Clone Name	rbart43d05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY588275.1| Zea mays putative inosine-uridine preferring nucl...	212	7e-52
2	ref|XM_483754.1| Oryza sativa (japonica cultivar-group), mRNA	168	1e-38
3	dbj|AK065324.1| Oryza sativa (japonica cultivar-group) cDNA clon...	168	1e-38
4	gb|AY109712.1| Zea mays CL31621_2 mRNA sequence	127	3e-26
5	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	115	1e-22
6	dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D...	115	1e-22
7	dbj|AK061415.1| Oryza sativa (japonica cultivar-group) cDNA clon...	82	2e-12
8	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
9	dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
10	dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
11	emb|CR759947.5| Gorilla DNA sequence from clone CH255-315F17, co...	46	0.099
12	gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, co...	46	0.099
13	emb|X07277.1|GGNCAD Chicken mRNA for N-cadherin	44	0.39
14	gb|AC012365.6| Homo sapiens BAC clone RP11-459C22 from 2, comple...	44	0.39
15	gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosom...	44	0.39
16	ref|NM_001001615.1| Gallus gallus cadherin 2, type 1, N-cadherin...	44	0.39
17	ref|XM_713002.1| Candida albicans SC5314 putative ABC family tra...	42	1.5
18	ref|XM_712936.1| Candida albicans SC5314 putative ABC family tra...	42	1.5
19	gb|AC172242.3| Gallus gallus BAC clone CH261-162M6 from chromoso...	42	1.5
20	gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome...	42	1.5
21	gb|AC091660.2| Bos taurus clone RP42-354B6, complete sequence	42	1.5
22	emb|AL513320.30| Human DNA sequence from clone RP11-46F15 on chr...	42	1.5
23	gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome...	42	1.5
24	gb|AC090505.10| Homo sapiens 3 BAC RP11-152D21 (Roswell Park Can...	42	1.5
25	gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, comple...	42	1.5
26	gb|AY106135.1| Zea mays PCO154542 mRNA sequence	42	1.5
27	emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chr...	42	1.5
28	gb|AC137117.15| Mus musculus chromosome 15, clone RP23-242E20, c...	40	6.1
29	gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...	40	6.1
30	ref|XM_640143.1| Dictyostelium discoideum hypothetical protein (...	40	6.1
31	gb|AC095018.2| Drosophila melanogaster clone BACR24L18, complete...	40	6.1
32	ref|XM_426559.1| PREDICTED: Gallus gallus similar to transmembra...	40	6.1
33	gb|AC183274.3| Pan troglodytes BAC clone CH251-156F5 from chromo...	40	6.1
34	gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875...	40	6.1
35	gb|AC134906.3| Mus musculus BAC clone RP23-361K7 from chromosome...	40	6.1
36	gb|AC121940.3| Mus musculus BAC clone RP24-209B21 from chromosom...	40	6.1
37	gb|AY194049.1| HIV-1 isolate UGANC1 from Uganda nonfunctional ta...	40	6.1
38	gb|AY194048.1| HIV-1 isolate UG3 from Uganda nonfunctional tat p...	40	6.1
39	gb|AY194034.1| HIV-1 isolate UGMED2 from Uganda tat protein (tat...	40	6.1
40	gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, comp...	40	6.1
41	emb|AL359257.9| Human DNA sequence from clone RP11-226E21 on chr...	40	6.1
42	emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on ch...	40	6.1
43	gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome	40	6.1
44	emb|BX510945.13| Zebrafish DNA sequence from clone CH211-59D17 i...	40	6.1
45	gb|AC036111.7| Homo sapiens chromosome 2, clone RP11-738O11, com...	40	6.1
46	gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswel...	40	6.1
47	gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, com...	40	6.1
48	emb|BX510315.6| Zebrafish DNA sequence from clone CH211-59I18 in...	40	6.1
49	gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswel...	40	6.1
50	gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, com...	40	6.1
51	gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence	40	6.1
52	gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3...	40	6.1
53	gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromo...	40	6.1
54	gb|AC048341.22| Homo sapiens 12 BAC RP11-631N16 (Roswell Park Ca...	40	6.1
55	gb|AC091636.1|AC091636 Drosophila melanogaster, chromosome 3R, r...	40	6.1
56	gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, r...	40	6.1
57	gb|AC009501.4| Homo sapiens BAC clone RP11-511I11 from 2, comple...	40	6.1
58	gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, comple...	40	6.1
59	emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on ch...	40	6.1
60	gb|BC094158.1| Xenopus laevis cDNA clone MGC:115288 IMAGE:686110...	40	6.1
61	gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome	40	6.1
62	gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Canc...	40	6.1
63	emb|BX510368.7| Zebrafish DNA sequence from clone DKEY-190P19 in...	40	6.1
64	emb|AL954739.9| Zebrafish DNA sequence from clone CH211-192K9 in...	40	6.1
65	emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in ...	40	6.1
66	gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69...	40	6.1
67	gb|AE003715.4| Drosophila melanogaster chromosome 3R, section 53...	40	6.1
68	gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77...	40	6.1
69	gb|AC148246.3| Saimiri boliviensis boliviensis clone CH254-471K1...	40	6.1
70	emb|AL929382.9| Mouse DNA sequence from clone RP23-136C24 on chr...	40	6.1
71	gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (B...	40	6.1
72	gb|L07835.1|DROABDB Drosophila melanogaster (clone DS07696) Abd-...	40	6.1

---

>gb|AY588275.1| Zea mays putative inosine-uridine preferring nucleoside hydrolase
            mRNA, complete cds
          Length = 1458

 Score =  212 bits (107), Expect = 7e-52
 Identities = 182/207 (87%)
 Strand = Plus / Minus

                                                                        
Query: 240  ctcagggtgccatcagcagcttctttacatatgcaaggacctttggcacattgactgtcc 299
            |||| |||||||| ||||||||||||| | |    | ||||||||||||||  || ||||
Sbjct: 1147 ctcatggtgccatgagcagcttctttataaagctgatgacctttggcacatcaaccgtcc 1088

                                                                        
Query: 300  atgcaactgaaattggtgcataacccgaccatggattttctgaattccactttttcaatc 359
            ||||||||||||| |||  ||| || |||||||| || ||||||||||||||||||||||
Sbjct: 1087 atgcaactgaaatcggtttataccctgaccatgggttctctgaattccactttttcaatc 1028

                                                                        
Query: 360  catgatccatcaaagtatggccggtgcaaatgccctgggtctcgactctcacaacaccct 419
            | |||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 1027 cctgatccatcaaagtgtggccagtgcaaatgccctgggtctctactctcaccacaccct 968

                                       
Query: 420  tcttgaatgtgaagtactcgggatgaa 446
            ||||||||||||||||||| |||||||
Sbjct: 967  tcttgaatgtgaagtactctggatgaa 941

---

>ref|XM_483754.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1516

 Score =  168 bits (85), Expect = 1e-38
 Identities = 148/169 (87%)
 Strand = Plus / Minus

                                                                        
Query: 281  tttggcacattgactgtccatgcaactgaaattggtgcataacccgaccatggattttct 340
            ||||||||||  ||||||||||||||||| |||||    || || ||||||||||| |||
Sbjct: 1071 tttggcacatcaactgtccatgcaactgagattggcttgtagccagaccatggattctct 1012

                                                                        
Query: 341  gaattccactttttcaatccatgatccatcaaagtatggccggtgcaaatgccctgggtc 400
            |||||||||||||||||||| || ||||| ||||| || || ||||||||||||||||| 
Sbjct: 1011 gaattccactttttcaatccttggtccattaaagtgtgaccagtgcaaatgccctgggtt 952

                                                             
Query: 401  tcgactctcacaacacccttcttgaatgtgaagtactcgggatgaacta 449
            || ||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 951  tctactctcacaacacccttcttgaacgtgaagtactcagggtgaacta 903

---

>dbj|AK065324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P23, full
            insert sequence
          Length = 1517

 Score =  168 bits (85), Expect = 1e-38
 Identities = 148/169 (87%)
 Strand = Plus / Minus

                                                                        
Query: 281  tttggcacattgactgtccatgcaactgaaattggtgcataacccgaccatggattttct 340
            ||||||||||  ||||||||||||||||| |||||    || || ||||||||||| |||
Sbjct: 1072 tttggcacatcaactgtccatgcaactgagattggcttgtagccagaccatggattctct 1013

                                                                        
Query: 341  gaattccactttttcaatccatgatccatcaaagtatggccggtgcaaatgccctgggtc 400
            |||||||||||||||||||| || ||||| ||||| || || ||||||||||||||||| 
Sbjct: 1012 gaattccactttttcaatccttggtccattaaagtgtgaccagtgcaaatgccctgggtt 953

                                                             
Query: 401  tcgactctcacaacacccttcttgaatgtgaagtactcgggatgaacta 449
            || ||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 952  tctactctcacaacacccttcttgaacgtgaagtactcagggtgaacta 904

---

>gb|AY109712.1| Zea mays CL31621_2 mRNA sequence
          Length = 877

 Score =  127 bits (64), Expect = 3e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                       
Query: 355 caatccatgatccatcaaagtatggccggtgcaaatgccctgggtctcgactctcacaac 414
           |||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||| ||
Sbjct: 644 caatccctgatccatcaaagtgtggccagtgcaaatgccctgggtctctaccctcaccac 703

                                           
Query: 415 acccttcttgaatgtgaagtactcgggatgaa 446
           |||||||||||||||||||||||| |||||||
Sbjct: 704 acccttcttgaatgtgaagtactctggatgaa 735



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Plus

                                                                       
Query: 240 ctcagggtgccatcagcagcttctttacatatgcaaggacctttggcacattgactgtcc 299
           |||| |||||||| ||||||||||||| | |    | |||||||| |||||  || ||||
Sbjct: 313 ctcatggtgccataagcagcttctttataaagctgatgacctttgccacatcaaccgtcc 372

                                                             
Query: 300 atgcaactgaaattggtgcataacccgaccatggattttctgaattccac 349
           ||||||||||||| |||  ||| || |||||||| || ||||||||||||
Sbjct: 373 atgcaactgaaatcggtttataccctgaccatgggttctctgaattccac 422

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                            
Query: 348      actttttcaatccatgatccatcaaagtatggccggtgcaaatgccctgggtctcgactc 407
                ||||||||||||| || ||||| ||||| || || ||||||||||||||||| || ||||
Sbjct: 27916254 actttttcaatccttggtccattaaagtgtgaccagtgcaaatgccctgggtttctactc 27916313

                                                          
Query: 408      tcacaacacccttcttgaatgtgaagtactcgggatgaacta 449
                ||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 27916314 tcacaacacccttcttgaacgtgaagtactcagggtgaacta 27916355



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                            
Query: 281      tttggcacattgactgtccatgcaactgaaattggtgcataacccgaccatggattttct 340
                ||||||||||  ||||||||||||||||| |||||    || || ||||||||||| |||
Sbjct: 27916050 tttggcacatcaactgtccatgcaactgagattggcttgtagccagaccatggattctct 27916109

                         
Query: 341      gaattccac 349
                |||||||||
Sbjct: 27916110 gaattccac 27916118

---

>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1150_A11
          Length = 142010

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 348    actttttcaatccatgatccatcaaagtatggccggtgcaaatgccctgggtctcgactc 407
              ||||||||||||| || ||||| ||||| || || ||||||||||||||||| || ||||
Sbjct: 124332 actttttcaatccttggtccattaaagtgtgaccagtgcaaatgccctgggtttctactc 124391

                                                        
Query: 408    tcacaacacccttcttgaatgtgaagtactcgggatgaacta 449
              ||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 124392 tcacaacacccttcttgaacgtgaagtactcagggtgaacta 124433



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                          
Query: 281    tttggcacattgactgtccatgcaactgaaattggtgcataacccgaccatggattttct 340
              ||||||||||  ||||||||||||||||| |||||    || || ||||||||||| |||
Sbjct: 124128 tttggcacatcaactgtccatgcaactgagattggcttgtagccagaccatggattctct 124187

                       
Query: 341    gaattccac 349
              |||||||||
Sbjct: 124188 gaattccac 124196

---

>dbj|AK061415.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D09, full
            insert sequence
          Length = 1329

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 97/113 (85%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                        
Query: 338  tctgaattccactttttcaatcc-atgatccatcaaagtatggccggtgcaaatgccctg 396
            |||||||||||||| |||| ||| ||| |||||  ||||||| ||  |||| ||||||||
Sbjct: 1002 tctgaattccacttcttcagtcccatg-tccatggaagtatgccccttgcagatgccctg 944

                                                                 
Query: 397  ggtctcgactctcacaacacccttcttgaatgtgaagtactcgggatgaacta 449
            |||||| || ||||| || ||||||||||| |||||||||||||| |||||||
Sbjct: 943  ggtctcaaccctcaccacgcccttcttgaacgtgaagtactcggggtgaacta 891

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                            
Query: 384      tgcaaatgccctgggtctcgactctcacaacacccttcttgaatgtgaagtactcgggat 443
                |||| |||||||||||||| || ||||| || ||||||||||| |||||||||||||| |
Sbjct: 22376643 tgcagatgccctgggtctcaaccctcaccacgcccttcttgaacgtgaagtactcggggt 22376702

                      
Query: 444      gaacta 449
                ||||||
Sbjct: 22376703 gaacta 22376708

---

>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1155_H10
          Length = 140475

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                          
Query: 384    tgcaaatgccctgggtctcgactctcacaacacccttcttgaatgtgaagtactcgggat 443
              |||| |||||||||||||| || ||||| || ||||||||||| |||||||||||||| |
Sbjct: 138651 tgcagatgccctgggtctcaaccctcaccacgcccttcttgaacgtgaagtactcggggt 138710

                    
Query: 444    gaacta 449
              ||||||
Sbjct: 138711 gaacta 138716

---

>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1003_C09
          Length = 124746

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                         
Query: 384   tgcaaatgccctgggtctcgactctcacaacacccttcttgaatgtgaagtactcgggat 443
             |||| |||||||||||||| || ||||| || ||||||||||| |||||||||||||| |
Sbjct: 13132 tgcagatgccctgggtctcaaccctcaccacgcccttcttgaacgtgaagtactcggggt 13191

                   
Query: 444   gaacta 449
             ||||||
Sbjct: 13192 gaacta 13197

---

>emb|CR759947.5| Gorilla DNA sequence from clone CH255-315F17, complete sequence
          Length = 97153

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 330   atggattttctgaattccactttttca 356
             ||||| |||||||||||||||||||||
Sbjct: 39828 atggactttctgaattccactttttca 39802

---

>gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, complete sequence
          Length = 200070

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 330    atggattttctgaattccactttttca 356
              ||||| |||||||||||||||||||||
Sbjct: 144209 atggactttctgaattccactttttca 144183

---

>emb|X07277.1|GGNCAD Chicken mRNA for N-cadherin
          Length = 3203

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 152 aaaacagaaaaatatactttgg 173
           ||||||||||||||||||||||
Sbjct: 243 aaaacagaaaaatatactttgg 264

---

>gb|AC012365.6| Homo sapiens BAC clone RP11-459C22 from 2, complete sequence
          Length = 187848

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 29     atgtagttgtatatataaatgt 50
              ||||||||||||||||||||||
Sbjct: 117162 atgtagttgtatatataaatgt 117183

---

>gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosome ul, complete sequence
          Length = 233533

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 152    aaaacagaaaaatatactttgg 173
              ||||||||||||||||||||||
Sbjct: 175808 aaaacagaaaaatatactttgg 175787

---

>ref|NM_001001615.1| Gallus gallus cadherin 2, type 1, N-cadherin (neuronal) (CDH2),
           mRNA
          Length = 3203

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 152 aaaacagaaaaatatactttgg 173
           ||||||||||||||||||||||
Sbjct: 243 aaaacagaaaaatatactttgg 264

---

>ref|XM_713002.1| Candida albicans SC5314 putative ABC family transporter (CaO19_5759),
            mRNA
          Length = 4488

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 371  aaagtatggccggtgcaaatgccctgggt 399
            ||||||| ||||||||||||||| |||||
Sbjct: 1913 aaagtattgccggtgcaaatgccatgggt 1941

---

>ref|XM_712936.1| Candida albicans SC5314 putative ABC family transporter
            (CaO19_13182), mRNA
          Length = 4488

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 371  aaagtatggccggtgcaaatgccctgggt 399
            ||||||| ||||||||||||||| |||||
Sbjct: 1913 aaagtattgccggtgcaaatgccatgggt 1941

---

>gb|AC172242.3| Gallus gallus BAC clone CH261-162M6 from chromosome ul, complete sequence
          Length = 252782

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 334    attttctgaattccacttttt 354
              |||||||||||||||||||||
Sbjct: 191830 attttctgaattccacttttt 191810

---

>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete sequence
          Length = 193610

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     ttttttccaaatttgaaatgt 32
              |||||||||||||||||||||
Sbjct: 149918 ttttttccaaatttgaaatgt 149898

---

>gb|AC091660.2| Bos taurus clone RP42-354B6, complete sequence
          Length = 173068

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     tttttccaaatttgaaatgta 33
              |||||||||||||||||||||
Sbjct: 136262 tttttccaaatttgaaatgta 136242

---

>emb|AL513320.30| Human DNA sequence from clone RP11-46F15 on chromosome 1 Contains the
             5' end of the EGFL3 gene for EGF-like-domain multiple 3, a
             novel gene, the gene for a novel protein (FLJ39108,
             FLJ21756 and FLJ21811), the 3' end of the WDR8 gene for WD
             repeat domain 8 and five CpG islands, complete sequence
          Length = 130141

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 329   catggattttctgaattccactttt 353
             |||||||| ||||||||||||||||
Sbjct: 88235 catggattctctgaattccactttt 88211

---

>gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome 12, complete sequence
          Length = 201524

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    ttttttccaaatttgaaatgt 32
             |||||||||||||||||||||
Sbjct: 45112 ttttttccaaatttgaaatgt 45092

---

>gb|AC090505.10| Homo sapiens 3 BAC RP11-152D21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86560

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    ttttccaaatttgaaatgtag 34
             |||||||||||||||||||||
Sbjct: 80762 ttttccaaatttgaaatgtag 80742

---

>gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, complete sequence
          Length = 163408

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 142    cttgcttctaaaaacagaaaa 162
              |||||||||||||||||||||
Sbjct: 137100 cttgcttctaaaaacagaaaa 137120

---

>gb|AY106135.1| Zea mays PCO154542 mRNA sequence
          Length = 944

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 372 aagtatggccggtgcaaatgccctgggtctcgactctcacaacacccttcttgaatgtga 431
           ||||||| |||  ||| |||||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 650 aagtatgcccgacgcagatgccctgcgtctccaccctcaccacgcccttcttgaacgtga 591

            
Query: 432 a 432
           |
Sbjct: 590 a 590

---

>emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chromosome X, complete
              sequence
          Length = 183291

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     gctgtcacaatgctgtctgtc 82
              |||||||||||||||||||||
Sbjct: 145223 gctgtcacaatgctgtctgtc 145243

---

>gb|AC137117.15| Mus musculus chromosome 15, clone RP23-242E20, complete sequence
          Length = 202147

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   aaaacagaaaaatatacttt 171
             ||||||||||||||||||||
Sbjct: 80023 aaaacagaaaaatatacttt 80004

---

>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     tgcagaatttacccccattg 105
              ||||||||||||||||||||
Sbjct: 449776 tgcagaatttacccccattg 449757

---

>ref|XM_640143.1| Dictyostelium discoideum hypothetical protein (DDB0216999), partial
            mRNA
          Length = 7347

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   taaatgtttggaatcaatgc 63
            ||||||||||||||||||||
Sbjct: 6980 taaatgtttggaatcaatgc 6999

---

>gb|AC095018.2| Drosophila melanogaster clone BACR24L18, complete sequence
          Length = 163116

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   aaaaacagaaaaatatactt 170
             ||||||||||||||||||||
Sbjct: 12756 aaaaacagaaaaatatactt 12775

---

>ref|XM_426559.1| PREDICTED: Gallus gallus similar to transmembrane protein with
            EGF-like and two follistatin-like domains 2 (LOC429002),
            mRNA
          Length = 4818

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 68   acaatgctgtctgtcatgtgcaga 91
            |||||||| |||||||||||||||
Sbjct: 3904 acaatgctatctgtcatgtgcaga 3927

---

>gb|AC183274.3| Pan troglodytes BAC clone CH251-156F5 from chromosome 7, complete
              sequence
          Length = 163934

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tttgaaatgtagttgtatat 42
              ||||||||||||||||||||
Sbjct: 157798 tttgaaatgtagttgtatat 157779

---

>gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4,
             complete sequence
          Length = 257109

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    taaatgtttggaatcaatgc 63
             ||||||||||||||||||||
Sbjct: 38997 taaatgtttggaatcaatgc 39016

---

>gb|AC134906.3| Mus musculus BAC clone RP23-361K7 from chromosome 19, complete sequence
          Length = 192484

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tctgtcatgtgcagaattta 96
             ||||||||||||||||||||
Sbjct: 24277 tctgtcatgtgcagaattta 24258

---

>gb|AC121940.3| Mus musculus BAC clone RP24-209B21 from chromosome 19, complete sequence
          Length = 203390

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tctgtcatgtgcagaattta 96
              ||||||||||||||||||||
Sbjct: 113091 tctgtcatgtgcagaattta 113072

---

>gb|AY194049.1| HIV-1 isolate UGANC1 from Uganda nonfunctional tat protein gene,
           partial sequence
          Length = 261

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 378 ggccggtgcaaatgccctgggtct 401
           ||||||||| ||||||||||||||
Sbjct: 250 ggccggtgctaatgccctgggtct 227

---

>gb|AY194048.1| HIV-1 isolate UG3 from Uganda nonfunctional tat protein gene,
           partial sequence
          Length = 261

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 378 ggccggtgcaaatgccctgggtct 401
           ||||||||| ||||||||||||||
Sbjct: 250 ggccggtgctaatgccctgggtct 227

---

>gb|AY194034.1| HIV-1 isolate UGMED2 from Uganda tat protein (tat) gene, partial
           cds
          Length = 258

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 378 ggccggtgcaaatgccctgggtct 401
           ||||||||| ||||||||||||||
Sbjct: 250 ggccggtgctaatgccctgggtct 227

---

>gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, complete sequence
          Length = 159635

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   tgcttctaaaaacagaaaaatata 167
             |||||||||||||||||| |||||
Sbjct: 14073 tgcttctaaaaacagaaatatata 14096

---

>emb|AL359257.9| Human DNA sequence from clone RP11-226E21 on chromosome 13 Contains
             part of a novel gene (KIAA0916)amd two novel genes,
             complete sequence
          Length = 97477

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    ttgtatatataaatgtttgg 54
             ||||||||||||||||||||
Sbjct: 75204 ttgtatatataaatgtttgg 75185

---

>emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on chromosome 1 Contains the 5'
              end of the SMYD3 gene for SET and MYND domain containing 3,
              an ubiquitin specific protease 6 (Tre-2 oncogene) (USP6)
              pseudogene, a novel gene, a pseudogene similar to part of
              tumor necrosis factor receptor superfamily member 13B
              (TNFRSF13B), a pseudogene similar to part of
              carboxypeptidase D (CPD), the TFB2M gene for mitochondrial
              transcription factor B2, the 5' end of the gene for a novel
              protein (FLJ32001, DKFZp451A152, DKFZp451B077, FLJ00215)
              and two CpG islands, complete sequence
          Length = 207486

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     ttttccaaatttgaaatgta 33
              ||||||||||||||||||||
Sbjct: 178110 ttttccaaatttgaaatgta 178129

---

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     tatgcttgcttctaaaaaca 157
               ||||||||||||||||||||
Sbjct: 1777862 tatgcttgcttctaaaaaca 1777843

---

>emb|BX510945.13| Zebrafish DNA sequence from clone CH211-59D17 in linkage group 21,
             complete sequence
          Length = 202152

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tatatataaatgtttggaat 57
             ||||||||||||||||||||
Sbjct: 84106 tatatataaatgtttggaat 84125

---

>gb|AC036111.7| Homo sapiens chromosome 2, clone RP11-738O11, complete sequence
          Length = 184570

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     aatttgaaatgtagttgtat 40
              ||||||||||||||||||||
Sbjct: 150391 aatttgaaatgtagttgtat 150372

---

>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 195757

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 348    actttttcaatccatgatccatca 371
              |||||||| |||||||||||||||
Sbjct: 178843 actttttctatccatgatccatca 178866

---

>gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, complete sequence
          Length = 177301

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   tgcttctaaaaacagaaaaatata 167
             |||||||||||||||||| |||||
Sbjct: 27244 tgcttctaaaaacagaaatatata 27267

---

>emb|BX510315.6| Zebrafish DNA sequence from clone CH211-59I18 in linkage group 24,
              complete sequence
          Length = 202562

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     tcacaatgctgtctgtcatg 85
              ||||||||||||||||||||
Sbjct: 121065 tcacaatgctgtctgtcatg 121084

---

>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167026

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 348    actttttcaatccatgatccatca 371
              |||||||| |||||||||||||||
Sbjct: 147339 actttttctatccatgatccatca 147316

---

>gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, complete sequence
          Length = 156721

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    tgcttctaaaaacagaaaaatata 167
              |||||||||||||||||| |||||
Sbjct: 115300 tgcttctaaaaacagaaatatata 115277

---

>gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence
          Length = 167475

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    cttctaaaaacagaaaaata 165
              ||||||||||||||||||||
Sbjct: 138966 cttctaaaaacagaaaaata 138947

---

>gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3, complete sequence
          Length = 174133

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ttctaaaaacagaaaaatat 166
             ||||||||||||||||||||
Sbjct: 35042 ttctaaaaacagaaaaatat 35061

---

>gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromosome 7, complete
              sequence
          Length = 168496

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tttgaaatgtagttgtatat 42
              ||||||||||||||||||||
Sbjct: 109278 tttgaaatgtagttgtatat 109297

---

>gb|AC048341.22| Homo sapiens 12 BAC RP11-631N16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 67400

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  aaaacagaaaaatatacttt 171
            ||||||||||||||||||||
Sbjct: 7910 aaaacagaaaaatatacttt 7891

---

>gb|AC091636.1|AC091636 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone
             BACR03M20, complete sequence
          Length = 175335

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   aaaaacagaaaaatatactt 170
             ||||||||||||||||||||
Sbjct: 49729 aaaaacagaaaaatatactt 49710

---

>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone
              BACR26M03, complete sequence
          Length = 197071

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     tgtatatataaatgtttgga 55
              ||||||||||||||||||||
Sbjct: 107803 tgtatatataaatgtttgga 107822

---

>gb|AC009501.4| Homo sapiens BAC clone RP11-511I11 from 2, complete sequence
          Length = 157173

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 131    ttcctcctatgcttgcttctaaaa 154
              |||||||||||||| |||||||||
Sbjct: 151564 ttcctcctatgctttcttctaaaa 151587

---

>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    aactgaaattggtgcataac 323
              ||||||||||||||||||||
Sbjct: 135335 aactgaaattggtgcataac 135354

---

>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete
              sequence
          Length = 180092

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    ctgaattccactttttcaat 358
              ||||||||||||||||||||
Sbjct: 175632 ctgaattccactttttcaat 175651

---

>gb|BC094158.1| Xenopus laevis cDNA clone MGC:115288 IMAGE:6861103, complete cds
          Length = 4580

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 238  ttctcagggtgccatcagca 257
            ||||||||||||||||||||
Sbjct: 2650 ttctcagggtgccatcagca 2669

---

>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 324     ccgaccatggattttctgaa 343
               ||||||||||||||||||||
Sbjct: 2055750 ccgaccatggattttctgaa 2055769

---

>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 158176

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttacatatgcaaggaccttt 283
             ||||||||||||||||||||
Sbjct: 97439 ttacatatgcaaggaccttt 97420

---

>emb|BX510368.7| Zebrafish DNA sequence from clone DKEY-190P19 in linkage group 20,
             complete sequence
          Length = 84687

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    aaatgtagttgtatatataaatgt 50
             |||||||||||||||| |||||||
Sbjct: 79248 aaatgtagttgtatatttaaatgt 79225

---

>emb|AL954739.9| Zebrafish DNA sequence from clone CH211-192K9 in linkage group 20,
             complete sequence
          Length = 154604

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 27    aaatgtagttgtatatataaatgt 50
             |||||||||||||||| |||||||
Sbjct: 66333 aaatgtagttgtatatttaaatgt 66356

---

>emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in linkage group 19,
             complete sequence
          Length = 185640

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     ggaagttttttccaaatttg 26
             ||||||||||||||||||||
Sbjct: 98670 ggaagttttttccaaatttg 98689

---

>gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69 of 118 of the complete
              sequence
          Length = 230001

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     tgtatatataaatgtttgga 55
              ||||||||||||||||||||
Sbjct: 174018 tgtatatataaatgtttgga 174037

---

>gb|AE003715.4| Drosophila melanogaster chromosome 3R, section 53 of 118 of the complete
              sequence
          Length = 228547

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    aaaaacagaaaaatatactt 170
              ||||||||||||||||||||
Sbjct: 144938 aaaaacagaaaaatatactt 144919

---

>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete
              sequence
          Length = 249021

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 348    actttttcaatccatgatccatca 371
              |||||||| |||||||||||||||
Sbjct: 209706 actttttctatccatgatccatca 209683

---

>gb|AC148246.3| Saimiri boliviensis boliviensis clone CH254-471K13, complete sequence
          Length = 177755

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   tgcttctaaaaacagaaaaatata 167
             ||||||||||||| ||||||||||
Sbjct: 95895 tgcttctaaaaacggaaaaatata 95918

---

>emb|AL929382.9| Mouse DNA sequence from clone RP23-136C24 on chromosome X, complete
             sequence
          Length = 201060

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   ttgcttctaaaaacagaaaa 162
             ||||||||||||||||||||
Sbjct: 35139 ttgcttctaaaaacagaaaa 35158

---

>gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (BX-C), complete sequence
          Length = 338234

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   aaaaacagaaaaatatactt 170
             ||||||||||||||||||||
Sbjct: 38780 aaaaacagaaaaatatactt 38799

---

>gb|L07835.1|DROABDB Drosophila melanogaster (clone DS07696) Abd-B gene
          Length = 80423

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   aaaaacagaaaaatatactt 170
             ||||||||||||||||||||
Sbjct: 38780 aaaaacagaaaaatatactt 38799


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,420,004
Number of Sequences: 3902068
Number of extensions: 5420004
Number of successful extensions: 116375
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116138
Number of HSP's gapped (non-prelim): 232
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---