>CD2A2_RAT (Q8QZZ9) Cyclin-dependent kinase inhibitor 2A, isoform 2 (p19ARF)|
          Length = 160

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 64  QIRTPYHPFRSNAKRRANELKQESTSTVP 150
           ++R P+HP  + A+R A  L + S ST P
Sbjct: 84  ELRGPHHPLPTGARRSAGGLPRHSGSTAP 112

>APOH_CANFA (P33703) Beta-2-glycoprotein 1 precursor (Beta-2-glycoprotein I)|
           (Apolipoprotein H) (Apo-H) (B2GPI) (Beta(2)GPI)
          Length = 345

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 165 YWCGDGNCRRGLLFQFVSPALGI*PERVIRC 73
           Y C  G   RGL  +F  P  G+ P   +RC
Sbjct: 49  YTCQPGYVFRGLTRRFTCPLTGVWPTNTVRC 79

>TOM1_ASHGO (Q756G2) Probable E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-)|
          Length = 3258

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 6/32 (18%)
 Frame = -3

Query: 192 SLQCFGRKLYWCGD------GNCRRGLLFQFV 115
           +L+C   K  WC D      GN   GLLFQ +
Sbjct: 350 ALECISLKHVWCSDIVRNLGGNMSHGLLFQIL 381

>TOM1_YEAST (Q03280) E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-)|
           (Temperature-dependent organization in mitotic nucleus
           protein 1) (Suppressor of snRNA protein 2)
          Length = 3268

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 6/32 (18%)
 Frame = -3

Query: 192 SLQCFGRKLYWCGD------GNCRRGLLFQFV 115
           +L+C   K  WC D      GN   GLLFQ +
Sbjct: 351 TLECISLKHVWCSDIIRNLGGNISHGLLFQIL 382


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,346,750
Number of Sequences: 219361
Number of extensions: 486998
Number of successful extensions: 1365
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)