ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart43e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 36 0.031
2RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 35 0.092
3RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 34 0.12
4DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100... 33 0.20
5CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... 33 0.20
6LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A ... 33 0.35
7NID1_MOUSE (P10493) Nidogen-1 precursor (Entactin) 31 1.0
8PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po... 30 2.3
9HGD_ARATH (Q9ZRA2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) ... 30 2.9
10BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC ... 30 2.9
11SYD_XYLFA (Q9PCC5) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar... 29 3.8
12BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 29 5.0
13MOS_XENLA (P12965) Serine/threonine-protein kinase mos (EC 2.7.1... 29 5.0
14BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 ... 29 5.0
15Y833_TREPA (O83805) Hypothetical protein TP0833 precursor 28 6.6
16PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 28 6.6
17LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related pr... 28 6.6
18MED14_CAEEL (Q03570) RNA polymerase II mediator complex subunit ... 28 6.6
19MMGL_RAT (P49301) Macrophage asialoglycoprotein-binding protein ... 28 6.6
20J1S_HCMVA (P17144) Hypothetical protein J1S 28 8.6
21BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11... 28 8.6
22BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precurso... 28 8.6
23TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 28 8.6
24POL2_BRAV (Q9YK98) RNA2 polyprotein (P2) [Contains: P2A protein;... 28 8.6
25KCNKC_HUMAN (Q9HB15) Potassium channel subfamily K member 12 (Ta... 28 8.6
26FLII_MOUSE (Q9JJ28) Protein flightless-1 homolog 28 8.6
27ASGR1_MOUSE (P34927) Asialoglycoprotein receptor 1 (ASGPR 1) (AS... 28 8.6
28BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor 28 8.6

>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE 314
           +V+ N+L+GEIP  IC LPNL+    + N   GE
Sbjct: 754 DVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGE 787



 Score = 32.7 bits (73), Expect = 0.35
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE 314
           +V+NN L+GEIP  I  L NL N     N F G+
Sbjct: 168 DVSNNSLSGEIPPEIGKLSNLSNLYMGLNSFSGQ 201



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGEPHRCL----EVPHIDDRQNCIAG 257
           N+ANN L G IPES   L +L     + N   G     L    E+ H+D   N ++G
Sbjct: 658 NLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSG 714



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 412 VANNMLAGEIPESICALPNLKNFTYSHNFFCG 317
           +ANN  +GEIP  I   P LK+ + + N   G
Sbjct: 336 LANNRFSGEIPHEIEDCPMLKHLSLASNLLSG 367



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG 317
           +++NN L+GEIP S+  L NL     S N   G
Sbjct: 610 SLSNNHLSGEIPASLSRLTNLTILDLSGNALTG 642



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 34.7 bits (78), Expect = 0.092
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE 314
           N+ANN L+GEIP+ +  LP L     S N F GE
Sbjct: 529 NLANNHLSGEIPKEVGILPVLNYLDLSSNQFSGE 562



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 412 VANNMLAGEIPESICALPNLKNFTYSHNFFCG 317
           ++NN L+G+IP     LP L     S N F G
Sbjct: 410 LSNNKLSGQIPHGFWGLPRLSLLELSDNSFTG 441



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 406 NNMLAGEIPESICALPNLKNFTYSHNFFCGE 314
           NN  +GE+PES+  +  LK F  S N   G+
Sbjct: 269 NNSFSGELPESMGNMTTLKRFDASMNKLTGK 299



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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE-PHRCLEVPHID 281
           ++++N   G IP+++ AL NL+N +   N   G  P   L +PH++
Sbjct: 122 DLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIGPFPESLLSIPHLE 167



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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE-----PHRCLEVPHIDDRQNCIAGRP 251
           ++++N L+G IP+S+ +   + +   SHN  CG      P   LE     D Q C+ G P
Sbjct: 309 DLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQ-CLCGGP 367



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>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
 Frame = -3

Query: 412 VANNMLAGEIPESICALPNLKNFTYSHNFFCGE-PHRCLEVPHID----DRQNCIAGRPD 248
           ++NN  +GEIP +I   PNL+      N F G  P    E+ H+        N   G PD
Sbjct: 463 LSNNWFSGEIPPAIGNFPNLQTLFLDRNRFRGNIPREIFELKHLSRINTSANNITGGIPD 522



 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG----EPHRCLEVPHIDDRQNCIAG 257
           +V++N L G IP+ +C    L+    S+NFF G    E  +C  +  I   +N + G
Sbjct: 367 DVSDNHLTGLIPKDLCRGEKLEMLILSNNFFFGPIPEELGKCKSLTKIRIVKNLLNG 423



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>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3075

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = +3

Query: 177  DCPCAAHCAGGRWRNSMHCSPGRWS--GRPAMQFCRSSMWGTSRHRC 311
            +C C  H  GG+      C  G W        Q C  S+ G++ HRC
Sbjct: 1013 ECVCPPHTQGGKCEE---CEDGHWGYDAEVGCQACNCSLVGSTHHRC 1056



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>NID1_MOUSE (P10493) Nidogen-1 precursor (Entactin)|
          Length = 1245

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = -3

Query: 304 CLEVPHIDDRQNCIAGRPDQRPGEQCIEFLHR----PPAQCAAHGQSS 173
           C+E  H  DR  C+A   DQRP   C   LH       AQC   G SS
Sbjct: 736 CVEGYHFSDRGTCVAAE-DQRPINYCETGLHNCDIPQRAQCIYMGGSS 782



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>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE--------PHRCLEVPHIDDRQNCIA 260
           ++++N + G +P S+ AL  L+    S+N  CG          H C    H      C  
Sbjct: 267 DLSHNRIRGTVPRSLAALSTLQTLDLSYNRLCGPLPRLHGVIRHGCKPYEH----NQCAG 322

Query: 259 GRP 251
           G P
Sbjct: 323 GAP 325



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>HGD_ARATH (Q9ZRA2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 461

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = -3

Query: 358 NLKNFTYSHNFFCGEPHRCLEVPHIDDRQNCIAGRPDQRPGEQCIEFLHRPPAQCAAHGQ 179
           N   + Y    FC  P+  + + H D   N +   P  +PG   ++F+  PP    A   
Sbjct: 277 NYVPYKYDLKKFC--PYNTVLLDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHT 334

Query: 178 SSPP 167
             PP
Sbjct: 335 FRPP 338



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>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)|
           (AtBRI1) (Brassinosteroid LRR receptor kinase)
          Length = 1196

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG 317
           +++NN L GEIP+ I  L NL     S+N F G
Sbjct: 518 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 550



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>SYD_XYLFA (Q9PCC5) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 589

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +2

Query: 119 TATNSSIAVCHVSVHRRWRRLPVRGTLCRRPVEEFDALLARPLVGASGDAVLPVVDVGHL 298
           T T  + AV H +      R+P    L R+ ++E+ A  A+   GA+G A   +  +G +
Sbjct: 307 TFTPFTDAVAHPNGRVAALRIPSGAVLSRKQIDEYAAYTAK--YGATGLAYAKLAPIGEI 364

Query: 299 QAPV 310
            +P+
Sbjct: 365 TSPI 368



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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 403 NMLAGEIPESICALPNLKNFTYSHNFFCGE 314
           N +AGEIP  I  L NLK+   ++N   GE
Sbjct: 433 NNIAGEIPPEIGKLQNLKDLILNNNQLTGE 462



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>MOS_XENLA (P12965) Serine/threonine-protein kinase mos (EC 2.7.11.1)|
           (pp39-mos)
          Length = 359

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
 Frame = -3

Query: 274 QNCIAGRPDQRP-GEQCIEFLHRPPAQCAAHGQS------SPPPM 161
           Q+C A RP +RP  EQ +E L +  A C     S      +PPP+
Sbjct: 311 QSCWAARPQERPNAEQLLERLEQECAMCTGGPPSCSPESNAPPPL 355



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>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
          Length = 1164

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 406 NNMLAGEIPESICALPNLKNFTYSHNFFCGE 314
           NN+L G +PESI    N+   + S N   GE
Sbjct: 484 NNLLTGSLPESISKCTNMLWISLSSNLLTGE 514



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>Y833_TREPA (O83805) Hypothetical protein TP0833 precursor|
          Length = 240

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -2

Query: 287 HRRPAELHRRTPRPAAWRAVHRIPPPAACTVCRARAIVATADVLIRGRRQYWNL 126
           H     +  RT      R V RI  P A T+   + I   A   +RG R  W+L
Sbjct: 68  HEGVLRVRTRTENAEGTRRVIRIGIPRAQTLAWVKIIATGAHTTVRGVRAVWSL 121



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGEPHRCL----EVPHIDDRQNCIAGR 254
           +V+ N+ +GEIP+    LP LK F    N F G   + L     +  ++ R N ++GR
Sbjct: 250 DVSWNLFSGEIPDVFDELPQLKFFLGQTNGFIGGIPKSLANSPSLNLLNLRNNSLSGR 307



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>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
 Frame = +3

Query: 153  YQYIGGGDDCPCAAHCAGGRWR--NSMHCSPGRW 248
            Y    G D+  C   C   ++R  N  HC P RW
Sbjct: 3617 YDCADGSDEMDCVTECKEDQFRCKNKAHCIPIRW 3650



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>MED14_CAEEL (Q03570) RNA polymerase II mediator complex subunit 14 (Mediator|
           complex subunit rgr-1)
          Length = 1374

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 305 VPGGAPHRRPAELHRRTPRPAAW 237
           VP G PHRR  E   RT + A W
Sbjct: 641 VPHGLPHRRDGEPKDRTSKDATW 663



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>MMGL_RAT (P49301) Macrophage asialoglycoprotein-binding protein (M-ASGP-BP)|
           (Macrophage galactose/N-acetylgalactosamine-specific
           lectin) (MMGL)
          Length = 306

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 132 PVLPSATYQY-IGGGDDCPCAAHCAGGRWRNSMHCSPGRW 248
           P  P   Y + +GGG+DC  A   + GRW + +   P RW
Sbjct: 259 PKQPDNWYGHGLGGGEDC--AHFTSDGRWNDDVCQRPYRW 296



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>J1S_HCMVA (P17144) Hypothetical protein J1S|
          Length = 224

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +3

Query: 204 GGRWRNSMH---CSPGRWSGRPAMQFCRSSMWG 293
           G  W + +H   C+PGR    P ++ CR+S +G
Sbjct: 192 GPEWMSGVHLDGCAPGRRLCAPVVRACRASSFG 224



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>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)|
           (Brassinosteroid LRR receptor kinase)
          Length = 1207

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG----EPHRCLEVPHIDDRQNCIAG 257
           +++NN L+GEIP S+  L NL      +N   G    E   C  +  +D   N + G
Sbjct: 529 SLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNG 585



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>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC|
           2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1)
           (Systemin receptor SR160)
          Length = 1207

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -3

Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG----EPHRCLEVPHIDDRQNCIAG 257
           +++NN L+GEIP S+  L NL      +N   G    E   C  +  +D   N + G
Sbjct: 529 SLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNG 585



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>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 403 NMLAGEIPESICALPNLKNFTYSHNFFCGE 314
           N L G IP+ +  LPNLK    S N   G+
Sbjct: 396 NNLTGMIPQELTTLPNLKTLDVSSNKLFGK 425



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>POL2_BRAV (Q9YK98) RNA2 polyprotein (P2) [Contains: P2A protein; Movement|
           protein (MP); Coat protein (CP)]
          Length = 1626

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 352 KNFTYSHNFFCGEPHRCLEVPHIDDRQNCIAGRPDQRPGEQCIEFLHRP 206
           +N+TY+ +  CG P+  +E    ++R+N I G       +   EFL  P
Sbjct: 440 ENYTYTFSRQCGIPYLLVEGRGAEERKNTILGWDFSLHNDGEFEFLPSP 488



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>KCNKC_HUMAN (Q9HB15) Potassium channel subfamily K member 12 (Tandem pore|
           domain halothane-inhibited potassium channel 2) (THIK-2)
          Length = 430

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 260 RTPRPAAWRAVHRIPPPAACTVCRARA 180
           R+PRP   R+  R+P P+ C  C  R+
Sbjct: 4   RSPRPPPRRSRRRLPRPSCCCCCCRRS 30



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>FLII_MOUSE (Q9JJ28) Protein flightless-1 homolog|
          Length = 1271

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -3

Query: 409 ANNMLAGEIPESICALPNLKNFTYSHNFFCGEP---HRCLEVPHIDDRQN 269
           ANN L   IPES+C  P LK    + N     P   H   E+  +D R+N
Sbjct: 325 ANNNLE-LIPESLCRCPKLKKLVLNKNRLVTLPEAIHFLTEIQVLDVREN 373



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>ASGR1_MOUSE (P34927) Asialoglycoprotein receptor 1 (ASGPR 1) (ASGP-R 1)|
           (Hepatic lectin 1) (MHL-1)
          Length = 283

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 132 PVLPSATYQY-IGGGDDCPCAAHCAGGRWRNSMHCSPGRW 248
           P  P   Y + +GGG+DC  A     GRW + +   P RW
Sbjct: 236 PEQPDNWYGHGLGGGEDC--AHFTTDGRWNDDVCRRPYRW 273



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>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
 Frame = -3

Query: 280  DRQNCIAGRPDQRPGEQCIEFLHRPPAQCAAHGQSSPPPMY*YVADGNTGI-------CS 122
            D+  C    P+Q+PG+ C       P  C+   ++  P      A+G TG+       C 
Sbjct: 1123 DKNTCQCKCPNQKPGDTCGNGKDFCPLDCSCKCKNPKP------ANGCTGVQEWNEEKCQ 1176

Query: 121  CLLPLCREKR 92
            C  P  + K+
Sbjct: 1177 CECPKDKPKK 1186


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,647,283
Number of Sequences: 219361
Number of extensions: 1491499
Number of successful extensions: 4362
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4358
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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