Clone Name | rbart43b08 |
---|---|
Clone Library Name | barley_pub |
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 32.7 bits (73), Expect = 0.52 Identities = 34/135 (25%), Positives = 58/135 (42%) Frame = +2 Query: 11 SVSLSLIPMSITEITSSSRKS*NTSFCP*GRYSRLHRYQIFIHASQNMNLSREDISRGHP 190 S S SL S +TSSS S +S ++ + +S + +S +S H Sbjct: 93 SSSASLTSSSSATLTSSSSASPTSSS---SSHALSSSSSSLVASSSSSGMSSSSLS--HS 147 Query: 191 SLLPALSSGLHASLPASSSRNRRSDATFHSNRCPCCIPSTITTSNWSFSHRPLATSNRWG 370 S +P+ SS H+S +S + + + R I + ++TS S P T+N Sbjct: 148 SSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNNWNS 207 Query: 371 SRCISGPLVTTPLAS 415 S + +TP++S Sbjct: 208 SSSFTSSTSSTPISS 222
>RSSAA_ARATH (Q08682) 40S ribosomal protein SA-1 (p40) (Laminin receptor| homolog) Length = 298 Score = 31.2 bits (69), Expect = 1.5 Identities = 26/97 (26%), Positives = 29/97 (29%), Gaps = 3/97 (3%) Frame = -2 Query: 478 EQEDEAAGAPEYTAITDYXXXAGQWGGDQWTADAPAPPPVTGGEWPMAEXXXXXXXXXXX 299 E EDEA EY A+ G GGDQWT + WP Sbjct: 217 EDEDEAGPQAEYGALP--APEYGMVGGDQWTT-----AQIPDAAWP--------GEGQAP 261 Query: 298 XXXXXXXXXXXXXXXXXXATGWEAGVQPA---AQGWE 197 GWEA P+ A GWE Sbjct: 262 ISAAPAAASWSDSAAAPADGGWEAAAPPSGAPAAGWE 298
>REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing protein 1| (RalBP1-interacting protein 1) Length = 744 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = +2 Query: 125 QIFIHASQNMNLSREDISRGHPSLLPALSSGLHASLPASSSRNRRSDA 268 Q + A+ N+N ++D + HP +LPA AS PASS R ++D+ Sbjct: 580 QFEVFAASNVNDEQDDEAEKHPEVLPAEK----ASDPASSLRVAKTDS 623
>ALR2_YEAST (P43553) Magnesium transporter ALR2 (Aluminum resistance protein 2)| Length = 858 Score = 28.9 bits (63), Expect = 7.5 Identities = 22/72 (30%), Positives = 31/72 (43%) Frame = +2 Query: 107 SRLHRYQIFIHASQNMNLSREDISRGHPSLLPALSSGLHASLPASSSRNRRSDATFHSNR 286 S H+ QI + + + RGH + LPA +S +L ASSS TF S R Sbjct: 127 SETHQKQIHVESIAPSLPKNAALERGHDTALPAGTSSNRCNLEASSSAR-----TFTSAR 181 Query: 287 CPCCIPSTITTS 322 + + TS Sbjct: 182 KASLVSAIFETS 193
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 28.9 bits (63), Expect = 7.5 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +2 Query: 125 QIFIHASQNMNLSREDISRGHPSLLPALSSGLHASL---PASSSR--NRRSDATFHSNRC 289 QIF+ +N + GH + P ++SG+ AS P S R N +S + R Sbjct: 307 QIFLDGQENKRRRHDSSGSGHSAFEPLVASGVPASFVPKPGSLKRGLNSQSSDDHLNKRS 366 Query: 290 PCCIPSTIT---TSNWSFSHRPLATSNRWGSRCIS 385 S++T TS S R TS+ +R IS Sbjct: 367 RSSSMSSLTGAYTSGIPSSSRNAITSSYSSTRGIS 401
>Y416_THEMA (Q9WYP7) Hypothetical protein TM0416| Length = 270 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/71 (25%), Positives = 28/71 (39%) Frame = +2 Query: 167 EDISRGHPSLLPALSSGLHASLPASSSRNRRSDATFHSNRCPCCIPSTITTSNWSFSHRP 346 E ++R + + L +S+R TFH N IP ++ + H Sbjct: 149 EPLNRYETDFINTIDDALRILRKINSNRVGILADTFHMNIEEVNIPESLKRAGEKLYHFH 208 Query: 347 LATSNRWGSRC 379 +A SNRW C Sbjct: 209 VADSNRWAPGC 219
>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)| (Solute carrier family 4 anion exchanger member 1 adapter protein) (Lung cancer oncogene 3 protein) Length = 796 Score = 28.9 bits (63), Expect = 7.5 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +2 Query: 101 RYSRLHRYQIFIHASQNMNLSREDISRGHPSLLPALSSGLHASLPASSSRN 253 R S+LHR ++ SQ+ L+ +D+S +S + PASSS N Sbjct: 46 RISKLHRLRMADILSQSETLASQDLSGDFKKPALPVSPAARSKAPASSSSN 96
>SUL2_YEAST (Q12325) Sulfate permease 2 (High-affinity sulfate transporter 2)| Length = 893 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +2 Query: 368 GSRCISGPLVTTPLASCCGVIS 433 G I+GP++ T LA CG+IS Sbjct: 215 GDSAITGPVIATTLALLCGIIS 236
>LIRA1_HUMAN (O75019) Leukocyte immunoglobulin-like receptor subfamily A member| 1 precursor (Leucocyte immunoglobulin-like receptor 6) (LIR-6) (CD85i antigen) Length = 489 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Frame = +2 Query: 290 PCCIPSTITTSNWS---FSHRPLATSNRWGSRC 379 P C+ S T WS FS P++ S RW RC Sbjct: 165 PQCLNSQPRTHGWSRAIFSVGPVSPSRRWSYRC 197
>SL9A6_HUMAN (Q92581) Sodium/hydrogen exchanger 6 (Na(+)/H(+) exchanger 6)| (NHE-6) (Solute carrier family 9 member 6) Length = 669 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +2 Query: 383 SGPLVTTPLASCCGVISDC 439 SGP +TT L +CCG I+ C Sbjct: 553 SGPPLTTTLPACCGPIARC 571
>KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-associated protein| 9.9) (Ultrahigh sulfur keratin-associated protein 9.9) Length = 154 Score = 28.5 bits (62), Expect = 9.7 Identities = 21/58 (36%), Positives = 25/58 (43%) Frame = +2 Query: 290 PCCIPSTITTSNWSFSHRPLATSNRWGSRCISGPLVTTPLASCCGVISDCSILWGSSS 463 PCC PS +S RP N + C + T L+SCCG S C G SS Sbjct: 36 PCCQPSCCVSSCCQPCCRPACCQN---TCCRTTCCQPTCLSSCCGQTS-CGSSCGQSS 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,726,083 Number of Sequences: 219361 Number of extensions: 972510 Number of successful extensions: 2808 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2805 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)