>ARHG1_RAT (Q9Z1I6) Rho guanine nucleotide exchange factor 1 (Lbc's second|
           cousin)
          Length = 919

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 57  QSYHVYRQAGAHHLSFPFFCILLLFTSGDRRGACPSSAGKPTPTPTRSR 203
           Q Y +  Q  +   S+   C L+  T+G  +   P+S  KP P+P+ +R
Sbjct: 734 QIYELVAQTSSERKSW---CALITETAGSLKVPAPASRPKPRPSPSSTR 779

>MATK_CHAGO (Q7YKY4) Maturase K (Intron maturase)|
          Length = 516

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +2

Query: 11  WSDQKKN*NEAMHAVAILPCIQASRSTSSIFSFLLHPIIIYIWGPKGGLPI 163
           W  QK   N+        PCI   RS  S F FL + II  IW   G + +
Sbjct: 111 WQHQKTRKND--------PCILIHRSIQSTFPFLENKIIHCIWIIHGNIQL 153

>ISPG_CHLTE (Q8KG23) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 746

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -3

Query: 367 ERPSGGGRQLPLRDGPSRHVDATNARRPSPSVDDAGLPGPHDA 239
           ER S G  QLP           + +RRPS S+D AG+P   DA
Sbjct: 376 ERKSAGHVQLPFEP-------FSYSRRPSISIDGAGIPVGGDA 411

>ARHG1_HUMAN (Q92888) Rho guanine nucleotide exchange factor 1 (p115-RhoGEF)|
           (p115RhoGEF) (115 kDa guanine nucleotide exchange
           factor) (Sub1.5)
          Length = 912

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 111 FCILLLFTSGDRRGACPSSAGKPTPTPTRSR 203
           +C L+  T+G  +   P+S  KP P+P+ +R
Sbjct: 751 WCALITETAGSLKVPAPASRPKPRPSPSSTR 781

>YUAZ_ECOLI (P08868) Hypothetical protein yuaZ|
          Length = 90

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 353 GRQATSTSGWALQACRCHQCPPPVT 279
           GR  T T    +Q CRC + P PVT
Sbjct: 32  GRAGTLTGLHPMQVCRCRRPPHPVT 56

>BAIP3_HUMAN (O94812) BAI1-associated protein 3 (BAP3)|
          Length = 1187

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 276 EGDGRRALVASTCLEGPSRSGSCLPP 353
           +G+GR+ L    CLE P RSGS  PP
Sbjct: 97  KGEGRQGL---PCLEVPLRSGSPAPP 119

>STON1_MOUSE (Q8CDJ8) Stonin-1 (Stoned B-like factor)|
          Length = 730

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 364 RPSGGGRQLP-LRDGPSRHVDATNARRPSPSVDDAGLPGP 248
           RP+G    LP LRD PS    A++    SP VD    PGP
Sbjct: 36  RPNGLKLTLPTLRDPPSTPSSASSTPLSSPMVDFYFSPGP 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,014,406
Number of Sequences: 219361
Number of extensions: 877662
Number of successful extensions: 2379
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2378
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)