>HMCS2_PIG (O02734) Hydroxymethylglutaryl-CoA synthase, mitochondrial|
           precursor (EC 2.3.3.10) (HMG-CoA synthase)
           (3-hydroxy-3-methylglutaryl coenzyme A synthase)
          Length = 508

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 21  NLKCSCIYKCLESMLSQCCLSCAEFTPIGCFALGS 125
           N+  S +Y CL S+LSQC       + IG F+ GS
Sbjct: 380 NMYTSSLYGCLASLLSQCSAQDLAGSRIGAFSYGS 414

>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3075

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -3

Query: 307 SCMDSQCAKGPCICKEAADGTL--RIEPEVYSESLSRSVMVQVNSHGQSIFFCF 152
           S  D  C  GPC+CKE  +G    R +P  Y+       + + N  G S  FCF
Sbjct: 461 SASDEPCT-GPCVCKENVEGKACDRCKPGFYN-------LKEKNPRGCSECFCF 506

>RIHC_ECOL6 (P0C0W2) Nonspecific ribonucleoside hydrolase rihC (EC 3.2.-.-)|
           (Purine/pyrimidine ribonucleoside hydrolase)
          Length = 304

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 450 LVHPEYFTFKKGVVRVETQG-ICTGHTLMD 364
           LV PE FT K   V VETQG   +G T++D
Sbjct: 241 LVRPELFTLKPCFVAVETQGEFTSGTTVVD 270

>UBP26_MOUSE (Q99MX1) Ubiquitin carboxyl-terminal hydrolase 26 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 26)
           (Ubiquitin-specific-processing protease 26)
           (Deubiquitinating enzyme 26)
          Length = 835

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 391 HLHRPYFDGSWIEKVEFRKSMVGLCTNFSCMDSQCAKGP 275
           HL R +F+ SW+ K + R  +V      SC  S+  K P
Sbjct: 510 HLKRYHFNESWVMKKDERPILVSKYLRLSCHCSKSTKPP 548


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,797,629
Number of Sequences: 219361
Number of extensions: 1408117
Number of successful extensions: 3784
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3781
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)