ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart43e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PROS_DROME (P29617) Protein prospero 31 0.64
2RFE_MYCLE (P45830) Putative undecaprenyl-phosphate alpha-N-acety... 30 1.4
3HH_DROME (Q02936) Protein hedgehog precursor [Contains: Protein ... 30 1.9
4DGAT1_HUMAN (O75907) Diacylglycerol O-acyltransferase 1 (EC 2.3.... 29 2.4
5RFE_MYCTU (Q10606) Putative undecaprenyl-phosphate alpha-N-acety... 28 4.1
6DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.... 28 5.4
7NUDT7_MOUSE (Q99P30) Peroxisomal coenzyme A diphosphatase NUDT7 ... 28 5.4
8ZAN_MOUSE (O88799) Zonadhesin precursor 28 7.0
9PEPF_BACSU (O31605) Oligoendopeptidase F homolog (EC 3.4.24.-) 28 7.0
10RAMP2_MOUSE (Q9WUP0) Receptor activity-modifying protein 2 precu... 28 7.0
11ENV_FIVWO (Q05312) Env polyprotein (GP150 polyprotein) [Contains... 28 7.0
12DIS3_SCHPO (P37202) Mitotic control protein dis3 28 7.0
13CYB_PICPJ (Q36507) Cytochrome b 27 9.2
14MRGRG_RAT (Q7TN39) Mas-related G-protein coupled receptor member G 27 9.2

>PROS_DROME (P29617) Protein prospero|
          Length = 1403

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 22/78 (28%), Positives = 37/78 (47%)
 Frame = +2

Query: 65  QQHFPKIHKYVSLAQKQLIRKRIAVASNRPQLHNDSQARLEYREAHPDNW*HFISKWKER 244
           QQH  +      L Q+Q+ ++ +A A+ RPQ+H+ + ARL  R           S+  E+
Sbjct: 762 QQHLQQ------LQQQQMEQQHVATAAPRPQMHHPAPARLPTRMGGAAGHTALKSELSEK 815

Query: 245 ASKLAFLFGNRLMASAGT 298
              L     + +M  +GT
Sbjct: 816 FQMLRANNNSSMMRMSGT 833



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>RFE_MYCLE (P45830) Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl|
           1-phosphate transferase (EC 2.7.8.-)
          Length = 398

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 1   TCKNVLYFGTGKIHILANMVSTTAFPKDTQICLT 102
           T   + YF TG + +LAN +   A+P++  + +T
Sbjct: 39  TAAIITYFATGLVGVLANRLEAVAYPRERDVHVT 72



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>HH_DROME (Q02936) Protein hedgehog precursor [Contains: Protein hedgehog|
           N-product (Hh-Np) (N-Hh); Protein hedgehog C-product
           (C-Hh) (Hh-Cp)]
          Length = 421

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 146 NRPQLHNDSQARLEYREAHPDNW*HFISKWKERASKLAFLFGNRL 280
           N  QLH D  A L    AH       +S W+  + KL F+F +R+
Sbjct: 261 NFVQLHTDGGAVLTVTPAH------LVSVWQPESQKLTFVFADRI 299



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>DGAT1_HUMAN (O75907) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase) (ACAT-related gene product
           1)
          Length = 488

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
 Frame = -3

Query: 369 GGEGQRPQDCRQPVGAKIIG*NGLVPALAIKRLPNKNASLLALSFHLEMKCYQL-----S 205
           GG     ++ R       +G  G  PA A    PNK+      S H E++C++L     S
Sbjct: 22  GGPAAAEEEVRDAAAGPDVGAAGDAPAPA----PNKDGDAGVGSGHWELRCHRLQDSLFS 77

Query: 204 G*ASLYSRRAWLSLCN*GLLLATAIRFLIN 115
             +   + R  L+ C   L+L+ A  FL N
Sbjct: 78  SDSGFSNYRGILNWCVVMLILSNARLFLEN 107



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>RFE_MYCTU (Q10606) Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl|
           1-phosphate transferase (EC 2.7.8.-)
          Length = 404

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 1   TCKNVLYFGTGKIHILANMVSTTAFPKDTQICLT 102
           T   + YF TG + +LA+ +   A+P++  + +T
Sbjct: 39  TAAIITYFATGPVRMLASRLGAVAYPRERDVHVT 72



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>DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase)
          Length = 491

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
 Frame = -3

Query: 369 GGEGQRPQDCRQPVGAKIIG*NGLVPALAIKRLPNKNASLLALSFHLEMKCYQL-----S 205
           GG     ++ R       +G  G  PA A    P+K+A     S H E++C++L     S
Sbjct: 25  GGPAAAEEEVRDAAAGPDMGAAGDAPAPA----PSKDADDGVASGHWELRCHRLQDSLFS 80

Query: 204 G*ASLYSRRAWLSLCN*GLLLATAIRFLIN 115
             +   + R  L+ C   L+L+ A  FL N
Sbjct: 81  SDSGFNNYRGILNWCVVMLILSNARLFLEN 110



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>NUDT7_MOUSE (Q99P30) Peroxisomal coenzyme A diphosphatase NUDT7 (EC 3.6.1.-)|
           (Nucleoside diphosphate-linked moiety X motif 7) (Nudix
           motif 7)
          Length = 236

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +3

Query: 87  TNMSHLLKNN*SENE*QLQATGLSYTMTARRA*NTEKLTQITGSISFPNGRREP 248
           T  SHL  N  S     L   G  Y M   R+   +KL +  G + FP G+R+P
Sbjct: 30  TRYSHLSSNKFSVLVPLLARGGKLYLMFTVRS---DKLKREPGEVCFPGGKRDP 80



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>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 214 VAFHFQMEGESQQAGIFIR*SFDGQRRYQTILS 312
           ++FH+ M G+  + G+F+  +F G  R  T+ S
Sbjct: 294 LSFHYIMHGQGHEEGLFVYATFLGNIRKYTLFS 326



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>PEPF_BACSU (O31605) Oligoendopeptidase F homolog (EC 3.4.24.-)|
          Length = 609

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 68  QHFPKIHKYVSLAQKQLIRKRIAVASNRPQLHNDSQARLEYREA 199
           +H P +H+Y++L +K L    + +      L  D+  ++ Y EA
Sbjct: 284 KHLPLLHRYIALRKKVLELDEVHIYDLYTPLVKDAGMKVTYEEA 327



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>RAMP2_MOUSE (Q9WUP0) Receptor activity-modifying protein 2 precursor|
          Length = 189

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 61  LPCWQEYESCLYQNIRRFC 5
           LPCW EY+SC+  +++ +C
Sbjct: 81  LPCWYEYKSCM-DSVKDWC 98



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>ENV_FIVWO (Q05312) Env polyprotein (GP150 polyprotein) [Contains: Major|
           glycoprotein GP100; Glycoprotein GP36]
          Length = 854

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 161 HNDSQARLEYREAHPDNW*HFISKWKER 244
           H D Q + +  ++ P +W   IS WK+R
Sbjct: 368 HTDVQFQCQRTQSQPGSWIRAISSWKQR 395



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>DIS3_SCHPO (P37202) Mitotic control protein dis3|
          Length = 970

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 284 PSNDYRIKMPACWLSPSIWK*NATSYLGELLCILGAPGCHCVTEA 150
           P   +  K+PA    P +WK N   +  +L+C +  PGC  + +A
Sbjct: 476 PEEGHNWKVPADKTHP-LWK-NRKDFRDKLICSIDPPGCQDIDDA 518



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>CYB_PICPJ (Q36507) Cytochrome b|
          Length = 386

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -2

Query: 244 SLLPF-GNEMLPVIWVSFSV 188
           S +PF GN+++P IW SFSV
Sbjct: 152 SAIPFIGNDLVPFIWGSFSV 171



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>MRGRG_RAT (Q7TN39) Mas-related G-protein coupled receptor member G|
          Length = 289

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 23/90 (25%), Positives = 36/90 (40%)
 Frame = -3

Query: 300 LVPALAIKRLPNKNASLLALSFHLEMKCYQLSG*ASLYSRRAWLSLCN*GLLLATAIRFL 121
           L+PA A   L N+ + L+ L +H                   W+S+   G+L +TA    
Sbjct: 139 LLPANACGLLYNRMSLLVCLKYH-------------------WVSVVWLGVLASTAC--- 176

Query: 120 INCF*ASETYLCIFGKCCCAYHVGKNMNLA 31
                 +  +L +FG CC +    K   LA
Sbjct: 177 -----GASMFLLVFGNCCSSQPPSKFCKLA 201


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,662,787
Number of Sequences: 219361
Number of extensions: 1157365
Number of successful extensions: 2732
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2732
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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