Clone Name | rbart43e03 |
---|---|
Clone Library Name | barley_pub |
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 36.2 bits (82), Expect = 0.031 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE 314 +V+ N+L+GEIP IC LPNL+ + N GE Sbjct: 754 DVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGE 787 Score = 32.7 bits (73), Expect = 0.35 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE 314 +V+NN L+GEIP I L NL N N F G+ Sbjct: 168 DVSNNSLSGEIPPEIGKLSNLSNLYMGLNSFSGQ 201 Score = 28.9 bits (63), Expect = 5.0 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGEPHRCL----EVPHIDDRQNCIAG 257 N+ANN L G IPES L +L + N G L E+ H+D N ++G Sbjct: 658 NLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSG 714 Score = 28.5 bits (62), Expect = 6.6 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -3 Query: 412 VANNMLAGEIPESICALPNLKNFTYSHNFFCG 317 +ANN +GEIP I P LK+ + + N G Sbjct: 336 LANNRFSGEIPHEIEDCPMLKHLSLASNLLSG 367 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG 317 +++NN L+GEIP S+ L NL S N G Sbjct: 610 SLSNNHLSGEIPASLSRLTNLTILDLSGNALTG 642
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 34.7 bits (78), Expect = 0.092 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE 314 N+ANN L+GEIP+ + LP L S N F GE Sbjct: 529 NLANNHLSGEIPKEVGILPVLNYLDLSSNQFSGE 562 Score = 28.9 bits (63), Expect = 5.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 412 VANNMLAGEIPESICALPNLKNFTYSHNFFCG 317 ++NN L+G+IP LP L S N F G Sbjct: 410 LSNNKLSGQIPHGFWGLPRLSLLELSDNSFTG 441 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 Query: 406 NNMLAGEIPESICALPNLKNFTYSHNFFCGE 314 NN +GE+PES+ + LK F S N G+ Sbjct: 269 NNSFSGELPESMGNMTTLKRFDASMNKLTGK 299
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 34.3 bits (77), Expect = 0.12 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE-PHRCLEVPHID 281 ++++N G IP+++ AL NL+N + N G P L +PH++ Sbjct: 122 DLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIGPFPESLLSIPHLE 167
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 33.5 bits (75), Expect = 0.20 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE-----PHRCLEVPHIDDRQNCIAGRP 251 ++++N L+G IP+S+ + + + SHN CG P LE D Q C+ G P Sbjct: 309 DLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQ-CLCGGP 367
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 33.5 bits (75), Expect = 0.20 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Frame = -3 Query: 412 VANNMLAGEIPESICALPNLKNFTYSHNFFCGE-PHRCLEVPHID----DRQNCIAGRPD 248 ++NN +GEIP +I PNL+ N F G P E+ H+ N G PD Sbjct: 463 LSNNWFSGEIPPAIGNFPNLQTLFLDRNRFRGNIPREIFELKHLSRINTSANNITGGIPD 522 Score = 29.3 bits (64), Expect = 3.8 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG----EPHRCLEVPHIDDRQNCIAG 257 +V++N L G IP+ +C L+ S+NFF G E +C + I +N + G Sbjct: 367 DVSDNHLTGLIPKDLCRGEKLEMLILSNNFFFGPIPEELGKCKSLTKIRIVKNLLNG 423
>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)| Length = 3075 Score = 32.7 bits (73), Expect = 0.35 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Frame = +3 Query: 177 DCPCAAHCAGGRWRNSMHCSPGRWS--GRPAMQFCRSSMWGTSRHRC 311 +C C H GG+ C G W Q C S+ G++ HRC Sbjct: 1013 ECVCPPHTQGGKCEE---CEDGHWGYDAEVGCQACNCSLVGSTHHRC 1056
>NID1_MOUSE (P10493) Nidogen-1 precursor (Entactin)| Length = 1245 Score = 31.2 bits (69), Expect = 1.0 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Frame = -3 Query: 304 CLEVPHIDDRQNCIAGRPDQRPGEQCIEFLHR----PPAQCAAHGQSS 173 C+E H DR C+A DQRP C LH AQC G SS Sbjct: 736 CVEGYHFSDRGTCVAAE-DQRPINYCETGLHNCDIPQRAQCIYMGGSS 782
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGE--------PHRCLEVPHIDDRQNCIA 260 ++++N + G +P S+ AL L+ S+N CG H C H C Sbjct: 267 DLSHNRIRGTVPRSLAALSTLQTLDLSYNRLCGPLPRLHGVIRHGCKPYEH----NQCAG 322 Query: 259 GRP 251 G P Sbjct: 323 GAP 325
>HGD_ARATH (Q9ZRA2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 461 Score = 29.6 bits (65), Expect = 2.9 Identities = 17/64 (26%), Positives = 26/64 (40%) Frame = -3 Query: 358 NLKNFTYSHNFFCGEPHRCLEVPHIDDRQNCIAGRPDQRPGEQCIEFLHRPPAQCAAHGQ 179 N + Y FC P+ + + H D N + P +PG ++F+ PP A Sbjct: 277 NYVPYKYDLKKFC--PYNTVLLDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHT 334 Query: 178 SSPP 167 PP Sbjct: 335 FRPP 338
>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)| (AtBRI1) (Brassinosteroid LRR receptor kinase) Length = 1196 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG 317 +++NN L GEIP+ I L NL S+N F G Sbjct: 518 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 550
>SYD_XYLFA (Q9PCC5) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 589 Score = 29.3 bits (64), Expect = 3.8 Identities = 18/64 (28%), Positives = 32/64 (50%) Frame = +2 Query: 119 TATNSSIAVCHVSVHRRWRRLPVRGTLCRRPVEEFDALLARPLVGASGDAVLPVVDVGHL 298 T T + AV H + R+P L R+ ++E+ A A+ GA+G A + +G + Sbjct: 307 TFTPFTDAVAHPNGRVAALRIPSGAVLSRKQIDEYAAYTAK--YGATGLAYAKLAPIGEI 364 Query: 299 QAPV 310 +P+ Sbjct: 365 TSPI 368
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 28.9 bits (63), Expect = 5.0 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -3 Query: 403 NMLAGEIPESICALPNLKNFTYSHNFFCGE 314 N +AGEIP I L NLK+ ++N GE Sbjct: 433 NNIAGEIPPEIGKLQNLKDLILNNNQLTGE 462
>MOS_XENLA (P12965) Serine/threonine-protein kinase mos (EC 2.7.11.1)| (pp39-mos) Length = 359 Score = 28.9 bits (63), Expect = 5.0 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 7/45 (15%) Frame = -3 Query: 274 QNCIAGRPDQRP-GEQCIEFLHRPPAQCAAHGQS------SPPPM 161 Q+C A RP +RP EQ +E L + A C S +PPP+ Sbjct: 311 QSCWAARPQERPNAEQLLERLEQECAMCTGGPPSCSPESNAPPPL 355
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 28.9 bits (63), Expect = 5.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 406 NNMLAGEIPESICALPNLKNFTYSHNFFCGE 314 NN+L G +PESI N+ + S N GE Sbjct: 484 NNLLTGSLPESISKCTNMLWISLSSNLLTGE 514
>Y833_TREPA (O83805) Hypothetical protein TP0833 precursor| Length = 240 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = -2 Query: 287 HRRPAELHRRTPRPAAWRAVHRIPPPAACTVCRARAIVATADVLIRGRRQYWNL 126 H + RT R V RI P A T+ + I A +RG R W+L Sbjct: 68 HEGVLRVRTRTENAEGTRRVIRIGIPRAQTLAWVKIIATGAHTTVRGVRAVWSL 121
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 28.5 bits (62), Expect = 6.6 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCGEPHRCL----EVPHIDDRQNCIAGR 254 +V+ N+ +GEIP+ LP LK F N F G + L + ++ R N ++GR Sbjct: 250 DVSWNLFSGEIPDVFDELPQLKFFLGQTNGFIGGIPKSLANSPSLNLLNLRNNSLSGR 307
>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 28.5 bits (62), Expect = 6.6 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%) Frame = +3 Query: 153 YQYIGGGDDCPCAAHCAGGRWR--NSMHCSPGRW 248 Y G D+ C C ++R N HC P RW Sbjct: 3617 YDCADGSDEMDCVTECKEDQFRCKNKAHCIPIRW 3650
>MED14_CAEEL (Q03570) RNA polymerase II mediator complex subunit 14 (Mediator| complex subunit rgr-1) Length = 1374 Score = 28.5 bits (62), Expect = 6.6 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -2 Query: 305 VPGGAPHRRPAELHRRTPRPAAW 237 VP G PHRR E RT + A W Sbjct: 641 VPHGLPHRRDGEPKDRTSKDATW 663
>MMGL_RAT (P49301) Macrophage asialoglycoprotein-binding protein (M-ASGP-BP)| (Macrophage galactose/N-acetylgalactosamine-specific lectin) (MMGL) Length = 306 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +3 Query: 132 PVLPSATYQY-IGGGDDCPCAAHCAGGRWRNSMHCSPGRW 248 P P Y + +GGG+DC A + GRW + + P RW Sbjct: 259 PKQPDNWYGHGLGGGEDC--AHFTSDGRWNDDVCQRPYRW 296
>J1S_HCMVA (P17144) Hypothetical protein J1S| Length = 224 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = +3 Query: 204 GGRWRNSMH---CSPGRWSGRPAMQFCRSSMWG 293 G W + +H C+PGR P ++ CR+S +G Sbjct: 192 GPEWMSGVHLDGCAPGRRLCAPVVRACRASSFG 224
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG----EPHRCLEVPHIDDRQNCIAG 257 +++NN L+GEIP S+ L NL +N G E C + +D N + G Sbjct: 529 SLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNG 585
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC| 2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = -3 Query: 415 NVANNMLAGEIPESICALPNLKNFTYSHNFFCG----EPHRCLEVPHIDDRQNCIAG 257 +++NN L+GEIP S+ L NL +N G E C + +D N + G Sbjct: 529 SLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNG 585
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -3 Query: 403 NMLAGEIPESICALPNLKNFTYSHNFFCGE 314 N L G IP+ + LPNLK S N G+ Sbjct: 396 NNLTGMIPQELTTLPNLKTLDVSSNKLFGK 425
>POL2_BRAV (Q9YK98) RNA2 polyprotein (P2) [Contains: P2A protein; Movement| protein (MP); Coat protein (CP)] Length = 1626 Score = 28.1 bits (61), Expect = 8.6 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -3 Query: 352 KNFTYSHNFFCGEPHRCLEVPHIDDRQNCIAGRPDQRPGEQCIEFLHRP 206 +N+TY+ + CG P+ +E ++R+N I G + EFL P Sbjct: 440 ENYTYTFSRQCGIPYLLVEGRGAEERKNTILGWDFSLHNDGEFEFLPSP 488
>KCNKC_HUMAN (Q9HB15) Potassium channel subfamily K member 12 (Tandem pore| domain halothane-inhibited potassium channel 2) (THIK-2) Length = 430 Score = 28.1 bits (61), Expect = 8.6 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -2 Query: 260 RTPRPAAWRAVHRIPPPAACTVCRARA 180 R+PRP R+ R+P P+ C C R+ Sbjct: 4 RSPRPPPRRSRRRLPRPSCCCCCCRRS 30
>FLII_MOUSE (Q9JJ28) Protein flightless-1 homolog| Length = 1271 Score = 28.1 bits (61), Expect = 8.6 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3 Query: 409 ANNMLAGEIPESICALPNLKNFTYSHNFFCGEP---HRCLEVPHIDDRQN 269 ANN L IPES+C P LK + N P H E+ +D R+N Sbjct: 325 ANNNLE-LIPESLCRCPKLKKLVLNKNRLVTLPEAIHFLTEIQVLDVREN 373
>ASGR1_MOUSE (P34927) Asialoglycoprotein receptor 1 (ASGPR 1) (ASGP-R 1)| (Hepatic lectin 1) (MHL-1) Length = 283 Score = 28.1 bits (61), Expect = 8.6 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 132 PVLPSATYQY-IGGGDDCPCAAHCAGGRWRNSMHCSPGRW 248 P P Y + +GGG+DC A GRW + + P RW Sbjct: 236 PEQPDNWYGHGLGGGEDC--AHFTTDGRWNDDVCRRPYRW 273
>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor| Length = 1700 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Frame = -3 Query: 280 DRQNCIAGRPDQRPGEQCIEFLHRPPAQCAAHGQSSPPPMY*YVADGNTGI-------CS 122 D+ C P+Q+PG+ C P C+ ++ P A+G TG+ C Sbjct: 1123 DKNTCQCKCPNQKPGDTCGNGKDFCPLDCSCKCKNPKP------ANGCTGVQEWNEEKCQ 1176 Query: 121 CLLPLCREKR 92 C P + K+ Sbjct: 1177 CECPKDKPKK 1186 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,647,283 Number of Sequences: 219361 Number of extensions: 1491499 Number of successful extensions: 4362 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4358 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)