTD-2383D6, com... 38 8.5
32gb|AC105917.5| Homo sapiens BAC clone RP11-395C17 from 4, comple... 38 8.5
33gb|AC093811.3| Homo sapiens BAC clone RP11-355H11 from 4, comple... 38 8.5
34gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, comp... 38 8.5
35gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosom... 38 8.5
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.5
37gb|AC025674.10| Homo sapiens chromosome 8, clone RP11-513O17, co... 38 8.5
38gb|AC131005.3| Homo sapiens 3 BAC RP11-88K11 (Roswell Park Cance... 38 8.5
39emb|AL929152.24| Zebrafish DNA sequence from clone CH211-59L24, ... 38 8.5
40gb|AF168787.1|AF168787 Homo sapiens vanilloid receptor gene, par... 38 8.5
41gb|AC156495.1| Oryza sativa (japonica cultivar-group) BAC clone ... 38 8.5
42gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 38 8.5
43emb|CT030248.6| Mouse DNA sequence from clone RP24-328G14 on chr... 38 8.5
44emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chro... 38 8.5
45emb|AL132827.2|CNS01DTP Human chromosome 14 DNA sequence BAC C-2... 38 8.5
46gb|AC127389.2| Homo sapiens BAC clone RP11-142N15 from UL, compl... 38 8.5 
>gb|AF488771.1| Bromus tectorum acetolactate synthase (ALS) mRNA, partial cds
          Length = 2002

 Score =  157 bits (79), Expect = 1e-35
 Identities = 120/131 (91%), Gaps = 2/131 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    attccatggaagtacttattattgatatgtaggacaagaaacttgcatgacatcttatga 60
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2001 attccatggaagtacttattattgatatgtaggacaagaaacttgcatgatatcttatga 1942

                                                                        
Query: 61   cagcatatccctaccaaagagaacatagactaccaaactaccgggttcggaactaagtag 120
            |||| |||||||| ||||| |||||||||||| |||| |||  ||||| |||||||||| 
Sbjct: 1941 cagcttatcccta-caaagcgaacatagacta-caaaatacatggttcagaactaagtaa 1884

                       
Query: 121  tacaagcttat 131
            |||| ||||||
Sbjct: 1883 tacaggcttat 1873
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>gb|AF487459.1| Bromus tectorum acetolactate synthase (ALS) mRNA, partial cds
          Length = 2002

 Score =  157 bits (79), Expect = 1e-35
 Identities = 120/131 (91%), Gaps = 2/131 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    attccatggaagtacttattattgatatgtaggacaagaaacttgcatgacatcttatga 60
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2001 attccatggaagtacttattattgatatgtaggacaagaaacttgcatgatatcttatga 1942

                                                                        
Query: 61   cagcatatccctaccaaagagaacatagactaccaaactaccgggttcggaactaagtag 120
            |||| |||||||| ||||| |||||||||||| |||| |||  ||||| |||||||||| 
Sbjct: 1941 cagcttatcccta-caaagcgaacatagacta-caaaatacatggttcagaactaagtaa 1884

                       
Query: 121  tacaagcttat 131
            |||| ||||||
Sbjct: 1883 tacaggcttat 1873
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                          
Query: 15       cttattattgatatgtaggacaagaaacttgcatgacatctt 56
                |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 18338111 cttattattgatatgtaggacaagaaacttacatgatatctt 18338070
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>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0052M16
          Length = 145423

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                        
Query: 15     cttattattgatatgtaggacaagaaacttgcatgacatctt 56
              |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 139324 cttattattgatatgtaggacaagaaacttacatgatatctt 139283
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>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0001A11
          Length = 153252

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 15   cttattattgatatgtaggacaagaaacttgcatgacatctt 56
            |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 1035 cttattattgatatgtaggacaagaaacttacatgatatctt 994
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>gb|AY885675.1| Oryza sativa acetolactate synthase gene, complete cds
          Length = 2233

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 15   cttattattgatatgtaggacaagaaacttgcatgacatctt 56
            |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2209 cttattattgatatgtaggacaagaaacttacatgatatctt 2168
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>gb|AY885674.1| Oryza sativa (japonica cultivar-group) acetolactate synthase gene,
            complete cds
          Length = 2286

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 15   cttattattgatatgtaggacaagaaacttgcatgacatctt 56
            |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2262 cttattattgatatgtaggacaagaaacttacatgatatctt 2221
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>gb|AY885673.1| Oryza sativa acetolactate synthase gene, complete cds
          Length = 2251

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 15   cttattattgatatgtaggacaagaaacttgcatgacatctt 56
            |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2225 cttattattgatatgtaggacaagaaacttacatgatatctt 2184
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>dbj|AB049823.1| Oryza sativa ALS mRNA for acetolactate synthase, complete cds,
            herbicide resistant biotype
          Length = 2279

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 15   cttattattgatatgtaggacaagaaacttgcatgacatctt 56
            |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2240 cttattattgatatgtaggacaagaaacttacatgatatctt 2199
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>dbj|AB049822.1| Oryza sativa ALS mRNA for acetolactate synthase, complete cds,
            herbicide sensitive wild type
          Length = 2301

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 15   cttattattgatatgtaggacaagaaacttgcatgacatctt 56
            |||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2256 cttattattgatatgtaggacaagaaacttacatgatatctt 2215
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>gb|AC103630.10| Mus musculus chromosome 6, clone RP24-358D8, complete sequence
          Length = 184937

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    aacttgcatgacatcttatga 60
             |||||||||||||||||||||
Sbjct: 19319 aacttgcatgacatcttatga 19299
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>gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosome 16, complete sequence
          Length = 130390

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     agaaacttgcatgacatctt 56
              ||||||||||||||||||||
Sbjct: 127637 agaaacttgcatgacatctt 127656
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>emb|CR385021.12| Zebrafish DNA sequence from clone CH211-200N15 in linkage group 16,
             complete sequence
          Length = 148046

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tatatgaatgaaacaagtaa 148
             ||||||||||||||||||||
Sbjct: 41688 tatatgaatgaaacaagtaa 41669
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>gb|AC008942.6| Homo sapiens chromosome 5 clone CTD-2320O4, complete sequence
          Length = 148917

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ttatatgaatgaaacaagta 147
              ||||||||||||||||||||
Sbjct: 119325 ttatatgaatgaaacaagta 119344
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>emb|BX813336.4| Mouse DNA sequence from clone RP23-207B5 on chromosome 2, complete
             sequence
          Length = 142773

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   atatgaatgaaacaagtaaa 149
             ||||||||||||||||||||
Sbjct: 99852 atatgaatgaaacaagtaaa 99833
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      ttatatgaatgaaacaagta 147
                ||||||||||||||||||||
Sbjct: 26364606 ttatatgaatgaaacaagta 26364625
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>gb|AC098934.3| Homo sapiens chromosome 1 clone RP11-480I12, complete sequence
          Length = 201854

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    agtacttattattgatatgt 30
             ||||||||||||||||||||
Sbjct: 53212 agtacttattattgatatgt 53193
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>emb|CR812466.18| Zebrafish DNA sequence from clone CH211-269M1 in linkage group 1,
             complete sequence
          Length = 138505

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   atatgaatgaaacaagtaaa 149
             ||||||||||||||||||||
Sbjct: 30645 atatgaatgaaacaagtaaa 30626
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      ttatatgaatgaaacaagta 147
                ||||||||||||||||||||
Sbjct: 26292775 ttatatgaatgaaacaagta 26292794
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>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 133978

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ttatatgaatgaaacaagta 147
              ||||||||||||||||||||
Sbjct: 128590 ttatatgaatgaaacaagta 128609
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>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131689

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   ttatatgaatgaaacaagta 147
             ||||||||||||||||||||
Sbjct: 78879 ttatatgaatgaaacaagta 78898
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>gb|AC133940.4| Mus musculus BAC clone RP23-433D1 from 16, complete sequence
          Length = 172079

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    agaaacttgcatgacatctt 56
             ||||||||||||||||||||
Sbjct: 42900 agaaacttgcatgacatctt 42919
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>emb|AL731871.12| Mouse DNA sequence from clone RP23-111J19 on chromosome 2, complete
              sequence
          Length = 195003

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    gtaaactagaaaaacgcatg 164
              ||||||||||||||||||||
Sbjct: 128256 gtaaactagaaaaacgcatg 128275
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>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
              complete sequence
          Length = 144811

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 84     catagactaccaaactacc 102
              |||||||||||||||||||
Sbjct: 134147 catagactaccaaactacc 134129
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>ref|XM_720400.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00065)
           partial mRNA
          Length = 669

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 128 ttatatgaatgaaacaagt 146
           |||||||||||||||||||
Sbjct: 563 ttatatgaatgaaacaagt 545
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>gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, complete sequence
          Length = 243323

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 124    aagcttatatgaatgaaacaagt 146
              ||||||||||| |||||||||||
Sbjct: 101469 aagcttatatgtatgaaacaagt 101491
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>emb|AL359956.10| Human DNA sequence from clone RP11-438H17 on chromosome X, complete
             sequence
          Length = 62570

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 128   ttatatgaatgaaacaagt 146
             |||||||||||||||||||
Sbjct: 38568 ttatatgaatgaaacaagt 38550
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>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19,
            complete sequence
          Length = 156002

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 84   catagactaccaaactacc 102
            |||||||||||||||||||
Sbjct: 6486 catagactaccaaactacc 6468
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>gb|AC116914.5| Homo sapiens chromosome 17, clone CTD-3195I5, complete sequence
          Length = 138536

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 2     ttccatggaagtacttattattg 24
             ||||||| |||||||||||||||
Sbjct: 22548 ttccatgtaagtacttattattg 22526
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>gb|AC015528.14| Homo sapiens chromosome 8, clone RP11-179A23, complete sequence
          Length = 155518

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     ttattattgatatgtagga 34
              |||||||||||||||||||
Sbjct: 150355 ttattattgatatgtagga 150373
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>gb|AC118269.6| Homo sapiens chromosome 17, clone CTD-2383D6, complete sequence
          Length = 129758

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 2    ttccatggaagtacttattattg 24
            ||||||| |||||||||||||||
Sbjct: 6761 ttccatgtaagtacttattattg 6739
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>gb|AC105917.5| Homo sapiens BAC clone RP11-395C17 from 4, complete sequence
          Length = 191323

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   aaacaagtaaactagaaaa 157
             |||||||||||||||||||
Sbjct: 72713 aaacaagtaaactagaaaa 72731
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>gb|AC093811.3| Homo sapiens BAC clone RP11-355H11 from 4, complete sequence
          Length = 115335

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 1     attccatggaagtacttattatt 23
             ||||||||| |||||||||||||
Sbjct: 39627 attccatggcagtacttattatt 39649
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>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence
          Length = 166114

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 137    tgaaacaagtaaactagaaaaac 159
              ||||| |||||||||||||||||
Sbjct: 127874 tgaaaaaagtaaactagaaaaac 127896
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>gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosome 13, complete sequence
          Length = 201777

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 40     aacttgcatgacatcttatgacagcat 66
              ||||||||| | |||||||||||||||
Sbjct: 131929 aacttgcataatatcttatgacagcat 131955
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 84       catagactaccaaactacc 102
                |||||||||||||||||||
Sbjct: 21484397 catagactaccaaactacc 21484379
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>gb|AC025674.10| Homo sapiens chromosome 8, clone RP11-513O17, complete sequence
          Length = 152451

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    ttattattgatatgtagga 34
             |||||||||||||||||||
Sbjct: 17240 ttattattgatatgtagga 17258
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>gb|AC131005.3| Homo sapiens 3 BAC RP11-88K11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191231

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 133   tgaatgaaacaagtaaactagaa 155
             ||||||||||||| |||||||||
Sbjct: 83006 tgaatgaaacaagaaaactagaa 82984
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>emb|AL929152.24| Zebrafish DNA sequence from clone CH211-59L24, complete sequence
          Length = 172954

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 133    tgaatgaaacaagtaaact 151
              |||||||||||||||||||
Sbjct: 113033 tgaatgaaacaagtaaact 113051
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>gb|AF168787.1|AF168787 Homo sapiens vanilloid receptor gene, partial sequence; CARKL and CTNS
              genes, complete cds; TIP1 gene, partial cds; P2X5b and
              P2X5a genes, complete cds; and HUMINAE gene, partial cds
          Length = 200237

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 2      ttccatggaagtacttattattg 24
              ||||||| |||||||||||||||
Sbjct: 161977 ttccatgtaagtacttattattg 161955
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>gb|AC156495.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0005D12,
             complete sequence
          Length = 88500

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 149   actagaaaaacgcatggtt 167
             |||||||||||||||||||
Sbjct: 67577 actagaaaaacgcatggtt 67595
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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 123   caagcttatatgaatgaaa 141
             |||||||||||||||||||
Sbjct: 83640 caagcttatatgaatgaaa 83622
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>emb|CT030248.6| Mouse DNA sequence from clone RP24-328G14 on chromosome 13, complete
            sequence
          Length = 120984

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 40   aacttgcatgacatcttatgacagcat 66
            ||||||||| | |||||||||||||||
Sbjct: 2434 aacttgcataatatcttatgacagcat 2460
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>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete
              sequence
          Length = 191255

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 139    aaacaagtaaactagaaaa 157
              |||||||||||||||||||
Sbjct: 106541 aaacaagtaaactagaaaa 106523
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>emb|AL132827.2|CNS01DTP Human chromosome 14 DNA sequence BAC C-2149C7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 138016

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    ttattattgatatgtagga 34
             |||||||||||||||||||
Sbjct: 20787 ttattattgatatgtagga 20805
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>gb|AC127389.2| Homo sapiens BAC clone RP11-142N15 from UL, complete sequence
          Length = 140616

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 141   acaagtaaactagaaaaac 159
             |||||||||||||||||||
Sbjct: 74119 acaagtaaactagaaaaac 74101


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,437,772
Number of Sequences: 3902068
Number of extensions: 1437772
Number of successful extensions: 101808
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101589
Number of HSP's gapped (non-prelim): 217
length of query: 174
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 152
effective length of database: 17,147,199,772
effective search space: 2606374365344
effective search space used: 2606374365344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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