>TR150_XENLA (Q5BJ39) Thyroid hormone receptor-associated protein 3 (Thyroid|
           hormone receptor-associated protein complex 150 kDa
           component) (Trap150)
          Length = 951

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 303 LDISEFLNLNNHGGKARSFFSVRIRSWSWGWG 398
           L   +F+  N  GG+AR  F  R R   WG G
Sbjct: 811 LGTKDFVGPNERGGRARGTFQFRARGRGWGRG 842

>TR150_RAT (Q5M7V8) Thyroid hormone receptor-associated protein 3 (Thyroid|
           hormone receptor-associated protein complex 150 kDa
           component) (Trap150)
          Length = 951

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 303 LDISEFLNLNNHGGKARSFFSVRIRSWSWGWG 398
           L   +F+  N  GG+AR  F  R R   WG G
Sbjct: 811 LGTKDFVGPNERGGRARGTFQFRARGRGWGRG 842

>TR150_MOUSE (Q569Z6) Thyroid hormone receptor-associated protein 3 (Thyroid|
           hormone receptor-associated protein complex 150 kDa
           component) (Trap150)
          Length = 951

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 303 LDISEFLNLNNHGGKARSFFSVRIRSWSWGWG 398
           L   +F+  N  GG+AR  F  R R   WG G
Sbjct: 811 LGTKDFVGPNERGGRARGTFQFRARGRGWGRG 842

>VE2_HPV39 (P24830) Regulatory protein E2|
          Length = 370

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 133 SITSRRVKDVLQKN*QSHVKAQQPWEQKTLQPTGDPGRRRPRHCRET 273
           S+ +  +   L     +H  A  P  QKT+ P   P R+RPR C  T
Sbjct: 212 SVPTTELTTELSNTTATHSTATTPCTQKTIPP---PSRKRPRQCAVT 255

>PUR4_HUMAN (O15067) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
            (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
            amidotransferase) (FGARAT) (Formylglycinamide ribotide
            synthetase)
          Length = 1338

 Score = 26.2 bits (56), Expect(2) = 6.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 372  IRSWSWGWGRIPLDKVTT 425
            +R W W W   P D +TT
Sbjct: 1302 VRPWQWAWRPPPFDTLTT 1319



 Score = 20.8 bits (42), Expect(2) = 6.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 202  PWEQKTLQPTGDPG 243
            P EQ  L P G PG
Sbjct: 1266 PTEQYPLNPNGSPG 1279

>IF2_ERWCT (Q6D9A5) Translation initiation factor IF-2|
          Length = 900

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 142 SRRVKDVLQK--N*QSHVKAQQPWEQKTLQPTGDPGRRRPRHCRETFNLPASVVN 300
           +R  K   QK  N QS  KA +  E+      G  G+R+P   +++FN P   VN
Sbjct: 265 TRAAKVTKQKKGNRQSESKADR--EEARAVTRGGKGKRKPSSLQQSFNKPVQAVN 317

>FZY1_CAEEL (Q09373) WD-repeat-containing protein fzy-1 (Fizzy protein 1)|
          Length = 507

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 14/54 (25%)
 Frame = +2

Query: 134 ASHLAESRMFFRK--INNRMLRPNSPGNK-----------KHYSL-LVTPADDG 253
           A+HL  S+++  K  +NN M  PNSP  K           +H S   +T ADDG
Sbjct: 63  ANHLMTSKLYSNKENLNNSMSEPNSPEKKSVEGEALKQMMRHKSTGALTDADDG 116

>RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3|
          Length = 192

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 113 LIKYWDAKMLVVFANGNALFSFTYGKPLYKA 21
           L+K  DAK+  V  NG AL ++  GK   KA
Sbjct: 23  LLKVKDAKVCEVLGNGKALVAYAQGKDANKA 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,157,909
Number of Sequences: 219361
Number of extensions: 976303
Number of successful extensions: 2271
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)