Clone Name | rbart43e10 |
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Clone Library Name | barley_pub |
>PROS_DROME (P29617) Protein prospero| Length = 1403 Score = 31.2 bits (69), Expect = 0.64 Identities = 22/78 (28%), Positives = 37/78 (47%) Frame = +2 Query: 65 QQHFPKIHKYVSLAQKQLIRKRIAVASNRPQLHNDSQARLEYREAHPDNW*HFISKWKER 244 QQH + L Q+Q+ ++ +A A+ RPQ+H+ + ARL R S+ E+ Sbjct: 762 QQHLQQ------LQQQQMEQQHVATAAPRPQMHHPAPARLPTRMGGAAGHTALKSELSEK 815 Query: 245 ASKLAFLFGNRLMASAGT 298 L + +M +GT Sbjct: 816 FQMLRANNNSSMMRMSGT 833
>RFE_MYCLE (P45830) Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl| 1-phosphate transferase (EC 2.7.8.-) Length = 398 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +1 Query: 1 TCKNVLYFGTGKIHILANMVSTTAFPKDTQICLT 102 T + YF TG + +LAN + A+P++ + +T Sbjct: 39 TAAIITYFATGLVGVLANRLEAVAYPRERDVHVT 72
>HH_DROME (Q02936) Protein hedgehog precursor [Contains: Protein hedgehog| N-product (Hh-Np) (N-Hh); Protein hedgehog C-product (C-Hh) (Hh-Cp)] Length = 421 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +2 Query: 146 NRPQLHNDSQARLEYREAHPDNW*HFISKWKERASKLAFLFGNRL 280 N QLH D A L AH +S W+ + KL F+F +R+ Sbjct: 261 NFVQLHTDGGAVLTVTPAH------LVSVWQPESQKLTFVFADRI 299
>DGAT1_HUMAN (O75907) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) (ACAT-related gene product 1) Length = 488 Score = 29.3 bits (64), Expect = 2.4 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%) Frame = -3 Query: 369 GGEGQRPQDCRQPVGAKIIG*NGLVPALAIKRLPNKNASLLALSFHLEMKCYQL-----S 205 GG ++ R +G G PA A PNK+ S H E++C++L S Sbjct: 22 GGPAAAEEEVRDAAAGPDVGAAGDAPAPA----PNKDGDAGVGSGHWELRCHRLQDSLFS 77 Query: 204 G*ASLYSRRAWLSLCN*GLLLATAIRFLIN 115 + + R L+ C L+L+ A FL N Sbjct: 78 SDSGFSNYRGILNWCVVMLILSNARLFLEN 107
>RFE_MYCTU (Q10606) Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl| 1-phosphate transferase (EC 2.7.8.-) Length = 404 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = +1 Query: 1 TCKNVLYFGTGKIHILANMVSTTAFPKDTQICLT 102 T + YF TG + +LA+ + A+P++ + +T Sbjct: 39 TAAIITYFATGPVRMLASRLGAVAYPRERDVHVT 72
>DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 491 Score = 28.1 bits (61), Expect = 5.4 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 5/90 (5%) Frame = -3 Query: 369 GGEGQRPQDCRQPVGAKIIG*NGLVPALAIKRLPNKNASLLALSFHLEMKCYQL-----S 205 GG ++ R +G G PA A P+K+A S H E++C++L S Sbjct: 25 GGPAAAEEEVRDAAAGPDMGAAGDAPAPA----PSKDADDGVASGHWELRCHRLQDSLFS 80 Query: 204 G*ASLYSRRAWLSLCN*GLLLATAIRFLIN 115 + + R L+ C L+L+ A FL N Sbjct: 81 SDSGFNNYRGILNWCVVMLILSNARLFLEN 110
>NUDT7_MOUSE (Q99P30) Peroxisomal coenzyme A diphosphatase NUDT7 (EC 3.6.1.-)| (Nucleoside diphosphate-linked moiety X motif 7) (Nudix motif 7) Length = 236 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +3 Query: 87 TNMSHLLKNN*SENE*QLQATGLSYTMTARRA*NTEKLTQITGSISFPNGRREP 248 T SHL N S L G Y M R+ +KL + G + FP G+R+P Sbjct: 30 TRYSHLSSNKFSVLVPLLARGGKLYLMFTVRS---DKLKREPGEVCFPGGKRDP 80
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 214 VAFHFQMEGESQQAGIFIR*SFDGQRRYQTILS 312 ++FH+ M G+ + G+F+ +F G R T+ S Sbjct: 294 LSFHYIMHGQGHEEGLFVYATFLGNIRKYTLFS 326
>PEPF_BACSU (O31605) Oligoendopeptidase F homolog (EC 3.4.24.-)| Length = 609 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = +2 Query: 68 QHFPKIHKYVSLAQKQLIRKRIAVASNRPQLHNDSQARLEYREA 199 +H P +H+Y++L +K L + + L D+ ++ Y EA Sbjct: 284 KHLPLLHRYIALRKKVLELDEVHIYDLYTPLVKDAGMKVTYEEA 327
>RAMP2_MOUSE (Q9WUP0) Receptor activity-modifying protein 2 precursor| Length = 189 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = -2 Query: 61 LPCWQEYESCLYQNIRRFC 5 LPCW EY+SC+ +++ +C Sbjct: 81 LPCWYEYKSCM-DSVKDWC 98
>ENV_FIVWO (Q05312) Env polyprotein (GP150 polyprotein) [Contains: Major| glycoprotein GP100; Glycoprotein GP36] Length = 854 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +2 Query: 161 HNDSQARLEYREAHPDNW*HFISKWKER 244 H D Q + + ++ P +W IS WK+R Sbjct: 368 HTDVQFQCQRTQSQPGSWIRAISSWKQR 395
>DIS3_SCHPO (P37202) Mitotic control protein dis3| Length = 970 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -1 Query: 284 PSNDYRIKMPACWLSPSIWK*NATSYLGELLCILGAPGCHCVTEA 150 P + K+PA P +WK N + +L+C + PGC + +A Sbjct: 476 PEEGHNWKVPADKTHP-LWK-NRKDFRDKLICSIDPPGCQDIDDA 518
>CYB_PICPJ (Q36507) Cytochrome b| Length = 386 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%) Frame = -2 Query: 244 SLLPF-GNEMLPVIWVSFSV 188 S +PF GN+++P IW SFSV Sbjct: 152 SAIPFIGNDLVPFIWGSFSV 171
>MRGRG_RAT (Q7TN39) Mas-related G-protein coupled receptor member G| Length = 289 Score = 27.3 bits (59), Expect = 9.2 Identities = 23/90 (25%), Positives = 36/90 (40%) Frame = -3 Query: 300 LVPALAIKRLPNKNASLLALSFHLEMKCYQLSG*ASLYSRRAWLSLCN*GLLLATAIRFL 121 L+PA A L N+ + L+ L +H W+S+ G+L +TA Sbjct: 139 LLPANACGLLYNRMSLLVCLKYH-------------------WVSVVWLGVLASTAC--- 176 Query: 120 INCF*ASETYLCIFGKCCCAYHVGKNMNLA 31 + +L +FG CC + K LA Sbjct: 177 -----GASMFLLVFGNCCSSQPPSKFCKLA 201 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,662,787 Number of Sequences: 219361 Number of extensions: 1157365 Number of successful extensions: 2732 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2699 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2732 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)