ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart43e01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Plus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4144054 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 4144113 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| |||| Sbjct: 4144114 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgacg 4144173 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 4144174 gtggtgaggc 4144183 Score = 186 bits (94), Expect = 4e-44 Identities = 121/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4121527 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 4121468 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 4121467 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgact 4121408 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 4121407 gtggtgaggc 4121398 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| |||||||||||| ||||||| |||||||| ||||| |||| || ||||||||| Sbjct: 4143919 aatcatccgctgaacggcctgtacaccttgagcgcgtcgatgacgtcagcaatggagccc 4143978 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 4143979 gcggcggcggcgatggagacgacgaggca 4144007 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 298 gcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaagg 357 |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 4892280 gcacgccgcgctgcgcgatgtacatctccgtggggaggtagacggtgagcggccagaagg 4892339 Query: 358 agacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacgg 417 ||| ||| || || || || || | | |||||||||||| ||| |||||||| |||| Sbjct: 4892340 agatggcaccgaggaggccgacgatgacgccgaagaagggcagcgccatggcgaccacgg 4892399 Query: 418 tggtga 423 |||||| Sbjct: 4892400 tggtga 4892405 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| ||||||||||| ||||||| ||||| || ||||| |||| || ||||||||| Sbjct: 4121662 aatcatccgctgaacggtctgtacaccttgagagcgtcgatgacgtcagcaatggagccc 4121603 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 4121602 gcagcggcggcgatggagacgacgaggca 4121574 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 330 gggaagtagacggtgagcggccagaag 356 ||||||||||||| ||||||||||||| Sbjct: 4883390 gggaagtagacggagagcggccagaag 4883364
>dbj|AK105784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G09, full insert sequence Length = 1773 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1368 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1309 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| |||| Sbjct: 1308 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgacg 1249 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 1248 gtggtgaggc 1239 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| |||||||||||| ||||||| |||||||| ||||| |||| || ||||||||| Sbjct: 1503 aatcatccgctgaacggcctgtacaccttgagcgcgtcgatgacgtcagcaatggagccc 1444 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 1443 gcggcggcggcgatggagacgacgaggca 1415
>dbj|AK061470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D07, full insert sequence Length = 1797 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1370 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1311 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| |||| Sbjct: 1310 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgacg 1251 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 1250 gtggtgaggc 1241 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| |||||||||||| ||||||| |||||||| ||||| |||| || ||||||||| Sbjct: 1505 aatcatccgctgaacggcctgtacaccttgagcgcgtcgatgacgtcagcaatggagccc 1446 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 1445 gcggcggcggcgatggagacgacgaggca 1417
>dbj|AK061444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C11, full insert sequence Length = 1662 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1368 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1309 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| |||| Sbjct: 1308 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgacg 1249 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 1248 gtggtgaggc 1239 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| |||||||||||| ||||||| |||||||| ||||| |||| || ||||||||| Sbjct: 1503 aatcatccgctgaacggcctgtacaccttgagcgcgtcgatgacgtcagcaatggagccc 1444 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 1443 gcggcggcggcgatggagacgacgaggca 1415
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Plus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4144041 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 4144100 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| |||| Sbjct: 4144101 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgacg 4144160 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 4144161 gtggtgaggc 4144170 Score = 186 bits (94), Expect = 4e-44 Identities = 121/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4121514 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 4121455 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 4121454 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgact 4121395 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 4121394 gtggtgaggc 4121385 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| |||||||||||| ||||||| |||||||| ||||| |||| || ||||||||| Sbjct: 4143906 aatcatccgctgaacggcctgtacaccttgagcgcgtcgatgacgtcagcaatggagccc 4143965 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 4143966 gcggcggcggcgatggagacgacgaggca 4143994 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 298 gcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaagg 357 |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 4892262 gcacgccgcgctgcgcgatgtacatctccgtggggaggtagacggtgagcggccagaagg 4892321 Query: 358 agacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacgg 417 ||| ||| || || || || || | | |||||||||||| ||| |||||||| |||| Sbjct: 4892322 agatggcaccgaggaggccgacgatgacgccgaagaagggcagcgccatggcgaccacgg 4892381 Query: 418 tggtga 423 |||||| Sbjct: 4892382 tggtga 4892387 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| ||||||||||| ||||||| ||||| || ||||| |||| || ||||||||| Sbjct: 4121649 aatcatccgctgaacggtctgtacaccttgagagcgtcgatgacgtcagcaatggagccc 4121590 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 4121589 gcagcggcggcgatggagacgacgaggca 4121561 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 330 gggaagtagacggtgagcggccagaag 356 ||||||||||||| ||||||||||||| Sbjct: 4883372 gggaagtagacggagagcggccagaag 4883346
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 194 bits (98), Expect = 2e-46 Identities = 122/130 (93%) Strand = Plus / Plus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86450 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 86509 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| |||| Sbjct: 86510 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgacg 86569 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 86570 gtggtgaggc 86579 Score = 186 bits (94), Expect = 4e-44 Identities = 121/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63923 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 63864 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 63863 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgact 63804 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 63803 gtggtgaggc 63794 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| |||||||||||| ||||||| |||||||| ||||| |||| || ||||||||| Sbjct: 86315 aatcatccgctgaacggcctgtacaccttgagcgcgtcgatgacgtcagcaatggagccc 86374 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 86375 gcggcggcggcgatggagacgacgaggca 86403 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| ||||||||||| ||||||| ||||| || ||||| |||| || ||||||||| Sbjct: 64058 aatcatccgctgaacggtctgtacaccttgagagcgtcgatgacgtcagcaatggagccc 63999 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 63998 gcagcggcggcgatggagacgacgaggca 63970
>dbj|AK106090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B07, full insert sequence Length = 1715 Score = 186 bits (94), Expect = 4e-44 Identities = 121/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1390 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1331 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1330 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgact 1271 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 1270 gtggtgaggc 1261 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| ||||||||||| ||||||| ||||| || ||||| |||| || ||||||||| Sbjct: 1525 aatcatccgctgaacggtctgtacaccttgagagcgtcgatgacgtcagcaatggagccc 1466 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 1465 gcagcggcggcgatggagacgacgaggca 1437
>dbj|AK099164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O03, full insert sequence Length = 1709 Score = 186 bits (94), Expect = 4e-44 Identities = 121/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1393 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1334 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1333 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgact 1274 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 1273 gtggtgaggc 1264 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| ||||||||||| ||||||| ||||| || ||||| |||| || ||||||||| Sbjct: 1528 aatcatccgctgaacggtctgtacaccttgagagcgtcgatgacgtcagcaatggagccc 1469 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 1468 gcagcggcggcgatggagacgacgaggca 1440
>dbj|AK061448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E03, full insert sequence Length = 1725 Score = 186 bits (94), Expect = 4e-44 Identities = 121/130 (93%) Strand = Plus / Minus Query: 297 ggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 ggcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1332 Query: 357 gagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacg 416 |||||||| || || || |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1331 gagacggcgccgaggagacccaccacgttgccgaagaaggggaggagcatggcgacgact 1272 Query: 417 gtggtgaggc 426 |||||||||| Sbjct: 1271 gtggtgaggc 1262 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 162 aatcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagccc 221 ||||| ||||||||||| ||||||| ||||| || ||||| |||| || ||||||||| Sbjct: 1526 aatcatccgctgaacggtctgtacaccttgagagcgtcgatgacgtcagcaatggagccc 1467 Query: 222 gctgcggcggcgatggacacgatgaggca 250 || |||||||||||||| |||| |||||| Sbjct: 1466 gcagcggcggcgatggagacgacgaggca 1438
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 180 bits (91), Expect = 2e-42 Identities = 214/255 (83%) Strand = Plus / Plus Query: 168 ccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagcccgctgcg 227 |||||||||||| |||||| |||||||| |||| |||| |||||||||||| || ||| Sbjct: 60318 ccgctgaacggccggtacaccttgagcgcgtcgaccacgtcggcgatggagccggcggcg 60377 Query: 228 gcggcgatggacacgatgaggcatccgacgctgagcatcctaaggcagatcccctgcgtg 287 ||||||| ||| |||| |||||| || ||||||| | | | ||||||| || | ||| | Sbjct: 60378 gcggcgacggagacgacgaggcaggcggcgctgaggaccttgaggcagagccaccgcgcg 60437 Query: 288 ctcctcccgggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagc 347 |||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 60438 ctccctcgccgcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagc 60497 Query: 348 ggccagaaggagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatg 407 |||||||| |||||||| || || || |||||||||| ||||||||| ||||| |||||| Sbjct: 60498 ggccagaacgagacggcgccgaggagccccaccacgtcgccgaagaacgggaggagcatg 60557 Query: 408 gcgaagacggtggtg 422 | | |||||||||| Sbjct: 60558 gacacgacggtggtg 60572
>gb|BT009014.1| Triticum aestivum clone wdk3c.pk006.d6:fis, full insert mRNA sequence Length = 1785 Score = 180 bits (91), Expect = 2e-42 Identities = 220/263 (83%) Strand = Plus / Minus Query: 164 tcagccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagcccgc 223 |||||||||||||||| |||| | |||||| | |||| |||| ||| ||||| || || Sbjct: 1539 tcagccgctgaacggccggtactccttgagctcgccgatgacgtcggcaatggacccggc 1480 Query: 224 tgcggcggcgatggacacgatgaggcatccgacgctgagcatcctaaggcagatcccctg 283 |||||||| | |||||||| |||||| || ||||||||||| ||||| | || | | Sbjct: 1479 cgcggcggccacggacacgacgaggcaggcggcgctgagcatctggaggcaaacccaccg 1420 Query: 284 cgtgctcctcccgggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggt 343 |||||||| || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1419 cgtgctcccccgtcgcacgccgcgctgcacgatgtacatctcgacggggaagtagacggt 1360 Query: 344 gagcggccagaaggagacggctcccagaagtcccaccacgttgccgaagaaggggagcag 403 ||| |||||||| | |||||| ||||| || ||||| |||| ||| |||||||||||||| Sbjct: 1359 gagtggccagaacgcgacggcgcccaggagccccacgacgtcgccaaagaaggggagcag 1300 Query: 404 catggcgaagacggtggtgaggc 426 ||||| || |||||||||||||| Sbjct: 1299 catggagacgacggtggtgaggc 1277
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 180 bits (91), Expect = 2e-42 Identities = 214/255 (83%) Strand = Plus / Minus Query: 168 ccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagcccgctgcg 227 |||||||||||| |||||| |||||||| |||| |||| |||||||||||| || ||| Sbjct: 4771356 ccgctgaacggccggtacaccttgagcgcgtcgaccacgtcggcgatggagccggcggcg 4771297 Query: 228 gcggcgatggacacgatgaggcatccgacgctgagcatcctaaggcagatcccctgcgtg 287 ||||||| ||| |||| |||||| || ||||||| | | | ||||||| || | ||| | Sbjct: 4771296 gcggcgacggagacgacgaggcaggcggcgctgaggaccttgaggcagagccaccgcgcg 4771237 Query: 288 ctcctcccgggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagc 347 |||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4771236 ctccctcgccgcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagc 4771177 Query: 348 ggccagaaggagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatg 407 |||||||| |||||||| || || || |||||||||| ||||||||| ||||| |||||| Sbjct: 4771176 ggccagaacgagacggcgccgaggagccccaccacgtcgccgaagaacgggaggagcatg 4771117 Query: 408 gcgaagacggtggtg 422 | | |||||||||| Sbjct: 4771116 gacacgacggtggtg 4771102
>dbj|AK104370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E06, full insert sequence Length = 1707 Score = 180 bits (91), Expect = 2e-42 Identities = 214/255 (83%) Strand = Plus / Minus Query: 168 ccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagcccgctgcg 227 |||||||||||| |||||| |||||||| |||| |||| |||||||||||| || ||| Sbjct: 1542 ccgctgaacggccggtacaccttgagcgcgtcgaccacgtcggcgatggagccggcggcg 1483 Query: 228 gcggcgatggacacgatgaggcatccgacgctgagcatcctaaggcagatcccctgcgtg 287 ||||||| ||| |||| |||||| || ||||||| | | | ||||||| || | ||| | Sbjct: 1482 gcggcgacggagacgacgaggcaggcggcgctgaggaccttgaggcagagccaccgcgcg 1423 Query: 288 ctcctcccgggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagc 347 |||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1422 ctccctcgccgcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagc 1363 Query: 348 ggccagaaggagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatg 407 |||||||| |||||||| || || || |||||||||| ||||||||| ||||| |||||| Sbjct: 1362 ggccagaacgagacggcgccgaggagccccaccacgtcgccgaagaacgggaggagcatg 1303 Query: 408 gcgaagacggtggtg 422 | | |||||||||| Sbjct: 1302 gacacgacggtggtg 1288
>dbj|AK068003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H02, full insert sequence Length = 1781 Score = 180 bits (91), Expect = 2e-42 Identities = 214/255 (83%) Strand = Plus / Minus Query: 168 ccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagcccgctgcg 227 |||||||||||| |||||| |||||||| |||| |||| |||||||||||| || ||| Sbjct: 1529 ccgctgaacggccggtacaccttgagcgcgtcgaccacgtcggcgatggagccggcggcg 1470 Query: 228 gcggcgatggacacgatgaggcatccgacgctgagcatcctaaggcagatcccctgcgtg 287 ||||||| ||| |||| |||||| || ||||||| | | | ||||||| || | ||| | Sbjct: 1469 gcggcgacggagacgacgaggcaggcggcgctgaggaccttgaggcagagccaccgcgcg 1410 Query: 288 ctcctcccgggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagc 347 |||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1409 ctccctcgccgcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagc 1350 Query: 348 ggccagaaggagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatg 407 |||||||| |||||||| || || || |||||||||| ||||||||| ||||| |||||| Sbjct: 1349 ggccagaacgagacggcgccgaggagccccaccacgtcgccgaagaacgggaggagcatg 1290 Query: 408 gcgaagacggtggtg 422 | | |||||||||| Sbjct: 1289 gacacgacggtggtg 1275
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 180 bits (91), Expect = 2e-42 Identities = 214/255 (83%) Strand = Plus / Minus Query: 168 ccgctgaacggcttgtacactttgagcgcttcgataacgttggcgatggagcccgctgcg 227 |||||||||||| |||||| |||||||| |||| |||| |||||||||||| || ||| Sbjct: 4790140 ccgctgaacggccggtacaccttgagcgcgtcgaccacgtcggcgatggagccggcggcg 4790081 Query: 228 gcggcgatggacacgatgaggcatccgacgctgagcatcctaaggcagatcccctgcgtg 287 ||||||| ||| |||| |||||| || ||||||| | | | ||||||| || | ||| | Sbjct: 4790080 gcggcgacggagacgacgaggcaggcggcgctgaggaccttgaggcagagccaccgcgcg 4790021 Query: 288 ctcctcccgggcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagc 347 |||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4790020 ctccctcgccgcacgccgcgctgcgcgatgtacatctcgacggggaagtagacggtgagc 4789961 Query: 348 ggccagaaggagacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatg 407 |||||||| |||||||| || || || |||||||||| ||||||||| ||||| |||||| Sbjct: 4789960 ggccagaacgagacggcgccgaggagccccaccacgtcgccgaagaacgggaggagcatg 4789901 Query: 408 gcgaagacggtggtg 422 | | |||||||||| Sbjct: 4789900 gacacgacggtggtg 4789886
>ref|XM_472988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 93.7 bits (47), Expect = 4e-16 Identities = 122/147 (82%) Strand = Plus / Minus Query: 209 ggcgatggagcccgctgcggcggcgatggacacgatgaggcatccgacgctgagcatcct 268 ||||||||| ||||| | |||||||| |||||||| |||||| ||| |||||||| | Sbjct: 1416 ggcgatggatcccgccgaggcggcgacggacacgacgaggcacccggcgctgagcgcctg 1357 Query: 269 aaggcagatcccctgcgtgctcctcccgggcacgccgcgctgcctgatgtacatctcgac 328 ||| | | || ||||| ||||| || ||||| | ||||||| |||||||||||| || Sbjct: 1356 gagggacagccactgcgcgctcccccgcggcacccggcgctgcgcgatgtacatctccac 1297 Query: 329 ggggaagtagacggtgagcggccagaa 355 ||||||||||||||||||||||||||| Sbjct: 1296 ggggaagtagacggtgagcggccagaa 1270
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 93.7 bits (47), Expect = 4e-16 Identities = 122/147 (82%) Strand = Plus / Minus Query: 209 ggcgatggagcccgctgcggcggcgatggacacgatgaggcatccgacgctgagcatcct 268 ||||||||| ||||| | |||||||| |||||||| |||||| ||| |||||||| | Sbjct: 71071 ggcgatggatcccgccgaggcggcgacggacacgacgaggcacccggcgctgagcgcctg 71012 Query: 269 aaggcagatcccctgcgtgctcctcccgggcacgccgcgctgcctgatgtacatctcgac 328 ||| | | || ||||| ||||| || ||||| | ||||||| |||||||||||| || Sbjct: 71011 gagggacagccactgcgcgctcccccgcggcacccggcgctgcgcgatgtacatctccac 70952 Query: 329 ggggaagtagacggtgagcggccagaa 355 ||||||||||||||||||||||||||| Sbjct: 70951 ggggaagtagacggtgagcggccagaa 70925
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 4e-16 Identities = 122/147 (82%) Strand = Plus / Minus Query: 209 ggcgatggagcccgctgcggcggcgatggacacgatgaggcatccgacgctgagcatcct 268 ||||||||| ||||| | |||||||| |||||||| |||||| ||| |||||||| | Sbjct: 24511440 ggcgatggatcccgccgaggcggcgacggacacgacgaggcacccggcgctgagcgcctg 24511381 Query: 269 aaggcagatcccctgcgtgctcctcccgggcacgccgcgctgcctgatgtacatctcgac 328 ||| | | || ||||| ||||| || ||||| | ||||||| |||||||||||| || Sbjct: 24511380 gagggacagccactgcgcgctcccccgcggcacccggcgctgcgcgatgtacatctccac 24511321 Query: 329 ggggaagtagacggtgagcggccagaa 355 ||||||||||||||||||||||||||| Sbjct: 24511320 ggggaagtagacggtgagcggccagaa 24511294 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||| ||||||||||||| || ||||||||||||| Sbjct: 23488625 gtacatctccacggggaagtagatggcgagcggccagaag 23488664 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 33697710 gtacatctcgacggggaggtagatggcgagcggccagaa 33697672
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 93.7 bits (47), Expect = 4e-16 Identities = 122/147 (82%) Strand = Plus / Minus Query: 209 ggcgatggagcccgctgcggcggcgatggacacgatgaggcatccgacgctgagcatcct 268 ||||||||| ||||| | |||||||| |||||||| |||||| ||| |||||||| | Sbjct: 104762 ggcgatggatcccgccgaggcggcgacggacacgacgaggcacccggcgctgagcgcctg 104703 Query: 269 aaggcagatcccctgcgtgctcctcccgggcacgccgcgctgcctgatgtacatctcgac 328 ||| | | || ||||| ||||| || ||||| | ||||||| |||||||||||| || Sbjct: 104702 gagggacagccactgcgcgctcccccgcggcacccggcgctgcgcgatgtacatctccac 104643 Query: 329 ggggaagtagacggtgagcggccagaa 355 ||||||||||||||||||||||||||| Sbjct: 104642 ggggaagtagacggtgagcggccagaa 104616
>ref|XM_476538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1399 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 1350
>ref|XM_476539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 1225
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1821497 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 1821546
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 26076 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 26125
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 73716 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 73765
>dbj|AK120257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046A03, full insert sequence Length = 1870 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1401 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 1352
>dbj|AK106110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D09, full insert sequence Length = 1708 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1399 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 1350
>dbj|AK103862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149D13, full insert sequence Length = 1774 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1273 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 1224
>dbj|AK058572.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E09, full insert sequence Length = 714 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 420 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggc 371
>ref|XM_463785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1814 Score = 89.7 bits (45), Expect = 7e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaaggagacggctcccagaag 373 ||||||||||||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 1503 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 1444 Query: 374 tcccaccacgttgccgaagaaggggagcagcat 406 |||||||||| | ||||||||| |||||||| Sbjct: 1443 gcccaccacgtcgttgaagaagggcagcagcat 1411
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 7e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaaggagacggctcccagaag 373 ||||||||||||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 121373 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 121314 Query: 374 tcccaccacgttgccgaagaaggggagcagcat 406 |||||||||| | ||||||||| |||||||| Sbjct: 121313 gcccaccacgtcgttgaagaagggcagcagcat 121281 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 375 cccaccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||||||||| ||||| |||||||||| ||||||||||||| Sbjct: 28592375 cccaccacgttgccgaagaaagggaggagcatggcgacaacggtggtgaggc 28592426 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaagg 357 |||||||||||||||||||| || || ||||||||||||| Sbjct: 30016281 gtacatctcgacggggaagtggatggacagcggccagaagg 30016241
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 89.7 bits (45), Expect = 7e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaaggagacggctcccagaag 373 ||||||||||||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 115982 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 115923 Query: 374 tcccaccacgttgccgaagaaggggagcagcat 406 |||||||||| | ||||||||| |||||||| Sbjct: 115922 gcccaccacgtcgttgaagaagggcagcagcat 115890
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 89.7 bits (45), Expect = 7e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaaggagacggctcccagaag 373 ||||||||||||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 70400 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 70341 Query: 374 tcccaccacgttgccgaagaaggggagcagcat 406 |||||||||| | ||||||||| |||||||| Sbjct: 70340 gcccaccacgtcgttgaagaagggcagcagcat 70308
>dbj|AK060685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G03, full insert sequence Length = 1835 Score = 89.7 bits (45), Expect = 7e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaaggagacggctcccagaag 373 ||||||||||||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 1524 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 1465 Query: 374 tcccaccacgttgccgaagaaggggagcagcat 406 |||||||||| | ||||||||| |||||||| Sbjct: 1464 gcccaccacgtcgttgaagaagggcagcagcat 1432
>gb|BT009124.1| Triticum aestivum clone wl1n.pk0014.c11:fis, full insert mRNA sequence Length = 1376 Score = 83.8 bits (42), Expect = 4e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 315 atgtacatctcgacggggaagtagacggtgagcggccagaaggagacggc 364 |||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 780 atgtacatctggatggggaagtagacggtgagcggccagaaggagacggc 731
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 83.8 bits (42), Expect = 4e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 306 cgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 20865670 cgctgccggatgtacatctcgacggggaagaagacggtgagcggccagaa 20865621 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaa 355 |||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 6693553 gatgtacatctccacggggaagtacacggtgagcggccagaa 6693594 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Minus Query: 306 cgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||| |||||||||||| || ||| |||| || || ||||||||||| Sbjct: 20843730 cgctgccggatgtacatctccaccgggtagtacaccgtcagcggccagaa 20843681
>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E11 Length = 148798 Score = 83.8 bits (42), Expect = 4e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 306 cgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 120345 cgctgccggatgtacatctcgacggggaagaagacggtgagcggccagaa 120296 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Minus Query: 306 cgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||| |||||||||||| || ||| |||| || || ||||||||||| Sbjct: 98405 cgctgccggatgtacatctccaccgggtagtacaccgtcagcggccagaa 98356
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 298 gcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaagg 357 |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 46142 gcacgccgcgctgcgcgatgtacatctccgtggggaggtagacggtgagcggccagaagg 46083 Query: 358 agacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacgg 417 ||| ||| || || || || || | | |||||||||||| ||| |||||||| |||| Sbjct: 46082 agatggcaccgaggaggccgacgatgacgccgaagaagggcagcgccatggcgaccacgg 46023 Query: 418 tggtga 423 |||||| Sbjct: 46022 tggtga 46017 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 330 gggaagtagacggtgagcggccagaag 356 ||||||||||||| ||||||||||||| Sbjct: 55032 gggaagtagacggagagcggccagaag 55058
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 298 gcacgccgcgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaagg 357 |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 67679 gcacgccgcgctgcgcgatgtacatctccgtggggaggtagacggtgagcggccagaagg 67620 Query: 358 agacggctcccagaagtcccaccacgttgccgaagaaggggagcagcatggcgaagacgg 417 ||| ||| || || || || || | | |||||||||||| ||| |||||||| |||| Sbjct: 67619 agatggcaccgaggaggccgacgatgacgccgaagaagggcagcgccatggcgaccacgg 67560 Query: 418 tggtga 423 |||||| Sbjct: 67559 tggtga 67554 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 330 gggaagtagacggtgagcggccagaag 356 ||||||||||||| ||||||||||||| Sbjct: 76569 gggaagtagacggagagcggccagaag 76595
>ref|XM_463528.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 209 ggcgatggagcccgctgcggcggcgatggacacgatgaggcatccgacgctgagcatc 266 ||||||||||||||| |||||||||||||| | || |||||| ||||||||||||||| Sbjct: 1419 ggcgatggagcccgcggcggcggcgatggagatgacgaggcagccgacgctgagcatc 1362 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 1311 gtacatctccacggggaagtagacggtgagcggccagaa 1273
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 209 ggcgatggagcccgctgcggcggcgatggacacgatgaggcatccgacgctgagcatc 266 ||||||||||||||| |||||||||||||| | || |||||| ||||||||||||||| Sbjct: 38304125 ggcgatggagcccgcggcggcggcgatggagatgacgaggcagccgacgctgagcatc 38304182 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 375 cccaccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||||||||| || || |||||||||| |||||||||||||| Sbjct: 24550951 cccaccacgttgccgaagaaaggaaggagcatggcgacgacggtggtgaggc 24551002 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 38304233 gtacatctccacggggaagtagacggtgagcggccagaa 38304271
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 209 ggcgatggagcccgctgcggcggcgatggacacgatgaggcatccgacgctgagcatc 266 ||||||||||||||| |||||||||||||| | || |||||| ||||||||||||||| Sbjct: 64950 ggcgatggagcccgcggcggcggcgatggagatgacgaggcagccgacgctgagcatc 65007 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 65058 gtacatctccacggggaagtagacggtgagcggccagaa 65096
>dbj|AK059325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A01, full insert sequence Length = 1858 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 209 ggcgatggagcccgctgcggcggcgatggacacgatgaggcatccgacgctgagcatc 266 ||||||||||||||| |||||||||||||| | || |||||| ||||||||||||||| Sbjct: 1579 ggcgatggagcccgcggcggcggcgatggagatgacgaggcagccgacgctgagcatc 1522 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 1471 gtacatctccacggggaagtagacggtgagcggccagaa 1433
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 375 cccaccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||| ||||| ||||| |||||||||| |||||||||||||| Sbjct: 24439437 cccaccacgttgcccaagaaagggaggagcatggcgatgacggtggtgaggc 24439386 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 375 cccaccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||||||||| | ||| |||||||||| |||||||||||||| Sbjct: 19874093 cccaccacgttgccgaagaaagagaggagcatggcgacgacggtggtgaggc 19874144
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 375 cccaccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||||||||| | ||| |||||||||| |||||||||||||| Sbjct: 42271 cccaccacgttgccgaagaaagagaggagcatggcgacgacggtggtgaggc 42322
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 375 cccaccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||||||||| ||||| |||||||||| ||||||||||||| Sbjct: 56388 cccaccacgttgccgaagaaagggaggagcatggcgacaacggtggtgaggc 56439
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 375 cccaccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||||||||| || || |||||||||| |||||||||||||| Sbjct: 131335 cccaccacgttgccgaagaaaggaaggagcatggcgacgacggtggtgaggc 131386
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 375 cccaccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||| ||||| ||||| |||||||||| |||||||||||||| Sbjct: 55153 cccaccacgttgcccaagaaagggaggagcatggcgatgacggtggtgaggc 55102
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaa 355 |||||||||||| || |||||||||||||||||||||||||| Sbjct: 58551 gatgtacatctccaccgggaagtagacggtgagcggccagaa 58510
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaa 355 |||||||||||| || |||||||||||||||||||||||||| Sbjct: 20636511 gatgtacatctccaccgggaagtagacggtgagcggccagaa 20636470
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaa 355 |||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 127679 gatgtacatctccacggggaagtacacggtgagcggccagaa 127720
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaa 355 |||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 23232 gatgtacatctccacggggaagtacacggtgagcggccagaa 23273
>dbj|AK106762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E07, full insert sequence Length = 1726 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaa 355 |||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1427 gatgtacatctccacggggaagtacacggtgagcggccagaa 1386
>dbj|AK065891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D15, full insert sequence Length = 1975 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 314 gatgtacatctcgacggggaagtagacggtgagcggccagaa 355 |||||||||||| || |||||||||||||||||||||||||| Sbjct: 1449 gatgtacatctccaccgggaagtagacggtgagcggccagaa 1408
>ref|NM_192806.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2439 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 379 ccacgttgccgaagaaggggagcagcatggcgaagacggtggtgaggc 426 |||||||||||||||| || || |||||||||| |||||||||||||| Sbjct: 803 ccacgttgccgaagaaaggaaggagcatggcgacgacggtggtgaggc 756
>ref|XM_472826.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||| ||||||||||||| || ||||||||||||| Sbjct: 1266 gtacatctccacggggaagtagatggcgagcggccagaag 1227
>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full insert sequence Length = 1809 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||| ||||||||||||| || ||||||||||||| Sbjct: 1374 gtacatctccacggggaagtagatggcgagcggccagaag 1335
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaag 356 ||||||||| ||||||||||||| || ||||||||||||| Sbjct: 44528 gtacatctccacggggaagtagatggcgagcggccagaag 44567
>ref|XM_474206.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 1275 gtacatctcgacggggaggtagatggcgagcggccagaa 1237
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 128770 gtacatctcgacggggaggtagatggcgagcggccagaa 128732
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 48153 gtacatctcgacggggaggtagatggcgagcggccagaa 48115
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 128888 gtacatctcgacggggaggtagatggcgagcggccagaa 128850
>ref|XM_467533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaagg 357 |||||||||||||||||||| || || ||||||||||||| Sbjct: 1226 gtacatctcgacggggaagtggatggacagcggccagaagg 1186
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaagg 357 |||||||||||||||||||| || || ||||||||||||| Sbjct: 116557 gtacatctcgacggggaagtggatggacagcggccagaagg 116517
>dbj|AK070030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N07, full insert sequence Length = 1506 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 317 gtacatctcgacggggaagtagacggtgagcggccagaagg 357 |||||||||||||||||||| || || ||||||||||||| Sbjct: 1226 gtacatctcgacggggaagtggatggacagcggccagaagg 1186
>gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, complete sequence Length = 190018 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 79 ctacttcctttgtatgtaaataattat 105 |||||||||||||||||| |||||||| Sbjct: 127562 ctacttcctttgtatgtacataattat 127588
>emb|BX571879.8| Zebrafish DNA sequence from clone DKEY-238C7 in linkage group 18, complete sequence Length = 252198 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 92 atgtaaataattatagttgtttt 114 ||||||||||||||||||||||| Sbjct: 233709 atgtaaataattatagttgtttt 233687
>dbj|AK069508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020L23, full insert sequence Length = 1819 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 330 gggaagtagacggtgagcggccagaag 356 ||||||||||||| ||||||||||||| Sbjct: 1324 gggaagtagacggagagcggccagaag 1298
>emb|CR318588.10| Zebrafish DNA sequence from clone DKEYP-1H4 in linkage group 18, complete sequence Length = 179350 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 92 atgtaaataattatagttgtttt 114 ||||||||||||||||||||||| Sbjct: 71224 atgtaaataattatagttgtttt 71202
>gb|AF339024.1| Fragaria x ananassa pectate lyase B gene, partial cds Length = 5368 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 aaataattatagttgttttcaa 117 |||||||||||||||||||||| Sbjct: 2672 aaataattatagttgttttcaa 2693
>dbj|AK102763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D14, full insert sequence Length = 1890 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Minus Query: 306 cgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||| |||||||||||| || ||| |||| || || ||||||||||| Sbjct: 1406 cgctgccggatgtacatctccaccgggtagtacaccgtcagcggccagaa 1357
>dbj|AK058304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H01, full insert sequence Length = 1823 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Minus Query: 306 cgctgcctgatgtacatctcgacggggaagtagacggtgagcggccagaa 355 ||||||| |||||||||||| || ||| |||| || || ||||||||||| Sbjct: 1403 cgctgccggatgtacatctccaccgggtagtacaccgtcagcggccagaa 1354
>emb|AL442645.8| Human DNA sequence from clone RP11-348N20 on chromosome 9 Contains the 3' end of a novel gene (KIAA1616) and a CpG island, complete sequence Length = 150684 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gaagaaggggagcagcatggc 409 ||||||||||||||||||||| Sbjct: 143885 gaagaaggggagcagcatggc 143865
>emb|BX470068.7| Zebrafish DNA sequence from clone CH211-219C8 in linkage group 1, complete sequence Length = 210511 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 92 atgtaaataattatagttgttttcaacta 120 ||||||||| |||||||||||||||||| Sbjct: 110697 atgtaaatatctatagttgttttcaacta 110669
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ggtgtatgtaatgtatgtat 63 |||||||||||||||||||| Sbjct: 37186 ggtgtatgtaatgtatgtat 37167
>gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete sequence Length = 191467 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 taaataattatagttgtttt 114 |||||||||||||||||||| Sbjct: 14638 taaataattatagttgtttt 14657
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ggtgtatgtaatgtatgtat 63 |||||||||||||||||||| Sbjct: 26389146 ggtgtatgtaatgtatgtat 26389127
>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete sequence Length = 134728 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggtgtatgtaatgtatgtat 63 |||||||||||||||||||| Sbjct: 1494 ggtgtatgtaatgtatgtat 1513
>emb|AL139404.9| Human DNA sequence from clone RP11-376D11 on chromosome 10 Contains the 5' end of the SSH3BP gene for spectrin SH3 domain binding protein 1, complete sequence Length = 122913 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tacttcctttgtatgtaaat 99 |||||||||||||||||||| Sbjct: 19602 tacttcctttgtatgtaaat 19583
>gb|AC092366.3| Homo sapiens chromosome 5 clone RP11-461C13, complete sequence Length = 158230 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ttataactacttcctttgtatgta 96 |||||||||||| ||||||||||| Sbjct: 85939 ttataactactttctttgtatgta 85962
>gb|AC099019.1| Drosophila melanogaster, chromosome 2R, region 58C-58D, BAC clone BACR02O12, complete sequence Length = 171594 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 taaataattatagttgtttt 114 |||||||||||||||||||| Sbjct: 3898 taaataattatagttgtttt 3879
>tpg|BK004878.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) growth-regulating factor 9 (GRF9) gene, complete cds Length = 5610 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ggtgtatgtaatgtatgtat 63 |||||||||||||||||||| Sbjct: 2686 ggtgtatgtaatgtatgtat 2667
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ggtgtatgtaatgtatgtat 63 |||||||||||||||||||| Sbjct: 26480455 ggtgtatgtaatgtatgtat 26480436
>gb|AC149155.3| Xenopus tropicalis clone ISB-242B17, complete sequence Length = 94528 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tatgtaatgtatgtattgca 67 |||||||||||||||||||| Sbjct: 52715 tatgtaatgtatgtattgca 52696
>gb|AC016595.4| Homo sapiens chromosome 5 clone CTD-2012M11, complete sequence Length = 131484 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 aagaaggggagcagcatggc 409 |||||||||||||||||||| Sbjct: 72001 aagaaggggagcagcatggc 72020
>gb|AC008873.4|AC008873 Homo sapiens chromosome 5 clone CTD-2199H11, complete sequence Length = 170358 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ttataactacttcctttgtatgta 96 |||||||||||| ||||||||||| Sbjct: 162689 ttataactactttctttgtatgta 162712
>emb|AJ489921.1|SMA489921 Sebaea madagascariensis nuclear ITS1, 5.8S rRNA gene and ITS2, specimen voucher Piso, Wohlhauser, Zeltner M018 (NEU) Length = 632 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 cgtgctcctcccgggcacgccgcg 307 ||||||||||||| |||||||||| Sbjct: 211 cgtgctcctcccgcgcacgccgcg 188
>emb|AL645755.20| Zebrafish DNA sequence from clone RP71-1N18 in linkage group 22, complete sequence Length = 141779 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ggtgtatgtaatgtatgtat 63 |||||||||||||||||||| Sbjct: 40289 ggtgtatgtaatgtatgtat 40270
>emb|CR388051.22| Zebrafish DNA sequence from clone CH211-239B6 in linkage group 15, complete sequence Length = 120027 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gtgtatgtaatgtatgtatt 64 |||||||||||||||||||| Sbjct: 131 gtgtatgtaatgtatgtatt 150
>gb|AE003456.3| Drosophila melanogaster chromosome 2R, section 64 of 73 of the complete sequence Length = 288451 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 taaataattatagttgtttt 114 |||||||||||||||||||| Sbjct: 244328 taaataattatagttgtttt 244347
>gb|AC004252.1|AC004252 Drosophila melanogaster (P1 DS09121 (D88)) DNA sequence, complete sequence Length = 59498 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 taaataattatagttgtttt 114 |||||||||||||||||||| Sbjct: 52020 taaataattatagttgtttt 52001
>emb|CR524482.18| Zebrafish DNA sequence from clone DKEY-109F24 in linkage group 15, complete sequence Length = 125769 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gtgtatgtaatgtatgtatt 64 |||||||||||||||||||| Sbjct: 123900 gtgtatgtaatgtatgtatt 123919
>gb|AC154884.15| Mus musculus chromosome 3, clone RP23-145H17, complete sequence Length = 231400 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ctgagcatcctaaggcagat 277 |||||||||||||||||||| Sbjct: 15259 ctgagcatcctaaggcagat 15240
>emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on chromosome X, complete sequence Length = 197346 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aggttcaacaagggcctttc 29 |||||||||||||||||||| Sbjct: 71543 aggttcaacaagggcctttc 71524
>gb|M26533.1|RATRSKG5 R.norvegicus tonin (RSKG-5) gene, complete cds Length = 15433 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cagatcccctgcgtgctcct 292 |||||||||||||||||||| Sbjct: 11382 cagatcccctgcgtgctcct 11401 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,062,584 Number of Sequences: 3902068 Number of extensions: 3062584 Number of successful extensions: 64128 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63448 Number of HSP's gapped (non-prelim): 675 length of query: 426 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 404 effective length of database: 17,147,199,772 effective search space: 6927468707888 effective search space used: 6927468707888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
