>COX12_YEAST (Q01519) Cytochrome c oxidase polypeptide VIb (EC 1.9.3.1) (AED)|
          Length = 82

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +1

Query: 28  YKFCTNYYNPD--TCTVYWKTTTELDNISWVKNW 123
           Y  C N    D   C V+WKT   L  + W++ W
Sbjct: 33  YHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKW 66

>POLG_BTMV (Q6XW15) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral gen
          Length = 3085

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 43   NYYNPDTCTVYWKTTTELDNISWVKNWGH 129
            NY+ P T     K  + ++++ WVK+W H
Sbjct: 2224 NYFVPFTDDFQSKYLSNIESLEWVKHWRH 2252

>SYI_GEOSL (Q747X9) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 923

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 79  KTTTELDNISWVKNWG 126
           K  TE+D +SWV  WG
Sbjct: 427 KALTEIDRVSWVPKWG 442


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,637,243
Number of Sequences: 219361
Number of extensions: 273494
Number of successful extensions: 901
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)