Clone Name | rbart43c02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaattaaagaa 118 |||||||||||||||||||||||||| Sbjct: 20699663 agcagcagcagcagctaattaaagaa 20699688
>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C08 Length = 152460 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaattaaagaa 118 |||||||||||||||||||||||||| Sbjct: 72116 agcagcagcagcagctaattaaagaa 72141
>gb|AY108519.1| Zea mays PCO111031 mRNA sequence Length = 835 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 198 ggagtcctctccctcctaatttaccagctc 227 ||||||||||||||||| |||||||||||| Sbjct: 88 ggagtcctctccctcctcatttaccagctc 117
>gb|BC030770.2| Homo sapiens cDNA clone IMAGE:4813826 Length = 1156 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 69 tacttcagagttcagaatacaacaagcag 97 ||||||||||||||| ||||||||||||| Sbjct: 209 tacttcagagttcagtatacaacaagcag 181
>gb|AC005358.1|AC005358 Homo sapiens chromosome 17, clone hRPK.746_E_8, complete sequence Length = 184886 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 69 tacttcagagttcagaatacaacaagcag 97 ||||||||||||||| ||||||||||||| Sbjct: 114241 tacttcagagttcagtatacaacaagcag 114269
>emb|AL928889.14| Mouse DNA sequence from clone RP23-271L22 on chromosome 2, complete sequence Length = 197191 Score = 46.1 bits (23), Expect = 0.060 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 ttcagagttcagaatacaacaag 94 ||||||||||||||||||||||| Sbjct: 147217 ttcagagttcagaatacaacaag 147195
>gb|AY560107.1| HIV-1 isolate 98USHVTN1925c1 from USA, complete genome Length = 8934 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 553 acaacaagcagcagcagcagct 574
>gb|AY611368.1| HIV-1 isolate Ac-02 Ac 1b.fa from USA gag protein (gag) gene, partial cds Length = 447 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 345 acaacaagcagcagcagcagct 366
>gb|AY360916.1| HIV-1 isolate gag16 from United Kingdom gag protein (gag) gene, partial cds Length = 701 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 237 acaacaagcagcagcagcagct 258
>gb|AY360914.1| HIV-1 isolate gag13 from United Kingdom gag protein (gag) gene, partial cds Length = 698 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 237 acaacaagcagcagcagcagct 258
>gb|AY206651.1| HIV-1 from USA patient R2 gag protein (gag) gene, complete cds Length = 1509 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 345 acaacaagcagcagcagcagct 366
>gb|AC165069.2| Phakopsora pachyrhizi clone JGIAFNA-645A6, complete sequence Length = 40445 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cagcagctaattaaagaaaaaa 122 |||||||||||||||||||||| Sbjct: 15796 cagcagctaattaaagaaaaaa 15775
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 agcagcagcagcagctaattaa 114 |||||||||||||||||||||| Sbjct: 109489 agcagcagcagcagctaattaa 109468
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaattaa 114 |||||||||||||||||||||| Sbjct: 21096217 agcagcagcagcagctaattaa 21096238
>gb|AF073441.1|AF073441 HIV-1 isolate 053i from USA clone 1 gag protein (gag) gene, partial cds Length = 571 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073440.1|AF073440 HIV-1 isolate 053i from USA clone 10 gag protein (gag) gene, partial cds Length = 561 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073439.1|AF073439 HIV-1 isolate 053i from USA clone 2 gag protein (gag) gene, partial cds Length = 571 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073438.1|AF073438 HIV-1 isolate 053i from USA clone 3 gag protein (gag) gene, partial cds Length = 571 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073437.1|AF073437 HIV-1 isolate 053i from USA clone 4 gag protein (gag) gene, partial cds Length = 571 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073436.1|AF073436 HIV-1 isolate 053i from USA clone 5 gag protein (gag) gene, partial cds Length = 553 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073435.1|AF073435 HIV-1 isolate 053i from USA clone 6 gag protein (gag) gene, partial cds Length = 561 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073434.1|AF073434 HIV-1 isolate 053i from USA clone 7 gag protein (gag) gene, partial cds Length = 571 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073433.1|AF073433 HIV-1 isolate 053i from USA clone 8 gag protein (gag) gene, partial cds Length = 569 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AF073432.1|AF073432 HIV-1 isolate 053i from USA clone 9 gag protein (gag) gene, partial cds Length = 569 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagct 108 |||||||||||||||||||||| Sbjct: 321 acaacaagcagcagcagcagct 342
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaattaa 114 |||||||||||||||||||||| Sbjct: 21107481 agcagcagcagcagctaattaa 21107502
>ref|XM_636726.1| Dictyostelium discoideum hypothetical protein (DDB0218154), partial mRNA Length = 2779 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 1123 acaacaagcagcagcagcagc 1143
>gb|BT017789.1| Zea mays clone EL01N0504E06.c mRNA sequence Length = 1255 Score = 42.1 bits (21), Expect = 0.94 Identities = 27/29 (93%) Strand = Plus / Minus Query: 198 ggagtcctctccctcctaatttaccagct 226 |||||||||||||||| ||||||||||| Sbjct: 1079 ggagtcctctccctccccatttaccagct 1051
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 aacaagcagcagcagcagcta 109 ||||||||||||||||||||| Sbjct: 118506 aacaagcagcagcagcagcta 118526
>gb|AY360921.1| HIV-1 isolate gag22 from United Kingdom gag protein (gag) gene, partial cds Length = 698 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 237 acaacaagcagcagcagcagc 257
>gb|AY049826.1| Dalatias licha internal transcribed spacer 2, and 28S ribosomal RNA gene, partial sequence Length = 3830 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 293 acaacaagcagcagcagcagc 273
>emb|AL731576.9| Human DNA sequence from clone RP11-178G16 on chromosome 10 Contains the 3' end of the VCL gene for vinculin, a novel gene, the AP3M1 gene for adaptor-related protein complex 3 mu 1 subunit, the 5' end of the ADK gene for adenosine kinase and two CpG islands, complete sequence Length = 104656 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cagctaattaaagaaaaaatt 124 ||||||||||||||||||||| Sbjct: 84668 cagctaattaaagaaaaaatt 84688
>emb|AL139084.9| Human DNA sequence from clone RP11-318G11 on chromosome 13 Contains part of the gene for zizimin1 (KIAA1085) and a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 80803 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 38896 acaacaagcagcagcagcagc 38916
>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence Length = 163065 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 127794 acaacaagcagcagcagcagc 127814
>gb|AF480673.1| HIV-1 isolate VT18 from Brazil gag protein (gag) gene, partial cds Length = 396 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 273 acaacaagcagcagcagcagc 293
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 164437 acaacaagcagcagcagcagc 164457
>emb|BX470118.9| Zebrafish DNA sequence from clone DKEY-207E22 in linkage group 5, complete sequence Length = 223990 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 cagcagcagcagctaattaaa 115 ||||||||||||||||||||| Sbjct: 140108 cagcagcagcagctaattaaa 140088
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 30806 acaacaagcagcagcagcagc 30826
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 aacaagcagcagcagcagcta 109 ||||||||||||||||||||| Sbjct: 28159951 aacaagcagcagcagcagcta 28159971 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aacaagcagcagcagcagct 108 |||||||||||||||||||| Sbjct: 17651794 aacaagcagcagcagcagct 17651775
>gb|AC008236.4|AC008236 Drosophila melanogaster, chromosome 3R, region 95A-95A, BAC clone BACR24C15, complete sequence Length = 162923 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 aatacaacaagcagcagcagc 104 ||||||||||||||||||||| Sbjct: 28192 aatacaacaagcagcagcagc 28212
>gb|AC008235.4|AC008235 Drosophila melanogaster, chromosome 3R, region 94F-95A, BAC clone BACR15B19, complete sequence Length = 175669 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 aatacaacaagcagcagcagc 104 ||||||||||||||||||||| Sbjct: 140641 aatacaacaagcagcagcagc 140661
>dbj|AK107352.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-H07, full insert sequence Length = 1344 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 444 acaacaagcagcagcagcagc 464
>gb|AF028568.1|AF028568 HIV-1 isolate 115i clone 14 from Massachusetts, gag protein (gag) gene, partial cds Length = 432 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 282 acaacaagcagcagcagcagc 302
>gb|AF028563.1|AF028563 HIV-1 isolate 115i clone 7 from Massachusetts, gag protein (gag) gene, partial cds Length = 416 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 282 acaacaagcagcagcagcagc 302
>dbj|AK062888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D12, full insert sequence Length = 685 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 aacaagcagcagcagcagcta 109 ||||||||||||||||||||| Sbjct: 183 aacaagcagcagcagcagcta 203
>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5) Length = 896449 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 210361 acaacaagcagcagcagcagc 210381
>gb|AE003743.3| Drosophila melanogaster chromosome 3R, section 81 of 118 of the complete sequence Length = 210258 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 aatacaacaagcagcagcagc 104 ||||||||||||||||||||| Sbjct: 148947 aatacaacaagcagcagcagc 148967
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagc 107 ||||||||||||||||||||| Sbjct: 63096 acaacaagcagcagcagcagc 63116
>dbj|AK113476.1| Ciona intestinalis cDNA, clone:ciad060m19, full insert sequence Length = 1468 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagct 108 ||||||||||||||||||||| Sbjct: 548 caacaagcagcagcagcagct 568
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 aacaagcagcagcagcagcta 109 ||||||||||||||||||||| Sbjct: 28144829 aacaagcagcagcagcagcta 28144849 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aacaagcagcagcagcagct 108 |||||||||||||||||||| Sbjct: 17746220 aacaagcagcagcagcagct 17746201
>gb|BT017351.1| Zea mays clone EL01N0323G10.c mRNA sequence Length = 1160 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 acaagcagcagcagcagcta 109 |||||||||||||||||||| Sbjct: 1118 acaagcagcagcagcagcta 1099
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12, complete sequence Length = 147801 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aacaagcagcagcagcagct 108 |||||||||||||||||||| Sbjct: 61687 aacaagcagcagcagcagct 61668
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cagcagcagcagctaattaa 114 |||||||||||||||||||| Sbjct: 133189 cagcagcagcagctaattaa 133208
>gb|BC061056.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cDNA clone IMAGE:6531228) Length = 588 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 306 caacaagcagcagcagcagc 287
>gb|BC042200.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cDNA clone IMAGE:6475538) Length = 572 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 258 caacaagcagcagcagcagc 239
>ref|XM_457868.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C04818g) partial mRNA Length = 1452 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 540 agcagcagcagcagctaatt 559
>gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, complete sequence Length = 227953 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 aatacaacaagcagcagcagcagc 107 |||||||| ||||||||||||||| Sbjct: 55215 aatacaaccagcagcagcagcagc 55192
>ref|XM_714281.1| Candida albicans SC5314 hypothetical protein (CaO19_7613), mRNA Length = 858 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 429 agcagcagcagcagctaatt 410
>ref|XM_705107.1| Candida albicans SC5314 hypothetical protein (CaO19.9372), mRNA Length = 363 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 150 caacaagcagcagcagcagc 169
>ref|XM_705106.1| Candida albicans SC5314 putative peroxisomal peripheral membrane protein Pex14 (CaO19.9371), mRNA Length = 1275 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 1156 caacaagcagcagcagcagc 1175
>ref|XM_705100.1| Candida albicans SC5314 potential peroxisomal peripheral membrane protein Pex14 (CaO19.1805), mRNA Length = 1359 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 1144 caacaagcagcagcagcagc 1163
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cagcagcagcagctaattaa 114 |||||||||||||||||||| Sbjct: 35735411 cagcagcagcagctaattaa 35735430
>gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome 18, complete sequence Length = 195082 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 agtacttcagagttcagaat 86 |||||||||||||||||||| Sbjct: 106694 agtacttcagagttcagaat 106675
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tacaacaagcagcagcagca 105 |||||||||||||||||||| Sbjct: 190378 tacaacaagcagcagcagca 190359
>gb|AC113490.10| Mus musculus chromosome 1, clone RP23-358M7, complete sequence Length = 226924 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 95188 agcagcagcagcagctaatt 95207
>ref|NM_181383.2| Rattus norvegicus glutamate-ammonia ligase (glutamine synthetase) domain containing 1 (Gluld1), mRNA Length = 1910 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gaaaaaattgtgcagggatg 135 |||||||||||||||||||| Sbjct: 520 gaaaaaattgtgcagggatg 501
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 agctaattaaagaaaaaatt 124 |||||||||||||||||||| Sbjct: 162957 agctaattaaagaaaaaatt 162938
>ref|XM_499831.1| Yarrowia lipolytica CLIB122, YALI0A07018g predicted mRNA Length = 3411 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 2670 caacaagcagcagcagcagc 2689
>ref|XM_505155.1| Yarrowia lipolytica CLIB122, YALI0F08305g predicted mRNA Length = 1545 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 1002 caacaagcagcagcagcagc 1021
>emb|AL355490.24| Human DNA sequence from clone RP11-452K12 on chromosome 10 Contains the FRAT1 gene for frequently rearranged in advanced T-cell lymphomas, the FRAT2 gene for frequently rearranged in advanced T-cell lymphomas 2, two novel genes, the gene for a novel protein (FLJ12434,KIAA0690), the PGAM1 gene for phosphoglycerate mutase 1 (brain), the CSL4 gene for exosomal core protein CSL4, the ZDHHC16 gene for zinc finger, DHHC domain containing 16, the 3' end of the MMS19L gene for MMS19-like (MET18 homolog, S. cerevisiae), a ribosomal protein L12 (RPL12) pseudogene, a ribosomal protein L34 (RPL34) pseudogene and four CpG islands, complete sequence Length = 190803 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 aagcagcagcagcagctaat 111 |||||||||||||||||||| Sbjct: 169993 aagcagcagcagcagctaat 170012
>emb|BX064180.1|CNS09LOO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC46BD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 613 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 346 caacaagcagcagcagcagc 365
>emb|BX057922.1|CNS09GUU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC38AD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1017 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 343 caacaagcagcagcagcagc 362
>emb|BX044294.1|CNS096CA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC17DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 769 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 732 caacaagcagcagcagcagc 713
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 396391 agcagcagcagcagctaatt 396410
>gb|AY280501.1| Rattus norvegicus lengsin (Lgs) mRNA, complete cds Length = 1910 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gaaaaaattgtgcagggatg 135 |||||||||||||||||||| Sbjct: 520 gaaaaaattgtgcagggatg 501
>emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in linkage group 5, complete sequence Length = 197143 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aacaagcagcagcagcagct 108 |||||||||||||||||||| Sbjct: 67708 aacaagcagcagcagcagct 67727
>gb|AC113192.3| Homo sapiens chromosome 11, clone RP11-646J21, complete sequence Length = 148308 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aacaagcagcagcagcagct 108 |||||||||||||||||||| Sbjct: 96317 aacaagcagcagcagcagct 96298
>gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, complete sequence Length = 169997 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 161331 agcagcagcagcagctaatt 161312
>tpg|BK002528.1| TPA: TPA_inf: Drosophila melanogaster HDC13464 (HDC13464) gene, complete cds Length = 692 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 46 caacaagcagcagcagcagc 27
>gb|AC093916.2| Homo sapiens BAC clone RP11-789C2 from 4, complete sequence Length = 162632 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 acaagcagcagcagcagcta 109 |||||||||||||||||||| Sbjct: 113839 acaagcagcagcagcagcta 113858
>gb|AC163764.4| Pan troglodytes BAC clone CH251-169M18 from chromosome unknown, complete sequence Length = 195947 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 53184 agcagcagcagcagctaatt 53165
>gb|AC156839.4| Pan troglodytes BAC clone CH251-349M12 from chromosome unknown, complete sequence Length = 190719 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 182860 agcagcagcagcagctaatt 182879
>dbj|AK077356.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330437E06 product:unclassifiable, full insert sequence Length = 873 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 339 caacaagcagcagcagcagc 320
>dbj|AK002502.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610010M13 product:hypothetical protein, full insert sequence Length = 886 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 644 caacaagcagcagcagcagc 625
>dbj|AK008437.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010204K13 product:unclassifiable, full insert sequence Length = 538 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 296 caacaagcagcagcagcagc 277
>gb|AC148684.1| Macaca mulatta Major Histocompatibility Complex BAC MMU179H14, complete sequence Length = 165072 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 cagctaattaaagaaaaaattgtg 127 |||||||||||| ||||||||||| Sbjct: 116270 cagctaattaaaaaaaaaattgtg 116247
>gb|BC072610.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cDNA clone IMAGE:6407718) Length = 490 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 219 caacaagcagcagcagcagc 200
>gb|AC016987.4|AC016987 Homo sapiens chromosome 15, clone RP11-133L19, complete sequence Length = 176639 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 aatacaacaagcagcagcagcagc 107 |||||||||| ||||||||||||| Sbjct: 89695 aatacaacaaccagcagcagcagc 89672
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 15507373 caacaagcagcagcagcagc 15507354
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cagcagcagcagctaattaa 114 |||||||||||||||||||| Sbjct: 35825484 cagcagcagcagctaattaa 35825503
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 30219216 caacaagcagcagcagcagc 30219235
>gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D14 map 3p, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 31099 agcagcagcagcagctaatt 31118
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 cagctaattaaagaaaaaattgtg 127 |||||||||||| ||||||||||| Sbjct: 2682212 cagctaattaaaaaaaaaattgtg 2682235
>gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone BACR30G22, complete sequence Length = 167912 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 112518 caacaagcagcagcagcagc 112499
>gb|AC012313.7| Homo sapiens chromosome 19 clone CTD-2619J13, complete sequence Length = 185417 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cagctaattaaagaaaaaat 123 |||||||||||||||||||| Sbjct: 78180 cagctaattaaagaaaaaat 78199
>gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome 8, complete sequence Length = 229472 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 215389 caacaagcagcagcagcagc 215370 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 100200 caacaagcagcagcagcagc 100181
>gb|AC143330.4| Mus musculus BAC clone RP23-263D5 from chromosome 6, complete sequence Length = 207749 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aacaagcagcagcagcagct 108 |||||||||||||||||||| Sbjct: 163156 aacaagcagcagcagcagct 163175
>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence Length = 182171 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 56001 agcagcagcagcagctaatt 55982
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 7535 caacaagcagcagcagcagc 7554
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 124038 caacaagcagcagcagcagc 124057
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 107 ctaattaaagaaaaaattgtgcagggat 134 ||||||||||||||||||| ||||||| Sbjct: 158989 ctaattaaagaaaaaattgaacagggat 158962
>emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chromosome 4, complete sequence Length = 129246 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 acaacaagcagcagcagcagctaa 110 |||| ||||||||||||||||||| Sbjct: 33205 acaagaagcagcagcagcagctaa 33228
>gb|AY974244.1| Homo sapiens MMS19-like (MET18 homolog, S. cerevisiae) (MMS19L) gene, complete cds Length = 42517 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aagcagcagcagcagctaat 111 |||||||||||||||||||| Sbjct: 31554 aagcagcagcagcagctaat 31535
>dbj|AK109795.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-E06, full insert sequence Length = 1623 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cagcagcagcagctaattaa 114 |||||||||||||||||||| Sbjct: 136 cagcagcagcagctaattaa 155
>gb|AF038507.1|AF038507 Mus musculus CIP7 (cip7) mRNA, complete cds Length = 501 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 259 caacaagcagcagcagcagc 240
>gb|M12255.1|MUSTGH2 Mus musculus tRNA-His gene, complete sequence Length = 799 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 576 caacaagcagcagcagcagc 595
>gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39 of 118 of the complete sequence Length = 208368 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 186661 caacaagcagcagcagcagc 186642
>emb|BX629354.1|CNS09SBQ Tetraodon nigroviridis BAC sequence Length = 95048 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 60538 caacaagcagcagcagcagc 60519
>gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, complete sequence Length = 136996 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aagcagcagcagcagctaat 111 |||||||||||||||||||| Sbjct: 83826 aagcagcagcagcagctaat 83807
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gcagctaattaaagaaaaaa 122 |||||||||||||||||||| Sbjct: 2113051 gcagctaattaaagaaaaaa 2113070
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 15461655 caacaagcagcagcagcagc 15461636
>emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0076H14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 53315 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 1210 caacaagcagcagcagcagc 1191
>gb|AC132444.3| Mus musculus BAC clone RP23-160D6 from 8, complete sequence Length = 206961 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 118611 caacaagcagcagcagcagc 118630
>gb|AC131696.4| Mus musculus BAC clone RP23-403E5 from 1, complete sequence Length = 214068 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 85788 caacaagcagcagcagcagc 85807
>emb|AL929075.5| Zebrafish DNA sequence from clone CH211-132B9 in linkage group 5, complete sequence Length = 195380 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aacaagcagcagcagcagct 108 |||||||||||||||||||| Sbjct: 5998 aacaagcagcagcagcagct 5979
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 1164718 caacaagcagcagcagcagc 1164699
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 682970 caacaagcagcagcagcagc 682989
>emb|AL663104.17| Mouse DNA sequence from clone RP23-207H18 on chromosome X, complete sequence Length = 211462 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 186031 caacaagcagcagcagcagc 186050
>emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on chromosome 2, complete sequence Length = 165908 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caacaagcagcagcagcagc 107 |||||||||||||||||||| Sbjct: 104894 caacaagcagcagcagcagc 104913
>emb|X76583.1|HSRWG1F9 H.sapiens simple DNA sequence region clone wg1f9 Length = 184 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 aatacaacaagcagcagcagcagc 107 |||||||||| ||||||||||||| Sbjct: 5 aatacaacaaccagcagcagcagc 28
>gb|AC027124.5| Homo sapiens chromosome 3 clone RP11-449E21 map 3p, complete sequence Length = 208989 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 1134 agcagcagcagcagctaatt 1153
>gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p, complete sequence Length = 175121 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 agcagcagcagcagctaatt 112 |||||||||||||||||||| Sbjct: 1909 agcagcagcagcagctaatt 1890 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,577,933 Number of Sequences: 3902068 Number of extensions: 3577933 Number of successful extensions: 261548 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 259935 Number of HSP's gapped (non-prelim): 1609 length of query: 285 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 263 effective length of database: 17,147,199,772 effective search space: 4509713540036 effective search space used: 4509713540036 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)