ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart43e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463680.1| Oryza sativa (japonica cultivar-group), predic... 48 0.021
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.021
3dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.021
4dbj|AK105800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.021
5dbj|AK104087.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.021
6dbj|AK072701.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.021
7dbj|AK067632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.021
8dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.021
9ref|XM_587049.2| PREDICTED: Bos taurus similar to G-protein coup... 44 0.32
10gb|BT025407.1| Bos taurus G protein-coupled receptor 114 (GPR114... 44 0.32
11emb|CR626934.1| Triticum aestivum 44 0.32
12emb|CR626926.1| Aegilops tauschii 44 0.32
13gb|AC162917.3| Mus musculus BAC clone RP23-379N7 from chromosome... 44 0.32
14gb|AY159805.1| Aegilops tauschii puroindoline a gene, complete cds 44 0.32
15gb|DP000036.1| Papio anubis target 106 genomic scaffold 44 0.32
16gb|DP000043.1| Macaca mulatta target 106 genomic scaffold 44 0.32
17gb|AC135358.3| Mus musculus BAC clone RP24-107J13 from 9, comple... 44 0.32
18gb|BT018425.1| Zea mays clone EL01N0362C11.d mRNA sequence 42 1.3
19gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 42 1.3
20gb|AC004894.1| Homo sapiens PAC clone RP4-808G16 from 7, complet... 42 1.3
21emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 o... 42 1.3
22gb|DQ083175.1| Oryza sativa (indica cultivar-group) clone 1S3A41... 42 1.3
23gb|AF306829.1|AF306829 Triticum urartu clone 581 cytosolic acety... 42 1.3
24gb|AF306827.1|AF306827 Triticum monococcum subsp. monococcum clo... 42 1.3
25gb|AF306824.1|AF306824 Triticum timopheevii subsp. armeniacum cl... 42 1.3
26gb|AF361796.1|AF361796 Homo sapiens serine/cysteine proteinase i... 42 1.3
27emb|AL132990.4|CNS01DTY Human chromosome 14 DNA sequence BAC R-2... 42 1.3
28emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-9... 42 1.3
29gb|M68516.1|HUMPCI Human protein C inhibitor gene, complete cds 42 1.3
30gb|AC116722.7| Mus musculus chromosome 3, clone RP23-257M16, com... 40 5.0
31gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 5.0
32gb|BT019303.1| Zea mays clone Contig976.F mRNA sequence 40 5.0
33gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 40 5.0
34gb|AC161484.4| Mus musculus chromosome 5, clone RP23-6C10, compl... 40 5.0
35gb|AC114655.12| Mus musculus chromosome 1, clone RP24-160J12, co... 40 5.0
36gb|AC164121.3| Mus musculus BAC clone RP24-406J12 from chromosom... 40 5.0
37ref|XM_979523.1| PREDICTED: Mus musculus F-box and leucine-rich ... 40 5.0
38gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold 40 5.0
39gb|AC115734.9| Mus musculus, clone RP23-466K3, complete sequence 40 5.0
40emb|BX510321.9| Zebrafish DNA sequence from clone CH211-255P13 i... 40 5.0
41gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold 40 5.0
42gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold 40 5.0
43gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clon... 40 5.0
44dbj|AK029566.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.0
45dbj|AK030172.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.0
46gb|AC153921.5| Mus musculus 10 BAC RP23-89C21 (Roswell Park Canc... 40 5.0
47ref|NM_177076.2| Mus musculus F-box and leucine-rich repeat prot... 40 5.0
48ref|XM_340869.2| PREDICTED: Rattus norvegicus BRCA1 interacting ... 40 5.0
49gb|AY103615.1| Zea mays PCO148672 mRNA sequence 40 5.0 
>ref|XM_463680.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1554

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 344  tcttgagggcgttgcccttctcctccaagctc 375
            |||||||||  |||||||||||||||||||||
Sbjct: 1537 tcttgagggaattgcccttctcctccaagctc 1506
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 344      tcttgagggcgttgcccttctcctccaagctc 375
                |||||||||  |||||||||||||||||||||
Sbjct: 40603260 tcttgagggaattgcccttctcctccaagctc 40603291
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0093F16
          Length = 160925

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 344   tcttgagggcgttgcccttctcctccaagctc 375
             |||||||||  |||||||||||||||||||||
Sbjct: 45238 tcttgagggaattgcccttctcctccaagctc 45269
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>dbj|AK105800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A10, full
            insert sequence
          Length = 1598

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 344  tcttgagggcgttgcccttctcctccaagctc 375
            |||||||||  |||||||||||||||||||||
Sbjct: 1353 tcttgagggaattgcccttctcctccaagctc 1322
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>dbj|AK104087.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B10, full
            insert sequence
          Length = 1590

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 344  tcttgagggcgttgcccttctcctccaagctc 375
            |||||||||  |||||||||||||||||||||
Sbjct: 1350 tcttgagggaattgcccttctcctccaagctc 1319
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>dbj|AK072701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139A20, full
            insert sequence
          Length = 1559

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 344  tcttgagggcgttgcccttctcctccaagctc 375
            |||||||||  |||||||||||||||||||||
Sbjct: 1351 tcttgagggaattgcccttctcctccaagctc 1320
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>dbj|AK067632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O12, full
            insert sequence
          Length = 1702

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 344  tcttgagggcgttgcccttctcctccaagctc 375
            |||||||||  |||||||||||||||||||||
Sbjct: 1351 tcttgagggaattgcccttctcctccaagctc 1320
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>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 344   tcttgagggcgttgcccttctcctccaagctc 375
             |||||||||  |||||||||||||||||||||
Sbjct: 83275 tcttgagggaattgcccttctcctccaagctc 83306
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>ref|XM_587049.2| PREDICTED: Bos taurus similar to G-protein coupled receptor 114
           (LOC509974), mRNA
          Length = 2754

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 233 tggaaggagagagccagcaagc 254
           ||||||||||||||||||||||
Sbjct: 779 tggaaggagagagccagcaagc 800
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>gb|BT025407.1| Bos taurus G protein-coupled receptor 114 (GPR114), mRNA,
           incomplete 3' cds
          Length = 1013

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 233 tggaaggagagagccagcaagc 254
           ||||||||||||||||||||||
Sbjct: 761 tggaaggagagagccagcaagc 782
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>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 6     caaaaacgtcttatattttggtacag 31
             |||||||||||||||||| |||||||
Sbjct: 26078 caaaaacgtcttatatttcggtacag 26053
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>emb|CR626926.1| Aegilops tauschii
          Length = 94421

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 6     caaaaacgtcttatattttggtacag 31
             |||||||||||||||||| |||||||
Sbjct: 24173 caaaaacgtcttatatttcggtacag 24148
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>gb|AC162917.3| Mus musculus BAC clone RP23-379N7 from chromosome 9, complete sequence
          Length = 189606

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 242    agagccagcaagctggcatttt 263
              ||||||||||||||||||||||
Sbjct: 157679 agagccagcaagctggcatttt 157658
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>gb|AY159805.1| Aegilops tauschii puroindoline a gene, complete cds
          Length = 3573

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 6    caaaaacgtcttatattttggtacag 31
            |||||||||||||||||| |||||||
Sbjct: 2446 caaaaacgtcttatatttcggtacag 2421
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>gb|DP000036.1| Papio anubis target 106 genomic scaffold
          Length = 492848

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 71    catttcccaaagatacacaaat 92
             ||||||||||||||||||||||
Sbjct: 40646 catttcccaaagatacacaaat 40625
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>gb|DP000043.1| Macaca mulatta target 106 genomic scaffold
          Length = 373358

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 71    catttcccaaagatacacaaat 92
             ||||||||||||||||||||||
Sbjct: 38753 catttcccaaagatacacaaat 38732
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>gb|AC135358.3| Mus musculus BAC clone RP24-107J13 from 9, complete sequence
          Length = 182075

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 242    agagccagcaagctggcatttt 263
              ||||||||||||||||||||||
Sbjct: 131400 agagccagcaagctggcatttt 131421
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>gb|BT018425.1| Zea mays clone EL01N0362C11.d mRNA sequence
          Length = 1479

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 343  gtcttgagggcgttgcccttctcct 367
            |||||||||| ||||||||||||||
Sbjct: 1335 gtcttgagggtgttgcccttctcct 1311



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 240  agagagccagcaagctggcatttt 263
            |||||||||||||||| |||||||
Sbjct: 1416 agagagccagcaagctagcatttt 1393
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 3     ctgcaaaaacgtcttatattttggt 27
             ||||||||||||||| |||||||||
Sbjct: 14432 ctgcaaaaacgtcttgtattttggt 14456
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>gb|AC004894.1| Homo sapiens PAC clone RP4-808G16 from 7, complete sequence
          Length = 164511

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 220    tttcatttccaaatggaagga 240
              |||||||||||||||||||||
Sbjct: 107204 tttcatttccaaatggaagga 107224
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>emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 on chromosome 1q24 Contains the
              5' end of the CD3Z gene for CD3Z antigen zeta polypeptide
              (TiT3 complex), an aldo-keto reductase family 1 member D1
              (delta 4-3-ketosteroid-5-beta-reductase) (AKR1D1)
              pseudogene, the CREG gene for cellular repressor of
              E1A-stimulated genes, a ribosomal protein S18 (RPS18)
              pseudogene, a novel gene, the 5' end of the gene for a
              novel protein and a CpG island, complete sequence
          Length = 215861

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     tttcccaaagatacacaaata 93
              |||||||||||||||||||||
Sbjct: 121359 tttcccaaagatacacaaata 121379
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>gb|DQ083175.1| Oryza sativa (indica cultivar-group) clone 1S3A41 mRNA sequence
          Length = 430

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 37/41 (90%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                    
Query: 152 cctcagttacacaatga-cagccaggcgcgcctagaataca 191
           ||||||||||||||  | |||||||| ||||||||||||||
Sbjct: 414 cctcagttacacaaatagcagccaggagcgcctagaataca 374
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>gb|AF306829.1|AF306829 Triticum urartu clone 581 cytosolic acetyl-CoA carboxylase gene,
           partial cds
          Length = 1812

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 3   ctgcaaaaacgtcttatattt 23
           |||||||||||||||||||||
Sbjct: 722 ctgcaaaaacgtcttatattt 702
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>gb|AF306827.1|AF306827 Triticum monococcum subsp. monococcum clone 437 cytosolic
           acetyl-CoA carboxylase gene, partial cds
          Length = 1812

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 3   ctgcaaaaacgtcttatattt 23
           |||||||||||||||||||||
Sbjct: 734 ctgcaaaaacgtcttatattt 754



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 3   ctgcaaaaacgtcttatattt 23
           |||||||||||||||||||||
Sbjct: 722 ctgcaaaaacgtcttatattt 702
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>gb|AF306824.1|AF306824 Triticum timopheevii subsp. armeniacum clone 453 cytosolic
           acetyl-CoA carboxylase gene, partial cds
          Length = 1812

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 3   ctgcaaaaacgtcttatattt 23
           |||||||||||||||||||||
Sbjct: 722 ctgcaaaaacgtcttatattt 702
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>gb|AF361796.1|AF361796 Homo sapiens serine/cysteine proteinase inhibitor clade A member 5
            (SERPINA5) gene, complete cds
          Length = 8145

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 189  acagagaagctcacccagataactggtagcatt 221
            ||||||||| ||||||||||| | |||||||||
Sbjct: 3786 acagagaagttcacccagatatcaggtagcatt 3818
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>emb|AL132990.4|CNS01DTY Human chromosome 14 DNA sequence BAC R-262P9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181004

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 189    acagagaagctcacccagataactggtagcatt 221
              ||||||||| ||||||||||| | |||||||||
Sbjct: 178817 acagagaagttcacccagatatcaggtagcatt 178849
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>emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-986E7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 214527

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 189   acagagaagctcacccagataactggtagcatt 221
             ||||||||| ||||||||||| | |||||||||
Sbjct: 34765 acagagaagttcacccagatatcaggtagcatt 34797
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>gb|M68516.1|HUMPCI Human protein C inhibitor gene, complete cds
          Length = 15571

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 189   acagagaagctcacccagataactggtagcatt 221
             ||||||||| ||||||||||| | |||||||||
Sbjct: 10248 acagagaagttcacccagatatcaggtagcatt 10280
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>gb|AC116722.7| Mus musculus chromosome 3, clone RP23-257M16, complete sequence
          Length = 207409

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   aatggaaggagagagccagc 250
             ||||||||||||||||||||
Sbjct: 45977 aatggaaggagagagccagc 45996
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 347     tgagggcgttgcccttctcc 366
               ||||||||||||||||||||
Sbjct: 1697524 tgagggcgttgcccttctcc 1697543
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>gb|BT019303.1| Zea mays clone Contig976.F mRNA sequence
          Length = 1639

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 240 agagagccagcaagctggcatttt 263
           |||||||||||||||| |||||||
Sbjct: 177 agagagccagcaagctagcatttt 200



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 160 acacaatgacagccaggcgcgcctagaataca 191
           |||||||||| |||||||  ||||||||||||
Sbjct: 100 acacaatgacggccaggcaagcctagaataca 131
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>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    caaaaacgtcttatattttg 25
            ||||||||||||||||||||
Sbjct: 2169 caaaaacgtcttatattttg 2150
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>gb|AC161484.4| Mus musculus chromosome 5, clone RP23-6C10, complete sequence
          Length = 249620

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatggaaggagagagccag 249
             ||||||||||||||||||||
Sbjct: 56534 aaatggaaggagagagccag 56553
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>gb|AC114655.12| Mus musculus chromosome 1, clone RP24-160J12, complete sequence
          Length = 162542

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tcatattcttgccaacatgg 58
             ||||||||||||||||||||
Sbjct: 38836 tcatattcttgccaacatgg 38817
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>gb|AC164121.3| Mus musculus BAC clone RP24-406J12 from chromosome 12, complete
             sequence
          Length = 169925

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tcttatattttggtacaggc 33
             ||||||||||||||||||||
Sbjct: 99892 tcttatattttggtacaggc 99873
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>ref|XM_979523.1| PREDICTED: Mus musculus F-box and leucine-rich repeat protein 13
           (Fbxl13), mRNA
          Length = 2305

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 aaatggaaggagagagccag 249
           ||||||||||||||||||||
Sbjct: 298 aaatggaaggagagagccag 317
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>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold
          Length = 574594

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     tttcccaaagatacacaaat 92
              ||||||||||||||||||||
Sbjct: 158347 tttcccaaagatacacaaat 158328
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>gb|AC115734.9| Mus musculus, clone RP23-466K3, complete sequence
          Length = 185209

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    aatggaaggagagagccagc 250
              ||||||||||||||||||||
Sbjct: 179872 aatggaaggagagagccagc 179891
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>emb|BX510321.9| Zebrafish DNA sequence from clone CH211-255P13 in linkage group 2,
              complete sequence
          Length = 160542

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     caaagatacacaaatatgtc 97
              ||||||||||||||||||||
Sbjct: 147305 caaagatacacaaatatgtc 147286
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>gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold
          Length = 355851

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tttcccaaagatacacaaat 92
             ||||||||||||||||||||
Sbjct: 43047 tttcccaaagatacacaaat 43028
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>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold
          Length = 387541

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tttcccaaagatacacaaat 92
             ||||||||||||||||||||
Sbjct: 54859 tttcccaaagatacacaaat 54840
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>gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clone 465 cytosolic acetyl-CoA
           carboxylase gene, partial cds
          Length = 1836

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   ctgcaaaaacgtcttatatt 22
           ||||||||||||||||||||
Sbjct: 722 ctgcaaaaacgtcttatatt 703
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>dbj|AK029566.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921539K22 product:hypothetical F-box
           domain containing protein, full insert sequence
          Length = 2533

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 aaatggaaggagagagccag 249
           ||||||||||||||||||||
Sbjct: 624 aaatggaaggagagagccag 643
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>dbj|AK030172.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933409A11 product:hypothetical F-box
           domain containing protein, full insert sequence
          Length = 2345

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 aaatggaaggagagagccag 249
           ||||||||||||||||||||
Sbjct: 605 aaatggaaggagagagccag 624
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>gb|AC153921.5| Mus musculus 10 BAC RP23-89C21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 212543

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     ttcatattcttgccaacatg 57
              ||||||||||||||||||||
Sbjct: 176611 ttcatattcttgccaacatg 176592
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>ref|NM_177076.2| Mus musculus F-box and leucine-rich repeat protein 13 (Fbxl13),
           mRNA
          Length = 2533

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 aaatggaaggagagagccag 249
           ||||||||||||||||||||
Sbjct: 624 aaatggaaggagagagccag 643
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>ref|XM_340869.2| PREDICTED: Rattus norvegicus BRCA1 interacting protein C-terminal
            helicase 1 (predicted) (Brip1_predicted), mRNA
          Length = 3431

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 14   tcttatattttggtacaggcaaga 37
            |||||| |||||||||||||||||
Sbjct: 1731 tcttattttttggtacaggcaaga 1708
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>gb|AY103615.1| Zea mays PCO148672 mRNA sequence
          Length = 1731

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 160  acacaatgacagccaggcgcgcctagaataca 191
            |||||||||| |||||||  ||||||||||||
Sbjct: 1614 acacaatgacggccaggcaagcctagaataca 1583



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 240  agagagccagcaagctggcatttt 263
            |||||||||||||||| |||||||
Sbjct: 1537 agagagccagcaagctagcatttt 1514


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,056,775
Number of Sequences: 3902068
Number of extensions: 4056775
Number of successful extensions: 76339
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76199
Number of HSP's gapped (non-prelim): 132
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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