Clone Name | rbart43a10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC108773.9| Mus musculus chromosome 5, clone RP23-118L1, complete sequence Length = 222706 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cctcactatcttattcagtt 30 |||||||||||||||||||| Sbjct: 36122 cctcactatcttattcagtt 36103
>emb|AL596132.7| Human DNA sequence from clone RP11-30A1 on chromosome 9 Contains part of the NTRK2 gene for Neurotrophic tyrosine kinase, receptor, type 2 (TRKB), complete sequence Length = 124156 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cacctaggccttggccccaa 120 |||||||||||||||||||| Sbjct: 23969 cacctaggccttggccccaa 23950
>dbj|AP000056.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 27/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aaaatccataggcttggcca 138 |||||||||||||||||||| Sbjct: 40661 aaaatccataggcttggcca 40642
>dbj|BS000192.1| Pan troglodytes chromosome 22 clone:PTB-125M11, map 22, complete sequences Length = 189269 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aaaatccataggcttggcca 138 |||||||||||||||||||| Sbjct: 63845 aaaatccataggcttggcca 63826
>gb|AF074095.1|AF074095 Salvelinus namaycush clone A1 intergenic spacer region, partial sequence Length = 3114 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tatcttattcagttccggcc 36 |||||||||||||||||||| Sbjct: 1853 tatcttattcagttccggcc 1872
>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105 Length = 340000 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aaaatccataggcttggcca 138 |||||||||||||||||||| Sbjct: 321532 aaaatccataggcttggcca 321513
>dbj|AP000330.3| Homo sapiens genomic DNA, chromosome 21 clone:RP1-140K16, complete sequence Length = 170368 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aaaatccataggcttggcca 138 |||||||||||||||||||| Sbjct: 67121 aaaatccataggcttggcca 67102
>dbj|AP000171.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 7/9, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aaaatccataggcttggcca 138 |||||||||||||||||||| Sbjct: 31291 aaaatccataggcttggcca 31272 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,762,217 Number of Sequences: 3902068 Number of extensions: 1762217 Number of successful extensions: 28079 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 28070 Number of HSP's gapped (non-prelim): 9 length of query: 308 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 286 effective length of database: 17,147,199,772 effective search space: 4904099134792 effective search space used: 4904099134792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)