Clone Name | rbart43b05 |
---|---|
Clone Library Name | barley_pub |
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacgcacacacgcgagcag 66 |||||||||||||||||||| Sbjct: 469966 acacgcacacacgcgagcag 469947
>ref|XM_867958.1| PREDICTED: Bos taurus similar to CG4813-PA (LOC616005), mRNA Length = 2162 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 cacgaacacgcacacacgc 60 ||||||||||||||||||| Sbjct: 1373 cacgaacacgcacacacgc 1391
>gb|AC124437.4| Mus musculus BAC clone RP24-257N6 from chromosome 3, complete sequence Length = 149145 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 gaagtctcttattacacta 30 ||||||||||||||||||| Sbjct: 32755 gaagtctcttattacacta 32773
>gb|AC132600.3| Mus musculus BAC clone RP24-134A5 from chromosome 3, complete sequence Length = 160339 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 gaagtctcttattacacta 30 ||||||||||||||||||| Sbjct: 150677 gaagtctcttattacacta 150695
>emb|AL831784.17| Human DNA sequence from clone RP13-436F16 on chromosome 1 Contains the 5' end of the MMEL2 gene for membrane metallo-endopeptidase-like 2, a novel gene and three CpG islands, complete sequence Length = 79425 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacgcacacacgcgagca 65 ||||||||||||||||||| Sbjct: 7296 acacgcacacacgcgagca 7278
>emb|AL161945.31| Human DNA sequence from clone RP4-606D23 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 70299 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 38 aaagcacgaacacgcacacacgc 60 ||||||||| ||||||||||||| Sbjct: 39792 aaagcacgagcacgcacacacgc 39770
>emb|AL021815.3|SPBC8E4 S.pombe chromosome II cosmid c8E4 Length = 35922 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 cagaaattaacagctaaca 82 ||||||||||||||||||| Sbjct: 20560 cagaaattaacagctaaca 20578
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 aaattaacagctaacatac 85 ||||||||||||||||||| Sbjct: 65877 aaattaacagctaacatac 65895
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome Length = 305107 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 acccactgatgaagtctct 20 ||||||||||||||||||| Sbjct: 47165 acccactgatgaagtctct 47147
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 aaattaacagctaacatac 85 ||||||||||||||||||| Sbjct: 20188142 aaattaacagctaacatac 20188160
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 39 aagcacgaacacgcacacacgcg 61 |||||||||||||||| |||||| Sbjct: 24173936 aagcacgaacacgcacgcacgcg 24173914
>gb|AF369029.2| White spot syndrome virus, complete genome Length = 292967 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 acccactgatgaagtctct 20 ||||||||||||||||||| Sbjct: 96117 acccactgatgaagtctct 96099
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 39 aagcacgaacacgcacacacgcg 61 |||||||||||||||| |||||| Sbjct: 149758 aagcacgaacacgcacgcacgcg 149736
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome Length = 307287 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 acccactgatgaagtctct 20 ||||||||||||||||||| Sbjct: 80746 acccactgatgaagtctct 80728
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 aaattaacagctaacatac 85 ||||||||||||||||||| Sbjct: 20199418 aaattaacagctaacatac 20199436
>gb|U92007.1|WSU92007 White spot syndrome baculovirus, partial DNA sequence Length = 2424 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 acccactgatgaagtctct 20 ||||||||||||||||||| Sbjct: 54 acccactgatgaagtctct 36
>emb|AL844854.6| Mouse DNA sequence from clone RP23-368I1 on chromosome 2, complete sequence Length = 185135 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacgcacacacgcgagca 65 ||||||||||||||||||| Sbjct: 6328 acacgcacacacgcgagca 6346 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 692,275 Number of Sequences: 3902068 Number of extensions: 692275 Number of successful extensions: 57766 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57641 Number of HSP's gapped (non-prelim): 125 length of query: 94 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 73 effective length of database: 17,151,101,840 effective search space: 1252030434320 effective search space used: 1252030434320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)