ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart43d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 prec... 30 2.3
2AFRP_STRGR (Q9ZN78) A-factor receptor protein (A-factor-binding ... 30 2.3

>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor|
          Length = 1572

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 228  TMPATTPGSTTEAASISRSILRCSD 154
            TMP T PGST +  S+ R  LR SD
Sbjct: 1432 TMPRTVPGSTMKMGSLERKKLRYSD 1456



to top

>AFRP_STRGR (Q9ZN78) A-factor receptor protein (A-factor-binding protein)|
          Length = 276

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 194 SVVEPGVVAGIVPTGRVGDHVADEEPAERASEQPR 298
           S+  PGV+A I P GRV       E AER  ++ R
Sbjct: 183 SIAHPGVIAHIKPEGRVDLAAQAREKAEREEQEAR 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,562,965
Number of Sequences: 219361
Number of extensions: 518856
Number of successful extensions: 1698
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top