Clone Name | rbart43b08 |
---|---|
Clone Library Name | barley_pub |
>gb|BT016485.1| Zea mays clone Contig318 mRNA sequence Length = 1267 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/103 (83%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 379 catcagcggtccactggtcaccaccccattggccagctgctgcggcgtaatcagtgattg 438 |||||| ||||||||||||||||||||| || ||||| || | ||||||||||||| Sbjct: 850 catcagaggtccactggtcaccaccccactgatcagctccttgg---taatcagtgattg 794 Query: 439 cagtatactctggggctccagcagcttcatcctcctgctcctt 481 | | | |||| ||||| |||||||||| |||||||||||||| Sbjct: 793 cggcaaactcaggggcaacagcagcttcctcctcctgctcctt 751
>gb|BT016521.1| Zea mays clone Contig354 mRNA sequence Length = 1275 Score = 58.0 bits (29), Expect = 3e-05 Identities = 85/103 (82%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 379 catcagcggtccactggtcaccaccccattggccagctgctgcggcgtaatcagtgattg 438 |||||| ||||||||||||||| ||||| || ||||| || ||||||||||| || Sbjct: 889 catcagaggtccactggtcaccgccccactgatcagctcct---tggtaatcagtgactg 833 Query: 439 cagtatactctggggctccagcagcttcatcctcctgctcctt 481 ||| | |||| ||||| |||||||||| |||||||||||||| Sbjct: 832 cagcaaactcaggggccgcagcagcttcctcctcctgctcctt 790
>gb|AY103617.1| Zea mays PCO143386 mRNA sequence Length = 1516 Score = 58.0 bits (29), Expect = 3e-05 Identities = 85/103 (82%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 379 catcagcggtccactggtcaccaccccattggccagctgctgcggcgtaatcagtgattg 438 |||||| ||||||||||||||| ||||| || ||||| || ||||||||||| || Sbjct: 928 catcagaggtccactggtcaccgccccactgatcagctcct---tggtaatcagtgactg 872 Query: 439 cagtatactctggggctccagcagcttcatcctcctgctcctt 481 ||| | |||| ||||| |||||||||| |||||||||||||| Sbjct: 871 cagcaaactcaggggccgcagcagcttcctcctcctgctcctt 829
>gb|BT016624.1| Zea mays clone Contig457 mRNA sequence Length = 1418 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 425 gtaatcagtgattgcagtatactctggggctccagcagcttcatcctcctgctcctt 481 ||||||||||||||| | | |||| ||||| | |||||||| |||||||||||||| Sbjct: 798 gtaatcagtgattgcggcaaactcaggggccgcggcagcttcctcctcctgctcctt 742
>gb|AY312923.1| Timmia megapolitana trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1469 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 716 cagtagcagccgcaacaggag 696
>gb|AY312922.1| Tetraplodon mnioides trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1500 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 707 cagtagcagccgcaacaggag 687
>gb|AY312919.1| Scouleria aquatica trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1406 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 623 cagtagcagccgcaacaggag 603
>gb|AY312918.1| Rhodobryum giganteum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1488 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 710 cagtagcagccgcaacaggag 690
>gb|AY312911.1| Orthotrichum lyellii trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1448 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 679 cagtagcagccgcaacaggag 659
>gb|AY312909.1| Oedipodium griffithianum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1486 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 717 cagtagcagccgcaacaggag 697
>gb|AY312908.1| Mnium hornum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1455 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 675 cagtagcagccgcaacaggag 655
>gb|AY312905.1| Hedwigia ciliata trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1517 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 729 cagtagcagccgcaacaggag 709
>gb|AY312901.1| Entosthodon laevis trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1426 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 636 cagtagcagccgcaacaggag 616
>gb|AY312897.1| Buxbaumia aphylla trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1441 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 624 cagtagcagccgcaacaggag 604
>gb|AY312896.1| Brachythecium salebrosum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 698 cagtagcagccgcaacaggag 678
>gb|AY312894.1| Aulacomnium turgidum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1493 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 718 cagtagcagccgcaacaggag 698
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 4318716 cctagcctaatcccagccttgagcagctggttg 4318748 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 4319128 cagtagcagctgggggagcagccacatcagaggtccactggtca 4319171
>gb|BC051413.1| Mus musculus calcium channel, voltage-dependent, alpha 1F subunit, mRNA (cDNA clone IMAGE:6493332), containing frame-shift errors Length = 6035 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cacgccagcctcccagccagt 241 ||||||||||||||||||||| Sbjct: 1416 cacgccagcctcccagccagt 1436
>gb|BC043482.1| Mus musculus calcium channel, voltage-dependent, alpha 1F subunit, mRNA (cDNA clone IMAGE:5369391), containing frame-shift errors Length = 6636 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cacgccagcctcccagccagt 241 ||||||||||||||||||||| Sbjct: 1843 cacgccagcctcccagccagt 1863
>gb|AY294643.1| Phalaris minor PsbA gene, partial cds; chloroplast gene for chloroplast product Length = 791 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 352 cagtagcagccgcaacaggag 332
>emb|AJ579852.2|MMU579852 Mus musculus mRNA for L-type dihydropyridine-sensitive calcium channel alpha-1f subunit (Cav1.4 gene), strain C57Bl6 Length = 5955 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cacgccagcctcccagccagt 241 ||||||||||||||||||||| Sbjct: 1399 cacgccagcctcccagccagt 1419
>emb|AL954248.1| Pan troglodytes chromosome 22 clone PTB-061A04 map 22q22.3, complete sequence Length = 162730 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 catccaccatcaccaccagca 323 ||||||||||||||||||||| Sbjct: 30340 catccaccatcaccaccagca 30320
>gb|AC007622.28| Homo sapiens 12 BAC RP11-864J10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121700 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 ccatccaccatcaccaccagc 322 ||||||||||||||||||||| Sbjct: 73415 ccatccaccatcaccaccagc 73395
>gb|AY211527.2| Phalaris minor PsbA gene, partial cds; chloroplast gene for chloroplast product Length = 791 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 352 cagtagcagccgcaacaggag 332
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 107781 cctagcctaatcccagccttgagcagctggttg 107749 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 107369 cagtagcagctgggggagcagccacatcagaggtccactggtca 107326
>dbj|AK044695.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930034B14 product:calcium channel, voltage-dependent, alpha 1F subunit, full insert sequence Length = 2560 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cacgccagcctcccagccagt 241 ||||||||||||||||||||| Sbjct: 1426 cacgccagcctcccagccagt 1446
>gb|BC057653.1| Mus musculus calcium channel, voltage-dependent, alpha 1F subunit, mRNA (cDNA clone IMAGE:4501329) Length = 3849 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cacgccagcctcccagccagt 241 ||||||||||||||||||||| Sbjct: 2467 cacgccagcctcccagccagt 2487
>gb|AF363674.1|AF363674 Lolium perenne herbicide binding protein D1 (psbA) mRNA, partial cds; chloroplast gene for chloroplast product Length = 945 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 301 cagtagcagccgcaacaggag 281
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 4318831 cctagcctaatcccagccttgagcagctggttg 4318863 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 4319243 cagtagcagctgggggagcagccacatcagaggtccactggtca 4319286
>ref|NM_019582.1| Mus musculus calcium channel, voltage-dependent, alpha 1F subunit (Cacna1f), mRNA Length = 6114 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cacgccagcctcccagccagt 241 ||||||||||||||||||||| Sbjct: 1447 cacgccagcctcccagccagt 1467
>gb|AF192497.1|AF192497 Mus musculus L-type dihydropyridine-sensitive calcium channel alpha-1f subunit (Cacna1f) mRNA, complete cds Length = 6114 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cacgccagcctcccagccagt 241 ||||||||||||||||||||| Sbjct: 1447 cacgccagcctcccagccagt 1467
>gb|AY163147.1| Plagiobryum zieri photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1477 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 692 cagtagcagccgcaacaggag 672
>gb|AY163146.1| Haplodontium reticulatum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1493 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 718 cagtagcagccgcaacaggag 698
>gb|AY163145.1| Haplodontium megalocarpum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1482 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 717 cagtagcagccgcaacaggag 697
>gb|AY163144.1| Bryum ruderale photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1506 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163143.1| Bryum radiculosum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1514 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 728 cagtagcagccgcaacaggag 708
>gb|AY163142.1| Bryum pseudotriquetrum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1490 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 715 cagtagcagccgcaacaggag 695
>gb|AY163141.1| Bryum pachytheca photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 654 cagtagcagccgcaacaggag 634
>gb|AY163140.1| Bryum orthothecium photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1510 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 729 cagtagcagccgcaacaggag 709
>gb|AY163139.1| Bryum meesioides photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1377 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 721 cagtagcagccgcaacaggag 701
>gb|AY163138.1| Bryum lisae photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1433 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 652 cagtagcagccgcaacaggag 632
>gb|AY163137.1| Bryum gemmiferum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1429 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 641 cagtagcagccgcaacaggag 621
>gb|AY163136.1| Bryum funckii photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1494 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163135.1| Bryum donianum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1507 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 722 cagtagcagccgcaacaggag 702
>gb|AY163134.1| Bryum cyclophyllum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1504 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 718 cagtagcagccgcaacaggag 698
>gb|AY163133.1| Bryum coronatum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1477 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 720 cagtagcagccgcaacaggag 700
>gb|AY163132.1| Bryum clavatum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1481 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 720 cagtagcagccgcaacaggag 700
>gb|AY163131.1| Bryum cellulare photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1446 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 659 cagtagcagccgcaacaggag 639
>gb|AY163130.1| Bryum caucasicum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1424 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 636 cagtagcagccgcaacaggag 616
>gb|AY163128.1| Bryum caespiticium photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1458 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 679 cagtagcagccgcaacaggag 659
>gb|AY163127.1| Bryum bicolor photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1491 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163126.1| Bryum argenteum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1446 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 659 cagtagcagccgcaacaggag 639
>gb|AY163125.1| Bryum alpinum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163124.1| Bryum algovicum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1482 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 700 cagtagcagccgcaacaggag 680
>gb|AY163122.1| Brachymenium preissianum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1500 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 718 cagtagcagccgcaacaggag 698
>gb|AY163121.1| Brachymenium philonotula photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1504 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163119.1| Brachymenium acuminatum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1509 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 721 cagtagcagccgcaacaggag 701
>gb|AY163118.1| Anomobryum prostratum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 721 cagtagcagccgcaacaggag 701
>gb|AY163117.1| Anomobryum julaceum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1511 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 726 cagtagcagccgcaacaggag 706
>gb|AY163116.1| Anomobryum humillimum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1446 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 676 cagtagcagccgcaacaggag 656
>gb|AY163115.1| Anomobryum conicum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1496 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>dbj|AK104842.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F12, full insert sequence Length = 1310 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 1008 cctagcctaatcccagccttgagcagctggttg 976 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 847 cagtagcagctgggggagcagccacatcagaggtccactggtca 804
>dbj|AK104620.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F12, full insert sequence Length = 1276 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 1008 cctagcctaatcccagccttgagcagctggttg 976 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 847 cagtagcagctgggggagcagccacatcagaggtccactggtca 804
>dbj|AK104286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D06, full insert sequence Length = 1223 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 1008 cctagcctaatcccagccttgagcagctggttg 976 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 847 cagtagcagctgggggagcagccacatcagaggtccactggtca 804
>dbj|AK070905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065M10, full insert sequence Length = 1320 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 1018 cctagcctaatcccagccttgagcagctggttg 986 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 857 cagtagcagctgggggagcagccacatcagaggtccactggtca 814
>dbj|AK066899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K05, full insert sequence Length = 1182 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 956 cctagcctaatcccagccttgagcagctggttg 924 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 795 cagtagcagctgggggagcagccacatcagaggtccactggtca 752
>dbj|AK061289.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A03, full insert sequence Length = 1144 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 188 cctagtctactcccagccttgagcagcgggttg 220 ||||| ||| ||||||||||||||||| ||||| Sbjct: 929 cctagcctaatcccagccttgagcagctggttg 897 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 768 cagtagcagctgggggagcagccacatcagaggtccactggtca 725
>gb|AY562223.2| Plagiomnium ellipticum psbA-trnK intergenic spacer, partial sequence; photosystem II protein D1 (psbA) gene, complete cds; and psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 1407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 683 cagtagcagccgcaacaggag 663
>gb|AY562221.2| Plagiomnium insigne psbA-trnK intergenic spacer, partial sequence; photosystem II protein D1 (psbA) gene, complete cds; and psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 1407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 683 cagtagcagccgcaacaggag 663
>gb|AY562222.2| Plagiomnium medium psbA-trnK intergenic spacer, partial sequence; photosystem II protein D1 (psbA) gene, complete cds; and psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 1407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 683 cagtagcagccgcaacaggag 663
>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence Length = 136080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 ctggtcaccaccccattggcc 412 ||||||||||||||||||||| Sbjct: 79472 ctggtcaccaccccattggcc 79492
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 cagtagcagccgcaacaggag 258 ||||||||||||||||||||| Sbjct: 53815 cagtagcagccgcaacaggag 53835
>ref|NM_001024580.1| Gallus gallus vitrin (VIT), mRNA Length = 2790 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cccatccaccatcaccacca 320 |||||||||||||||||||| Sbjct: 1472 cccatccaccatcaccacca 1453
>ref|XM_470555.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 355 cagtaacaggtgggggagcaggtgcatcagcggtccactggtca 398 ||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 763 cagtagcagctgggggagcagccacatcagaggtccactggtca 720
>ref|XM_525845.1| PREDICTED: Pan troglodytes similar to UDP-glucuronate decarboxylase 1 (LOC470464), mRNA Length = 2829 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 63 cagcagcttcatcctcctgc 44
>gb|BT015952.1| Drosophila melanogaster SD17694 full insert cDNA Length = 1749 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ttggccagctgctgcggcgt 426 |||||||||||||||||||| Sbjct: 1171 ttggccagctgctgcggcgt 1152
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 92873 ccaccatcaccaccagcaac 92892
>gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, complete sequence Length = 227074 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cattcatgcctcacaaaata 152 |||||||||||||||||||| Sbjct: 218715 cattcatgcctcacaaaata 218734
>ref|XM_614676.2| PREDICTED: Bos taurus similar to UDP-glucuronate decarboxylase 1 (LOC534788), mRNA Length = 1263 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 63 cagcagcttcatcctcctgc 44
>gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome 8, complete sequence Length = 219629 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 15569 ccaccatcaccaccagcaac 15588
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence Length = 234127 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cagtctccctctccctcatc 31 |||||||||||||||||||| Sbjct: 96968 cagtctccctctccctcatc 96987
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 165413 ccaccatcaccaccagcaac 165394
>ref|XM_658752.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6240.2) partial mRNA Length = 903 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 caccaccagcaactggagct 332 |||||||||||||||||||| Sbjct: 15 caccaccagcaactggagct 34
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccatcaccaccagcaactgg 328 |||||||||||||||||||| Sbjct: 1410941 ccatcaccaccagcaactgg 1410960
>gb|AC132576.3| Mus musculus BAC clone RP24-444F2 from chromosome 16, complete sequence Length = 135862 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 72289 ccaccatcaccaccagcaac 72308
>gb|AY145052.1| Rattus norvegicus seryl-aminoacyl-tRNA synthetase BLES02 mRNA, partial cds Length = 533 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ccatccaccatcaccaccag 321 |||||||||||||||||||| Sbjct: 21 ccatccaccatcaccaccag 2
>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence Length = 162693 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 143066 ccaccatcaccaccagcaac 143047
>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence Length = 235023 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cagtctccctctccctcatc 31 |||||||||||||||||||| Sbjct: 70888 cagtctccctctccctcatc 70869
>gb|AC108942.4| Mus musculus BAC clone RP23-7M11 from 18, complete sequence Length = 223041 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 184443 ccaccatcaccaccagcaac 184462
>ref|NM_025076.3| Homo sapiens UDP-glucuronate decarboxylase 1 (UXS1), mRNA Length = 2132 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 161 cagcagcttcatcctcctgc 142
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tctccctctccctcatccca 34 |||||||||||||||||||| Sbjct: 55024 tctccctctccctcatccca 55043
>gb|AY358541.1| Homo sapiens clone DNA111750 UXS1 (UNQ2538) mRNA, complete cds Length = 2024 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 112 cagcagcttcatcctcctgc 93
>gb|AC102225.9| Mus musculus chromosome 18, clone RP24-406O24, complete sequence Length = 208106 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 120901 ccaccatcaccaccagcaac 120882
>emb|AL512503.14| Human DNA sequence from clone RP11-323K8 on chromosome 1 Contains part of the NOTCH2 gene for Notch homolog 2 (Drosophila), complete sequence Length = 109612 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 taatcagtgattgcagtata 445 |||||||||||||||||||| Sbjct: 5704 taatcagtgattgcagtata 5685
>emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chromosome 9q34.11-34.2 Contains a NADH dehydrogenase 3, mitochondrial (MTND3) pseudogene, complete sequence Length = 157790 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gtctccctctccctcatccc 33 |||||||||||||||||||| Sbjct: 73685 gtctccctctccctcatccc 73666
>emb|AL020991.1|HS884M20 Human DNA sequence from clone RP5-884M20 on chromosome Xp11.21 Contains the ALAS2 gene for aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia), the APEX2 gene for APEX nuclease (apurinic/apyrimidinic endonuclease) 2, the 5' end of the PFKFB1 gene for 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 and a CpG island, complete sequence Length = 114173 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gtctccctctccctcatccc 33 |||||||||||||||||||| Sbjct: 102803 gtctccctctccctcatccc 102784
>emb|AJ401088.1|GGA401088 Gallus gallus mRNA for MOX-2 protein Length = 1891 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 265 ccaccatcaccaccagcaac 284
>emb|AL645985.30| Mouse DNA sequence from clone DN-240H8 on chromosome 3 Contains part of a novel gene, a ribosomal protein L36 (Rpl36) pseudogene and a pseudogene similar to part of ribosomal protein S2 (Rps2), complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 122980 ccaccatcaccaccagcaac 122961
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ttggccagctgctgcggcgt 426 |||||||||||||||||||| Sbjct: 17903 ttggccagctgctgcggcgt 17922
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gccagctgctgcggcgtaat 429 |||||||||||||||||||| Sbjct: 1735975 gccagctgctgcggcgtaat 1735956
>dbj|AK122696.1| Homo sapiens cDNA FLJ16164 fis, clone BRCAN2027150 Length = 1988 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 126 cagcagcttcatcctcctgc 107
>dbj|AK075170.1| Homo sapiens cDNA FLJ90689 fis, clone PLACE1006219, weakly similar to PUTATIVE UDP-GLUCOSE 4-EPIMERASE (EC 5.1.3.2) Length = 2049 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 123 cagcagcttcatcctcctgc 104
>dbj|AK075120.1| Homo sapiens cDNA FLJ90639 fis, clone PLACE1003845, highly similar to UDP-glucuronate decarboxylase 1 Length = 2037 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 123 cagcagcttcatcctcctgc 104
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ttggccagctgctgcggcgt 426 |||||||||||||||||||| Sbjct: 68330 ttggccagctgctgcggcgt 68311
>emb|CR592836.1| full-length cDNA clone CS0DI087YJ08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1758 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 101 cagcagcttcatcctcctgc 82
>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence Length = 185624 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 atcctaaaacacaagttttt 89 |||||||||||||||||||| Sbjct: 65483 atcctaaaacacaagttttt 65464
>ref|NM_132081.2| Drosophila melanogaster CG15896-RA (CG15896), mRNA Length = 1750 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ttggccagctgctgcggcgt 426 |||||||||||||||||||| Sbjct: 1178 ttggccagctgctgcggcgt 1159
>gb|AY071486.1| Drosophila melanogaster RE55427 full length cDNA Length = 1759 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ttggccagctgctgcggcgt 426 |||||||||||||||||||| Sbjct: 1177 ttggccagctgctgcggcgt 1158
>tpg|BK005738.1| TPA: TPA_exp: Drosophila melanogaster dosage compensation complex binding fragment 5, complete sequence Length = 4396 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ttggccagctgctgcggcgt 426 |||||||||||||||||||| Sbjct: 587 ttggccagctgctgcggcgt 568
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tctccctctccctcatccca 34 |||||||||||||||||||| Sbjct: 182651 tctccctctccctcatccca 182670
>gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome 13, complete sequence Length = 200650 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 caccatcaccaccagcaact 326 |||||||||||||||||||| Sbjct: 137653 caccatcaccaccagcaact 137634
>dbj|AB185956.1| Gallus gallus AKH mRNA for Akhirin, complete cds Length = 2790 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cccatccaccatcaccacca 320 |||||||||||||||||||| Sbjct: 1472 cccatccaccatcaccacca 1453
>gb|AC154770.2| Mus musculus BAC clone RP24-448C20 from chromosome 16, complete sequence Length = 196851 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 90226 ccaccatcaccaccagcaac 90207
>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence Length = 170801 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 164963 cagcagcttcatcctcctgc 164982
>gb|AC084445.1|AC084445 Caenorhabditis briggsae cosmid CB018A07, complete sequence Length = 62584 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 catctagaaaatcctaaaac 79 |||||||||||||||||||| Sbjct: 25907 catctagaaaatcctaaaac 25888
>ref|NM_001007606.1| Rattus norvegicus seryl-aminoacyl-tRNA synthetase 1 (Sars1), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ccatccaccatcaccaccag 321 |||||||||||||||||||| Sbjct: 594 ccatccaccatcaccaccag 575
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 ggggctccagcagcttcatc 469 |||||||||||||||||||| Sbjct: 1276092 ggggctccagcagcttcatc 1276111
>emb|Z83821.1|HS296K21 Human DNA sequence from clone RP1-296K21 on chromosome Xq13, complete sequence Length = 111994 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gtctccctctccctcatccc 33 |||||||||||||||||||| Sbjct: 101290 gtctccctctccctcatccc 101271
>gb|BC009819.2| Homo sapiens UDP-glucuronate decarboxylase 1, mRNA (cDNA clone MGC:14862 IMAGE:3843312), complete cds Length = 2031 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 102 cagcagcttcatcctcctgc 83
>gb|BC061765.1| Rattus norvegicus seryl-aminoacyl-tRNA synthetase 1, mRNA (cDNA clone MGC:72629 IMAGE:5620893), complete cds Length = 1920 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ccatccaccatcaccaccag 321 |||||||||||||||||||| Sbjct: 594 ccatccaccatcaccaccag 575
>emb|Z78198.1|CEF55C5 Caenorhabditis elegans Cosmid F55C5, complete sequence Length = 40553 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 atccaccatcaccaccagca 323 |||||||||||||||||||| Sbjct: 36968 atccaccatcaccaccagca 36987
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ttggccagctgctgcggcgt 426 |||||||||||||||||||| Sbjct: 58189 ttggccagctgctgcggcgt 58170
>gb|AC102209.11| Mus musculus chromosome 3, clone RP24-280F5, complete sequence Length = 170723 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 110106 ccaccatcaccaccagcaac 110125
>ref|NM_001005427.1| Gallus gallus mesenchyme homeobox 2 (MEOX2), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 265 ccaccatcaccaccagcaac 284
>emb|AL591388.9| Zebrafish DNA sequence from clone BUSM1-255P14 in linkage group 7, complete sequence Length = 97239 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 tctccctctccctcatcccaatgt 38 ||||||||||||| |||||||||| Sbjct: 48409 tctccctctcccttatcccaatgt 48386
>gb|AF030429.1|AF030429 Canis familiaris dentatorubro-pallidoluysian atrophy protein (DRPLA) gene, exon 5 and partial cds Length = 324 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 72 ccaccatcaccaccagcaac 91
>emb|CR936437.14| Zebrafish DNA sequence from clone CH211-197I23 in linkage group 3, complete sequence Length = 96056 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 tctccctctccctcatcccaatgt 38 ||||||||||||| |||||||||| Sbjct: 78501 tctccctctcccttatcccaatgt 78478
>emb|AL845519.6| Mouse DNA sequence from clone RP23-295F2 on chromosome 2, complete sequence Length = 164578 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cagtctccctctccctcatc 31 |||||||||||||||||||| Sbjct: 36981 cagtctccctctccctcatc 36962
>gb|AY147934.1| Homo sapiens UDP-glucuronic acid decarboxylase mRNA, complete cds Length = 2077 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcagcttcatcctcctgc 476 |||||||||||||||||||| Sbjct: 128 cagcagcttcatcctcctgc 109
>emb|AL606749.13| Mouse DNA sequence from clone RP23-325J22 on chromosome 3, complete sequence Length = 89111 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccaccatcaccaccagcaac 325 |||||||||||||||||||| Sbjct: 81163 ccaccatcaccaccagcaac 81144 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,911,800 Number of Sequences: 3902068 Number of extensions: 4911800 Number of successful extensions: 205723 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 205204 Number of HSP's gapped (non-prelim): 519 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)