>LONH1_THEAC (Q9HJ89) Putative protease La homolog type 1 (EC 3.4.21.-)|
          Length = 657

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 KKERGKKLLPLDLHVEYVGGTRGREGHAKS 97
           KK  GK +  +D+H+++VG   G EG + S
Sbjct: 498 KKLTGKDISNMDIHIQFVGTYEGVEGDSAS 527

>LONH1_THEVO (P58274) Putative protease La homolog type 1 (EC 3.4.21.-)|
          Length = 655

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 KKERGKKLLPLDLHVEYVGGTRGREGHAKS 97
           KK  GK +  +D+H+++VG   G EG + S
Sbjct: 498 KKITGKDISNMDIHIQFVGTYEGVEGDSAS 527

>RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial precursor (EC|
           2.7.7.6) (MtRPOL)
          Length = 1230

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -2

Query: 289 PLPTEGHLPHLSAPSLLAQVFRRALA 212
           P P E HLPH +AP+  A++ RR LA
Sbjct: 739 PQPPEAHLPHSAAPARKAEL-RRELA 763

>ORN_VIBCH (Q9KV17) Oligoribonuclease (EC 3.1.-.-)|
          Length = 181

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 98  LPRSISFLYFYRIDFTGLKRLGRKWQESVL 9
           +PR  ++ ++  ID + +K L R+WQ  VL
Sbjct: 120 MPRLEAYFHYRYIDVSTIKELTRRWQPEVL 149

>CX036_HUMAN (Q9H7Y0) Protein CXorf36 precursor|
          Length = 182

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 46  RPVKSMR*--KYRKEILRGRLCVSLSTPRTTNVLYVQVKGQ*F 168
           RPV+  R   KY+ EI   R+C S S P+T ++  V  K + F
Sbjct: 109 RPVEIFRLVSKYQNEISDRRICASASAPKTCSIERVLRKTERF 151

>TLR4_PIG (Q68Y56) Toll-like receptor 4 precursor (CD284 antigen)|
          Length = 841

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 134 LVVRGVERDTQSLPRSISFLYFYRIDFT 51
           L+V   E++ Q LPRS++FL   + DF+
Sbjct: 555 LIVASKEQELQHLPRSLAFLNLTKNDFS 582

>GSHB_SYNPX (Q7U3W8) Glutathione synthetase (EC 6.3.2.3) (Glutathione synthase)|
           (GSH synthetase) (GSH-S) (GSHase)
          Length = 307

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 207 NRASARRNTWARRLGALRWGRW 272
           NR SA R  W  +LGALR+ RW
Sbjct: 109 NRPSALR-AWNEKLGALRFSRW 129

>LONH_ARCFU (O29883) Putative protease La homolog type (EC 3.4.21.-)|
          Length = 621

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 186 KKERGKKLLPLDLHVEYVGGTRGREGHAKS 97
           KK  G+ +  +D+H+++VG   G EG + S
Sbjct: 482 KKYTGRDISNMDVHIQFVGTYEGVEGDSAS 511


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,516,406
Number of Sequences: 219361
Number of extensions: 648656
Number of successful extensions: 1611
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)