>dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds
          Length = 1053

 Score =  184 bits (93), Expect = 6e-44
 Identities = 130/141 (92%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                        
Query: 28   taaacatccacattacatctagcagcatccatgggttcgcaaatcaacaaacatcgggca 87
            ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||
Sbjct: 1036 taaacatccacattacatctagcagcaaccatgggttcacaattcaacaaacatcaggca 977

                                                                        
Query: 88   aaacttaaaaaagatggttccaggaacatagatctatatccttgcagataactggctata 147
            ||| ||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||
Sbjct: 976  aaatttaaaaacgatggttccagaaacatagttctatatcctt-cagataactggctata 918

                                 
Query: 148  gcaaaacgactcaatgcctca 168
            ||||||||| |||| ||||||
Sbjct: 917  gcaaaacgaatcaacgcctca 897

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 115    atagatctatatccttgcagataactggctatagcaaaac 154
              |||| |||||||||||||| | |||| |||||||||||||
Sbjct: 316896 atagttctatatccttgcaaacaactcgctatagcaaaac 316935



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 40/47 (85%)
 Strand = Plus / Plus

                                                             
Query: 21     aataaggtaaacatccacattacatctagcagcatccatgggttcgc 67
              |||||||||||||  | ||||||| |||||||||  |||| ||||||
Sbjct: 316793 aataaggtaaacagtcgcattacagctagcagcaaacatgagttcgc 316839

>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 115   atagatctatatccttgcagataactggctatagcaaaac 154
             |||| |||||||||||||| | |||| |||||||||||||
Sbjct: 45680 atagttctatatccttgcaaacaactcgctatagcaaaac 45719



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 40/47 (85%)
 Strand = Plus / Plus

                                                            
Query: 21    aataaggtaaacatccacattacatctagcagcatccatgggttcgc 67
             |||||||||||||  | ||||||| |||||||||  |||| ||||||
Sbjct: 45577 aataaggtaaacagtcgcattacagctagcagcaaacatgagttcgc 45623

>dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B09, full
           insert sequence
          Length = 1016

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 115 atagatctatatccttgcagataactggctatagcaaaac 154
           |||| |||||||||||||| | |||| |||||||||||||
Sbjct: 957 atagttctatatccttgcaaacaactcgctatagcaaaac 918

>dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093E13, full
           insert sequence
          Length = 1157

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 115 atagatctatatccttgcagataactggctatagcaaaac 154
           |||| |||||||||||||| | |||| |||||||||||||
Sbjct: 961 atagttctatatccttgcaaacaactcgctatagcaaaac 922



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 40/47 (85%)
 Strand = Plus / Minus

                                                           
Query: 21   aataaggtaaacatccacattacatctagcagcatccatgggttcgc 67
            |||||||||||||  | ||||||| |||||||||  |||| ||||||
Sbjct: 1064 aataaggtaaacagtcgcattacagctagcagcaaacatgagttcgc 1018

>dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D06, full
           insert sequence
          Length = 1079

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 115 atagatctatatccttgcagataactggctatagcaaaac 154
           |||| |||||||||||||| | |||| |||||||||||||
Sbjct: 953 atagttctatatccttgcaaacaactcgctatagcaaaac 914



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 40/47 (85%)
 Strand = Plus / Minus

                                                           
Query: 21   aataaggtaaacatccacattacatctagcagcatccatgggttcgc 67
            |||||||||||||  | ||||||| |||||||||  |||| ||||||
Sbjct: 1056 aataaggtaaacagtcgcattacagctagcagcaaacatgagttcgc 1010

>emb|AL935192.10| Zebrafish DNA sequence from clone CH211-252B2, complete sequence
          Length = 192649

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     actcaaaatagcacttaataa 25
             |||||||||||||||||||||
Sbjct: 34210 actcaaaatagcacttaataa 34230

>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     acaaacatcgggcaaaacttaaaa 97
              |||||||||| |||||||||||||
Sbjct: 458641 acaaacatcgtgcaaaacttaaaa 458664

>gb|AC115064.9| Mus musculus chromosome 1, clone RP24-401B18, complete sequence
          Length = 184893

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    aaacatccacattacatcta 48
             ||||||||||||||||||||
Sbjct: 87241 aaacatccacattacatcta 87260

>ref|XM_567829.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNK01550) partial mRNA
          Length = 1303

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  acaaacatcgggcaaaacttaaaa 97
           |||||||||| |||||||||||||
Sbjct: 217 acaaacatcgtgcaaaacttaaaa 194

>emb|AL031904.1|HS103M22 Human DNA sequence from clone RP1-103M22 on chromosome 6p24 Contains a
             CpG island, complete sequence
          Length = 140709

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   tagatctatatccttgcaga 135
             ||||||||||||||||||||
Sbjct: 55350 tagatctatatccttgcaga 55331

>emb|BX908401.14| Zebrafish DNA sequence from clone DKEY-53F14 in linkage group 18,
              complete sequence
          Length = 172346

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 83     gggcaaaacttaaaaaagatggtt 106
              ||||||||| ||||||||||||||
Sbjct: 150529 gggcaaaacctaaaaaagatggtt 150552

>gb|AC009806.9| Homo sapiens chromosome 11, clone RP11-51B23, complete sequence
          Length = 175223

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     cttaaaaaagatggttccag 110
              ||||||||||||||||||||
Sbjct: 158366 cttaaaaaagatggttccag 158385

>gb|AC110033.9| Mus musculus chromosome 1, clone RP23-117O18, complete sequence
          Length = 260404

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   aaacatccacattacatcta 48
            ||||||||||||||||||||
Sbjct: 1569 aaacatccacattacatcta 1550

>gb|AC105168.8| Mus musculus chromosome 1, clone RP24-537H9, complete sequence
          Length = 148164

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ttccaggaacatagatctat 124
              ||||||||||||||||||||
Sbjct: 128012 ttccaggaacatagatctat 127993

>gb|AC108796.10| Mus musculus chromosome 1, clone RP23-349L18, complete sequence
          Length = 188713

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    aaacatccacattacatcta 48
             ||||||||||||||||||||
Sbjct: 16088 aaacatccacattacatcta 16069

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 9       aaaatagcacttaataaggt 28
               ||||||||||||||||||||
Sbjct: 1276929 aaaatagcacttaataaggt 1276948

>gb|AC132886.18| Mus musculus chromosome 13, clone RP24-267I21, complete sequence
          Length = 184315

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     taaggtaaacatccacatt 41
              |||||||||||||||||||
Sbjct: 138651 taaggtaaacatccacatt 138669

>gb|AC170260.2| Mus musculus BAC clone RP24-347N1 from chromosome 5, complete sequence
          Length = 165011

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 111   gaacatagatctatatccttgca 133
             |||||||||||||||| ||||||
Sbjct: 32019 gaacatagatctatattcttgca 32041

>gb|BT016261.1| Zea mays clone Contig94 mRNA sequence
          Length = 1116

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 120 tctatatccttgcagataa 138
           |||||||||||||||||||
Sbjct: 971 tctatatccttgcagataa 953

>gb|AC123738.8| Mus musculus, clone RP24-67N17, complete sequence
          Length = 163442

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 104    gttccaggaacatagatct 122
              |||||||||||||||||||
Sbjct: 100158 gttccaggaacatagatct 100176

>gb|AC132322.3| Mus musculus BAC clone RP24-262F3 from chromosome 13, complete
            sequence
          Length = 155179

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 23   taaggtaaacatccacatt 41
            |||||||||||||||||||
Sbjct: 5596 taaggtaaacatccacatt 5614

>ref|XM_449452.1| Candida glabrata CBS138 hypothetical protein (CAGL0M02431g) partial
           mRNA
          Length = 1317

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 97  aaagatggttccaggaaca 115
           |||||||||||||||||||
Sbjct: 173 aaagatggttccaggaaca 155

>gb|AC114918.4| Mus musculus BAC clone RP23-86N20 from 5, complete sequence
          Length = 165767

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 111    gaacatagatctatatccttgca 133
              |||||||||||||||| ||||||
Sbjct: 150826 gaacatagatctatattcttgca 150848

>emb|AL731567.6| Human DNA sequence from clone RP11-67C2 on chromosome 10 Contains the
             ALOX5 gene for arachidonate 5-lipoxygenase, a novel gene,
             the 3' end of a gene for cellular modulator of immune
             recognition (c-MIR) and five CpG islands, complete
             sequence
          Length = 129266

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 120   tctatatccttgcagataactgg 142
             ||||||||||| |||||||||||
Sbjct: 81473 tctatatccttacagataactgg 81451

>gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, complete sequence
          Length = 223952

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    aaaaaagatggttccagga 112
             |||||||||||||||||||
Sbjct: 38698 aaaaaagatggttccagga 38716

>gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, complete sequence
          Length = 195494

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 84    ggcaaaacttaaaaaagat 102
             |||||||||||||||||||
Sbjct: 83257 ggcaaaacttaaaaaagat 83239

>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 97     aaagatggttccaggaaca 115
              |||||||||||||||||||
Sbjct: 286323 aaagatggttccaggaaca 286341

>gb|AC027820.12| Homo sapiens chromosome 17, clone RP11-198F11, complete sequence
          Length = 154353

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 84     ggcaaaacttaaaaaagat 102
              |||||||||||||||||||
Sbjct: 122847 ggcaaaacttaaaaaagat 122829

>gb|AC152395.9| Mus musculus chromosome 15, clone RP23-391D2, complete sequence
          Length = 210006

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 94     aaaaaagatggttccagga 112
              |||||||||||||||||||
Sbjct: 150327 aaaaaagatggttccagga 150345

>gb|AC018525.8| Homo sapiens chromosome 8, clone RP11-3J13, complete sequence
          Length = 150052

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 93    taaaaaagatggttccaggaaca 115
             ||||||||||||||||| |||||
Sbjct: 58703 taaaaaagatggttccatgaaca 58681

>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 68      aaatcaacaaacatcgggc 86
               |||||||||||||||||||
Sbjct: 3326122 aaatcaacaaacatcgggc 3326104

>gb|AC093671.3| Homo sapiens BAC clone RP11-542P2 from 4, complete sequence
          Length = 186370

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     tagcagcatccatgggttc 65
              |||||||||||||||||||
Sbjct: 123939 tagcagcatccatgggttc 123921

>gb|AC005300.10| Homo sapiens chromosome 22 clone p143i13 map 22q11, complete sequence
          Length = 101269

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    ttaataaggtaaacatcca 37
             |||||||||||||||||||
Sbjct: 18761 ttaataaggtaaacatcca 18779

>gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 in CES region, complete
              sequence
          Length = 193159

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     ttaataaggtaaacatcca 37
              |||||||||||||||||||
Sbjct: 146822 ttaataaggtaaacatcca 146840

>gb|AC132113.3| Mus musculus BAC clone RP24-217M2 from chromosome 3, complete sequence
          Length = 177519

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 96    aaaagatggttccaggaac 114
             |||||||||||||||||||
Sbjct: 67726 aaaagatggttccaggaac 67744

>dbj|AP005354.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1159C3, complete
             sequence
          Length = 133276

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 93    taaaaaagatggttccaggaaca 115
             ||||||||||||||||| |||||
Sbjct: 10938 taaaaaagatggttccatgaaca 10916

>gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA, complete cds
          Length = 1090

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 120 tctatatccttgcagataa 138
           |||||||||||||||||||
Sbjct: 950 tctatatccttgcagataa 932


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,524,387
Number of Sequences: 3902068
Number of extensions: 1524387
Number of successful extensions: 110979
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110797
Number of HSP's gapped (non-prelim): 181
length of query: 168
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 146
effective length of database: 17,147,199,772
effective search space: 2503491166712
effective search space used: 2503491166712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)