ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart43e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 i... 46 0.037
2gb|AC090711.3| Homo sapiens chromosome 8 clone RP11-89H1 map 8q2... 44 0.15
3gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, com... 44 0.15
4gb|AC069280.10| Homo sapiens BAC clone RP11-3P22 from 7, complet... 42 0.58
5emb|CR932361.9| Zebrafish DNA sequence from clone DKEY-158P2 in ... 42 0.58
6emb|BX927129.10| Zebrafish DNA sequence from clone DKEY-158N21 i... 42 0.58
7gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, comp... 42 0.58
8gb|AE002160.2| Chlamydia muridarum Nigg, complete genome 42 0.58
9gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N1... 42 0.58
10gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, comp... 42 0.58
11gb|AC093042.3| Homo sapiens BAC clone RP11-765C7 from 2, complet... 42 0.58
12gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, com... 42 0.58
13gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.3
14gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, compl... 40 2.3
15emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chr... 40 2.3
16gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.3
17emb|AL133338.8| Human DNA sequence from clone RP3-467N11 on chro... 40 2.3
18gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome... 40 2.3
19gb|AC149226.11| Danio rerio clone ch211-252j18, complete sequence 40 2.3
20gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome... 40 2.3
21dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
22gb|AC147283.3| Pan troglodytes BAC clone RP43-94K2 from chromoso... 40 2.3
23gb|AC083861.2|AC083861 Homo sapiens chromosome 7 clone RP11-164E... 40 2.3
24gb|AC078843.2|AC078843 Homo sapiens chromosome 7 clone RP11-59F6... 40 2.3
25dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.3
26emb|AL445363.7|CNS07ECY Human chromosome 14 DNA sequence BAC R-6... 40 2.3
27emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chro... 40 2.3
28gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 2.3
29emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in li... 40 2.3
30dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 2.3
31gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, comp... 38 9.0
32gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosom... 38 9.0
33ref|XM_419993.1| PREDICTED: Gallus gallus similar to selective L... 38 9.0
34gb|AF241732.1| Homo sapiens chromosome X clone XXcos-P117 map p1... 38 9.0
35gb|AC130220.3| Mus musculus BAC clone RP23-140M6 from chromosome... 38 9.0
36gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, com... 38 9.0
37gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, co... 38 9.0
38gb|AC133910.6| Mus musculus chromosome 14, clone RP24-484F23, co... 38 9.0
39gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, co... 38 9.0
40emb|CR376839.12| Zebrafish DNA sequence from clone DKEY-75G22 in... 38 9.0
41gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome ... 38 9.0
42gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, comple... 38 9.0
43ref|XM_643073.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 38 9.0
44gb|AC094014.3| Papio anubis clone RP41-371B12, complete sequence 38 9.0
45emb|AL009178.4|HS431P23 Human DNA sequence from clone RP3-431P23... 38 9.0
46emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 38 9.0
47emb|AJ294725.1|ALO294725 Astasia longa complete chloroplast genome 38 9.0
48emb|AL645752.9| Mouse DNA sequence from clone RP23-244K22 on chr... 38 9.0
49gb|U23170.2| Caenorhabditis elegans cosmid F58F12, complete sequ... 38 9.0
50gb|AC149601.3| Medicago truncatula chromosome 7 BAC clone mth2-2... 38 9.0
51gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome... 38 9.0
52dbj|AK084276.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 38 9.0
53emb|BX784036.6| Zebrafish DNA sequence from clone CH211-223P14 i... 38 9.0
54gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map... 38 9.0
55gb|AC018891.9| Homo sapiens BAC clone RP11-498M11 from 2, comple... 38 9.0
56gb|AC026355.13| Homo sapiens 3 BAC RP11-114M1 (Roswell Park Canc... 38 9.0
57gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complet... 38 9.0
58emb|CT025609.16| Mouse DNA sequence from clone RP23-202B14 on ch... 38 9.0
59gb|AY736146.1| Salmonella typhimurium bacteriophage ES18, comple... 38 9.0
60dbj|AP000648.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 38 9.0
61dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 9.0
62emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on ch... 38 9.0
63dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 38 9.0
64dbj|AP006698.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 9.0
65emb|AL122020.5|CNS01DSV Human chromosome 14 DNA sequence BAC C-3... 38 9.0 
>emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 in linkage group 20,
             complete sequence
          Length = 128296

 Score = 46.1 bits (23), Expect = 0.037
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 114   aacatggatgcatttggatttgc 136
             |||||||||||||||||||||||
Sbjct: 47497 aacatggatgcatttggatttgc 47475



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   atggatgcatttggatttgc 136
             ||||||||||||||||||||
Sbjct: 46879 atggatgcatttggatttgc 46860
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>gb|AC090711.3| Homo sapiens chromosome 8 clone RP11-89H1 map 8q21-q23, complete
             sequence
          Length = 153053

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 25    atttattcaatggagaaacttttacaactc 54
             |||| ||||||||| |||||||||||||||
Sbjct: 35388 attttttcaatggaaaaacttttacaactc 35359
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>gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, complete sequence
          Length = 145544

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 25    atttattcaatggagaaacttttacaactc 54
             |||| ||||||||| |||||||||||||||
Sbjct: 84355 attttttcaatggaaaaacttttacaactc 84384
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>gb|AC069280.10| Homo sapiens BAC clone RP11-3P22 from 7, complete sequence
          Length = 167563

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 142    aaaaattaatttagagacgaggtct 166
              ||||||| |||||||||||||||||
Sbjct: 134005 aaaaatttatttagagacgaggtct 134029
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>emb|CR932361.9| Zebrafish DNA sequence from clone DKEY-158P2 in linkage group 13,
             complete sequence
          Length = 46139

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   gagaaaaattaatttagagac 159
             |||||||||||||||||||||
Sbjct: 21014 gagaaaaattaatttagagac 21034
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>emb|BX927129.10| Zebrafish DNA sequence from clone DKEY-158N21 in linkage group 13,
              complete sequence
          Length = 154491

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 139    gagaaaaattaatttagagac 159
              |||||||||||||||||||||
Sbjct: 144729 gagaaaaattaatttagagac 144749
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>gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, complete sequence
          Length = 81252

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   ttgcaggagaaaaattaattt 153
             |||||||||||||||||||||
Sbjct: 15467 ttgcaggagaaaaattaattt 15447
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>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 128    tggatttgcaggagaaaaatt 148
              |||||||||||||||||||||
Sbjct: 475564 tggatttgcaggagaaaaatt 475544
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>gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N15, complete sequence
          Length = 180568

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 146   attaatttagagacgaggtct 166
             |||||||||||||||||||||
Sbjct: 27684 attaatttagagacgaggtct 27664
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>gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, complete sequence
          Length = 176199

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   ttgcaggagaaaaattaattt 153
             |||||||||||||||||||||
Sbjct: 33052 ttgcaggagaaaaattaattt 33072
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>gb|AC093042.3| Homo sapiens BAC clone RP11-765C7 from 2, complete sequence
          Length = 57491

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   ttgcaggagaaaaattaattt 153
             |||||||||||||||||||||
Sbjct: 31194 ttgcaggagaaaaattaattt 31174
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>gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, complete sequence
          Length = 170460

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 30     ttcaatggagaaacttttacaactc 54
              ||||||||| |||||||||||||||
Sbjct: 151426 ttcaatggaaaaacttttacaactc 151402
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>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tttatttattcaatggagaa 41
             ||||||||||||||||||||
Sbjct: 63221 tttatttattcaatggagaa 63240
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>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   tggatttgcaggagaaaaat 147
             ||||||||||||||||||||
Sbjct: 15399 tggatttgcaggagaaaaat 15418
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>emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chromosome 6 Contains a
             novel pseudogene, complete sequence
          Length = 163869

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    attcaatggagaaactttta 48
             ||||||||||||||||||||
Sbjct: 39215 attcaatggagaaactttta 39196
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>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tttatttattcaatggagaa 41
             ||||||||||||||||||||
Sbjct: 62061 tttatttattcaatggagaa 62080
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>emb|AL133338.8| Human DNA sequence from clone RP3-467N11 on chromosome 6q16.1-16.3
             Contains the 5' end of the RNAH gene for an RNA helicase
             and a CpG island, complete sequence
          Length = 120314

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   gagaaaaattaatttagaga 158
             ||||||||||||||||||||
Sbjct: 35205 gagaaaaattaatttagaga 35186
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>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    tggatttgcaggagaaaaat 147
              ||||||||||||||||||||
Sbjct: 168259 tggatttgcaggagaaaaat 168240
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>gb|AC149226.11| Danio rerio clone ch211-252j18, complete sequence
          Length = 154059

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     gaaggcaaactggagcttta 25
             ||||||||||||||||||||
Sbjct: 69953 gaaggcaaactggagcttta 69972
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>gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome 12, complete sequence
          Length = 161791

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aaggcaaactggagctttat 26
             ||||||||||||||||||||
Sbjct: 64903 aaggcaaactggagctttat 64884
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      tttatttattcaatggagaa 41
               ||||||||||||||||||||
Sbjct: 5376547 tttatttattcaatggagaa 5376566
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>gb|AC147283.3| Pan troglodytes BAC clone RP43-94K2 from chromosome 7, complete
             sequence
          Length = 171112

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   caggagaaaaattaatttag 155
             ||||||||||||||||||||
Sbjct: 45040 caggagaaaaattaatttag 45021
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>gb|AC083861.2|AC083861 Homo sapiens chromosome 7 clone RP11-164E6, complete sequence
          Length = 147288

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    caggagaaaaattaatttag 155
              ||||||||||||||||||||
Sbjct: 102134 caggagaaaaattaatttag 102153
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>gb|AC078843.2|AC078843 Homo sapiens chromosome 7 clone RP11-59F6, complete sequence
          Length = 179416

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    caggagaaaaattaatttag 155
              ||||||||||||||||||||
Sbjct: 154305 caggagaaaaattaatttag 154286
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>dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008B14, full
            insert sequence
          Length = 3756

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   tttatttattcaatggagaa 41
            ||||||||||||||||||||
Sbjct: 3680 tttatttattcaatggagaa 3699
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>emb|AL445363.7|CNS07ECY Human chromosome 14 DNA sequence BAC R-671J11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181987

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    ttaatttagagacgaggtct 166
              ||||||||||||||||||||
Sbjct: 120425 ttaatttagagacgaggtct 120406
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>emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chromosome 12, complete
              sequence
          Length = 224188

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    tggatttgcaggagaaaaat 147
              ||||||||||||||||||||
Sbjct: 194602 tggatttgcaggagaaaaat 194621
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     tggatttgcaggagaaaaat 147
               ||||||||||||||||||||
Sbjct: 1448261 tggatttgcaggagaaaaat 1448280
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>emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in linkage group 15,
             complete sequence
          Length = 224998

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gaaggcaaactggagcttta 25
             ||||||||||||||||||||
Sbjct: 25502 gaaggcaaactggagcttta 25483
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     tggatttgcaggagaaaaat 147
               ||||||||||||||||||||
Sbjct: 1364489 tggatttgcaggagaaaaat 1364508
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>gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, complete sequence
          Length = 196065

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 133  ttgcaggagaaaaattaatttag 155
            |||||||||||||||| ||||||
Sbjct: 1071 ttgcaggagaaaaatttatttag 1093
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>gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosome 14, complete sequence
          Length = 214057

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 145    aattaatttagagacgaggtctt 167
              ||||||||||||||| |||||||
Sbjct: 140949 aattaatttagagacaaggtctt 140927
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>ref|XM_419993.1| PREDICTED: Gallus gallus similar to selective LIM-binding factor
            Wimple (LOC421983), mRNA
          Length = 5862

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 126  tttggatttgcaggagaaa 144
            |||||||||||||||||||
Sbjct: 2967 tttggatttgcaggagaaa 2985
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>gb|AF241732.1| Homo sapiens chromosome X clone XXcos-P117 map p11.4, complete sequence
          Length = 42930

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    aatgcaacaaaccaagtag 80
             |||||||||||||||||||
Sbjct: 29050 aatgcaacaaaccaagtag 29068
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>gb|AC130220.3| Mus musculus BAC clone RP23-140M6 from chromosome 6, complete sequence
          Length = 200785

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     aacacaatgcaacaaacca 75
              |||||||||||||||||||
Sbjct: 189896 aacacaatgcaacaaacca 189914
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>gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, complete sequence
          Length = 255673

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aacacaatgcaacaaacca 75
             |||||||||||||||||||
Sbjct: 15450 aacacaatgcaacaaacca 15468
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>gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, complete sequence
          Length = 170688

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 131    atttgcaggagaaaaattaatttagag 157
              |||||||||||||| ||||| ||||||
Sbjct: 164654 atttgcaggagaaagattaagttagag 164628
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>gb|AC133910.6| Mus musculus chromosome 14, clone RP24-484F23, complete sequence
          Length = 235453

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 130    gatttgcaggagaaaaatt 148
              |||||||||||||||||||
Sbjct: 120823 gatttgcaggagaaaaatt 120805
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>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence
          Length = 208907

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     gacatgcacttaaacaaca 98
              |||||||||||||||||||
Sbjct: 136097 gacatgcacttaaacaaca 136115
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>emb|CR376839.12| Zebrafish DNA sequence from clone DKEY-75G22 in linkage group 2,
             complete sequence
          Length = 127371

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    tttattcaatggagaaact 44
             |||||||||||||||||||
Sbjct: 94019 tttattcaatggagaaact 94001
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>gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome 1, complete sequence
          Length = 200202

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 133   ttgcaggagaaaaattaatttag 155
             |||||||||||||||| ||||||
Sbjct: 43181 ttgcaggagaaaaatttatttag 43203
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>gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, complete sequence
          Length = 152406

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 106   atcttcaaaacatggatgcattt 128
             |||||||||||| ||||||||||
Sbjct: 86965 atcttcaaaacacggatgcattt 86987
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>ref|XM_643073.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (528.t00001)
           partial mRNA
          Length = 2586

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 125 atttggatttgcaggagaa 143
           |||||||||||||||||||
Sbjct: 345 atttggatttgcaggagaa 363
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>gb|AC094014.3| Papio anubis clone RP41-371B12, complete sequence
          Length = 161946

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 153    tagagacgaggtcttgaaa 171
              |||||||||||||||||||
Sbjct: 109141 tagagacgaggtcttgaaa 109159
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>emb|AL009178.4|HS431P23 Human DNA sequence from clone RP3-431P23 on chromosome 6q27 Contains the
              5' end of the MLLT4 gene for myeloid/lymphoid or
              mixed-lineage leukemia (trithorax (Drosophila) homolog)
              translocated gene protein 4 (AF-6, Afadin, ALL-1 fusion
              partner), genes HGC6.4 and HGC6.2, a serine
              palmitoyltransferase long chain base subunit 2 (SPTLC2)
              (LCB2) pseudogene and two CpG islands, complete sequence
          Length = 147971

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 146    attaatttagagacgaggtcttg 168
              |||| ||||||||||||||||||
Sbjct: 146821 attattttagagacgaggtcttg 146843
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 120     gatgcatttggatttgcag 138
               |||||||||||||||||||
Sbjct: 2078172 gatgcatttggatttgcag 2078154
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>emb|AJ294725.1|ALO294725 Astasia longa complete chloroplast genome
          Length = 73345

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    aaacttttacaactcgcaa 58
             |||||||||||||||||||
Sbjct: 12187 aaacttttacaactcgcaa 12169
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>emb|AL645752.9| Mouse DNA sequence from clone RP23-244K22 on chromosome 11 Contains the
             5' end of the Gabra1 gene for gamma-aminobutyric acid
             (GABA-A) receptor, subunit alpha 1, complete sequence
          Length = 116840

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 113   aaacatggatgcatttgga 131
             |||||||||||||||||||
Sbjct: 72580 aaacatggatgcatttgga 72562
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>gb|U23170.2| Caenorhabditis elegans cosmid F58F12, complete sequence
          Length = 22625

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    tggagctttatttattcaa 34
             |||||||||||||||||||
Sbjct: 11344 tggagctttatttattcaa 11362
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>gb|AC149601.3| Medicago truncatula chromosome 7 BAC clone mth2-28b24, complete
             sequence
          Length = 112486

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 116   catggatgcatttggattt 134
             |||||||||||||||||||
Sbjct: 50160 catggatgcatttggattt 50178
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>gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome 13, complete sequence
          Length = 210995

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 95     aacaggaatcgatcttcaaaaca 117
              ||||||||| |||||||||||||
Sbjct: 189942 aacaggaatggatcttcaaaaca 189920
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>dbj|AK084276.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230016O17
           product:unclassifiable, full insert sequence
          Length = 2938

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 131 atttgcaggagaaaaattaatttagag 157
           |||||||||||||| ||||| ||||||
Sbjct: 670 atttgcaggagaaagattaagttagag 644
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>emb|BX784036.6| Zebrafish DNA sequence from clone CH211-223P14 in linkage group 2,
             complete sequence
          Length = 162047

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    tttatttattcaatggaga 40
             |||||||||||||||||||
Sbjct: 77363 tttatttattcaatggaga 77381
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>gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map human ortholog p11.4,
              complete sequence
          Length = 160565

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 62     aatgcaacaaaccaagtag 80
              |||||||||||||||||||
Sbjct: 100246 aatgcaacaaaccaagtag 100264
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>gb|AC018891.9| Homo sapiens BAC clone RP11-498M11 from 2, complete sequence
          Length = 174074

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 137   aggagaaaaattaatttag 155
             |||||||||||||||||||
Sbjct: 66634 aggagaaaaattaatttag 66616
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>gb|AC026355.13| Homo sapiens 3 BAC RP11-114M1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 157439

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 136    caggagaaaaattaattta 154
              |||||||||||||||||||
Sbjct: 126072 caggagaaaaattaattta 126090
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>gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complete sequence
          Length = 196451

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 124   catttggatttgcaggagaaaaa 146
             ||||||||||| |||||||||||
Sbjct: 17202 catttggattttcaggagaaaaa 17224
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>emb|CT025609.16| Mouse DNA sequence from clone RP23-202B14 on chromosome 13, complete
             sequence
          Length = 83406

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 131   atttgcaggagaaaaattaatttagag 157
             |||||||||||||| ||||| ||||||
Sbjct: 73072 atttgcaggagaaagattaagttagag 73046
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>gb|AY736146.1| Salmonella typhimurium bacteriophage ES18, complete sequence
          Length = 46900

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   gcaggagaaaaattaattt 153
             |||||||||||||||||||
Sbjct: 23489 gcaggagaaaaattaattt 23507
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>dbj|AP000648.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-76D16, complete
              sequence
          Length = 149744

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 142    aaaaattaatttagagacgaggtcttg 168
              ||||| |||||||||||| ||||||||
Sbjct: 144794 aaaaaataatttagagacaaggtcttg 144820
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>dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete
             sequence
          Length = 165703

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 142   aaaaattaatttagagacgaggtcttg 168
             ||||| |||||||||||| ||||||||
Sbjct: 37512 aaaaaataatttagagacaaggtcttg 37538
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>emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on chromosome 14, complete
              sequence
          Length = 216611

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 145    aattaatttagagacgaggtctt 167
              ||||||||||||||| |||||||
Sbjct: 197630 aattaatttagagacaaggtctt 197608
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 129    ggatttgcaggagaaaaattaat 151
              ||||||||| |||||||||||||
Sbjct: 446374 ggatttgcaagagaaaaattaat 446352
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>dbj|AP006698.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04O06, TM0487,
             complete sequence
          Length = 108174

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 59    cacaatgcaacaaaccaag 77
             |||||||||||||||||||
Sbjct: 31893 cacaatgcaacaaaccaag 31911
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>emb|AL122020.5|CNS01DSV Human chromosome 14 DNA sequence BAC C-3035D6 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 149904

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 139    gagaaaaattaatttagag 157
              |||||||||||||||||||
Sbjct: 112050 gagaaaaattaatttagag 112032


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,407,322
Number of Sequences: 3902068
Number of extensions: 2407322
Number of successful extensions: 181727
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 181334
Number of HSP's gapped (non-prelim): 393
length of query: 183
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 161
effective length of database: 17,147,199,772
effective search space: 2760699163292
effective search space used: 2760699163292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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