ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart43a07 |
|---|---|
| Clone Library Name | barley_pub |
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 95.5 bits (236), Expect = 6e-20 Identities = 47/47 (100%), Positives = 47/47 (100%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL Sbjct: 368 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 414
>IF414_TOBAC (Q40467) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) Length = 413 Score = 93.2 bits (230), Expect = 3e-19 Identities = 45/47 (95%), Positives = 47/47 (100%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT++DERMLFDIQKFYNVVIEELPANVADLL Sbjct: 367 IGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413
>IF4A_ORYSA (P35683) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 93.2 bits (230), Expect = 3e-19 Identities = 45/47 (95%), Positives = 47/47 (100%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVTR+DERMLFDIQ+FYNVVIEELPANVADLL Sbjct: 368 IGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL 414
>IF4A1_ARATH (P41376) Eukaryotic initiation factor 4A-1 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF-4A-1) Length = 412 Score = 92.8 bits (229), Expect = 4e-19 Identities = 44/47 (93%), Positives = 47/47 (100%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVTR+DERMLFDIQKFYNVV+EELP+NVADLL Sbjct: 366 IGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 412
>IF4A6_TOBAC (Q40469) Eukaryotic initiation factor 4A-6 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-6) (eIF-4A-6) (Fragment) Length = 253 Score = 90.5 bits (223), Expect = 2e-18 Identities = 43/46 (93%), Positives = 46/46 (100%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGRSGRFGRKGV+INFVT++DERMLFDIQKFYNVVIEELPANVADL Sbjct: 208 IGRSGRFGRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANVADL 253
>IF4A8_TOBAC (P41381) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) Length = 413 Score = 90.5 bits (223), Expect = 2e-18 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT +DERMLFDIQKFYNV+IEELP+NVADLL Sbjct: 367 IGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNVIIEELPSNVADLL 413
>IF4A2_NICPL (P41379) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 413 Score = 90.1 bits (222), Expect = 2e-18 Identities = 44/47 (93%), Positives = 46/47 (97%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAIN VT++DERMLFDIQKFYNVVIEELPANVADLL Sbjct: 367 IGRSGRFGRKGVAINSVTKDDERMLFDIQKFYNVVIEELPANVADLL 413
>IF411_TOBAC (Q40465) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) Length = 413 Score = 90.1 bits (222), Expect = 2e-18 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IG SGRFGRKGV+INFVT++DERMLFDIQKFYNVVIEELPANVADLL Sbjct: 367 IGHSGRFGRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413
>IF410_TOBAC (P41382) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) Length = 413 Score = 90.1 bits (222), Expect = 2e-18 Identities = 44/47 (93%), Positives = 46/47 (97%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT++DERML DIQKFYNVVIEELPANVADLL Sbjct: 367 IGRSGRFGRKGVAINFVTKDDERMLSDIQKFYNVVIEELPANVADLL 413
>IF415_TOBAC (Q40468) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) Length = 413 Score = 89.0 bits (219), Expect = 6e-18 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT++DERML DIQ+FYNVVIEELPANVADLL Sbjct: 367 IGRSGRFGRKGVAINFVTKDDERMLSDIQRFYNVVIEELPANVADLL 413
>IF4A2_ARATH (P41377) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 412 Score = 89.0 bits (219), Expect = 6e-18 Identities = 42/47 (89%), Positives = 46/47 (97%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT +D+RMLFDIQKFYNVV+EELP+NVADLL Sbjct: 366 IGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 88.2 bits (217), Expect = 9e-18 Identities = 40/47 (85%), Positives = 46/47 (97%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVTR+DER++FD+Q+FYNV +EELPANVADLL Sbjct: 364 IGRSGRFGRKGVAINFVTRDDERIVFDVQRFYNVTVEELPANVADLL 410
>IF4A9_TOBAC (Q40471) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) Length = 413 Score = 86.7 bits (213), Expect = 3e-17 Identities = 42/47 (89%), Positives = 45/47 (95%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGV+INFVT +DERML DIQ+FYNVVIEELPANVADLL Sbjct: 367 IGRSGRFGRKGVSINFVTSDDERMLSDIQRFYNVVIEELPANVADLL 413
>IF4A7_TOBAC (Q40470) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) Length = 413 Score = 86.7 bits (213), Expect = 3e-17 Identities = 42/47 (89%), Positives = 45/47 (95%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFV ++DERML DIQ+FYNVVIEELPANVADLL Sbjct: 367 IGRSGRFGRKGVAINFVIKDDERMLSDIQRFYNVVIEELPANVADLL 413
>IF4A2_PONPY (Q5R4X1) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 75.1 bits (183), Expect = 8e-14 Identities = 34/47 (72%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT ED+R+L DI+ FYN +EE+P NVADL+ Sbjct: 361 IGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>IF4A2_MOUSE (P10630) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 75.1 bits (183), Expect = 8e-14 Identities = 34/47 (72%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT ED+R+L DI+ FYN +EE+P NVADL+ Sbjct: 361 IGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>IF4A2_HUMAN (Q14240) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 75.1 bits (183), Expect = 8e-14 Identities = 34/47 (72%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT ED+R+L DI+ FYN +EE+P NVADL+ Sbjct: 361 IGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>IF4A2_MACFA (Q4R4Y9) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 408 Score = 75.1 bits (183), Expect = 8e-14 Identities = 34/47 (72%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT ED+R+L DI+ FYN +EE+P NVADL+ Sbjct: 362 IGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 408
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 73.2 bits (178), Expect = 3e-13 Identities = 32/47 (68%), Positives = 41/47 (87%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINF+T +D R+L DI++FY+ IEE+PAN+ADL+ Sbjct: 357 IGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
>IF4A1_RABIT (P29562) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) (Fragment) Length = 398 Score = 71.6 bits (174), Expect = 9e-13 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAIN VT ED+R L DI+ FYN IEE+P NVADL+ Sbjct: 352 IGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 398
>IF4A1_PONPY (Q5R5F5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 71.6 bits (174), Expect = 9e-13 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAIN VT ED+R L DI+ FYN IEE+P NVADL+ Sbjct: 360 IGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>IF4A1_MOUSE (P60843) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 71.6 bits (174), Expect = 9e-13 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAIN VT ED+R L DI+ FYN IEE+P NVADL+ Sbjct: 360 IGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>IF4A1_MACFA (Q4R8K5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 71.6 bits (174), Expect = 9e-13 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAIN VT ED+R L DI+ FYN IEE+P NVADL+ Sbjct: 360 IGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>IF4A1_HUMAN (P60842) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 71.6 bits (174), Expect = 9e-13 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAIN VT ED+R L DI+ FYN IEE+P NVADL+ Sbjct: 360 IGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>IF4A_USTMA (Q4P331) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 411 Score = 71.2 bits (173), Expect = 1e-12 Identities = 33/47 (70%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT +D RML DI++FY+ I+E+P NVADL+ Sbjct: 365 IGRGGRFGRKGVAINFVTSDDVRMLRDIEQFYSTQIDEMPLNVADLI 411
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 70.9 bits (172), Expect = 2e-12 Identities = 31/47 (65%), Positives = 41/47 (87%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT ED R+L DI+++Y+ VI+E+P N+ D++ Sbjct: 348 IGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMPMNIGDMV 394
>IF4A_SCHPO (P47943) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 392 Score = 70.5 bits (171), Expect = 2e-12 Identities = 31/47 (65%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGV+INFVT +D RM+ +I++FYN IEE+P N+ADL+ Sbjct: 346 IGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMPMNIADLI 392
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 70.1 bits (170), Expect = 3e-12 Identities = 33/47 (70%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT ED R+L DI+ +Y+ I+E+P NVADL+ Sbjct: 353 IGRSGRFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLI 399
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 70.1 bits (170), Expect = 3e-12 Identities = 33/47 (70%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT ED R+L DI+ +Y+ I+E+P NVADL+ Sbjct: 354 IGRSGRFGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLI 400
>IF4A_EMENI (Q5B948) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 70.1 bits (170), Expect = 3e-12 Identities = 32/47 (68%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT +D RM+ +I++FY+ IEE+P NVADL+ Sbjct: 375 IGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 421
>IF4A_ASPOR (Q2UPY3) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 70.1 bits (170), Expect = 3e-12 Identities = 32/47 (68%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT +D RM+ +I++FY+ IEE+P NVADL+ Sbjct: 375 IGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 421
>IF4A_NEUCR (Q7RV88) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 425 Score = 70.1 bits (170), Expect = 3e-12 Identities = 32/47 (68%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT +D RM+ +I++FY+ IEE+P NVADL+ Sbjct: 379 IGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 425
>IF4A_CRYNE (Q5KN60) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 401 Score = 69.7 bits (169), Expect = 3e-12 Identities = 31/47 (65%), Positives = 39/47 (82%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFV+ ED+ ML +I+ +YN +EE+P NVADL+ Sbjct: 355 IGRGGRFGRKGVAINFVSNEDKNMLEEIETYYNTQVEEMPLNVADLI 401
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 69.7 bits (169), Expect = 3e-12 Identities = 33/47 (70%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT +D R+L DI+ +Y+ I+E+P NVADLL Sbjct: 351 IGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 397
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 69.7 bits (169), Expect = 3e-12 Identities = 33/47 (70%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT +D R+L DI+ +Y+ I+E+P NVADLL Sbjct: 351 IGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 397
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 69.7 bits (169), Expect = 3e-12 Identities = 33/47 (70%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT +D R+L DI+ +Y+ I+E+P NVADLL Sbjct: 352 IGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 398
>FAL1_CRYNE (Q5KJJ2) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 396 Score = 67.0 bits (162), Expect = 2e-11 Identities = 31/46 (67%), Positives = 40/46 (86%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGRSGRFGRKGVAINFVT +D R+L DI+++Y+ I+E+P NVA+L Sbjct: 350 IGRSGRFGRKGVAINFVTVDDVRILRDIEQYYSTQIDEMPMNVAEL 395
>IF4A_YARLI (Q6CDV4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 395 Score = 67.0 bits (162), Expect = 2e-11 Identities = 30/47 (63%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT ED ML ++++FY+ I E+P N+ADL+ Sbjct: 349 IGRGGRFGRKGVAINFVTSEDHGMLKELERFYSTEIVEMPTNIADLI 395
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 66.6 bits (161), Expect = 3e-11 Identities = 30/47 (63%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGR+GRKGVAINFV +D R+L DI+++Y+ I+E+P NVADL+ Sbjct: 365 IGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 66.6 bits (161), Expect = 3e-11 Identities = 30/47 (63%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGR+GRKGVAINFV +D R+L DI+++Y+ I+E+P NVADL+ Sbjct: 365 IGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 66.6 bits (161), Expect = 3e-11 Identities = 30/47 (63%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGR+GRKGVAINFV +D R+L DI+++Y+ I+E+P NVADL+ Sbjct: 365 IGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>IF4A3_NICPL (P41380) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) Length = 391 Score = 66.2 bits (160), Expect = 4e-11 Identities = 30/47 (63%), Positives = 40/47 (85%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFV +D ++L DI+++Y+ I+E+P NVADL+ Sbjct: 345 IGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 391
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 66.2 bits (160), Expect = 4e-11 Identities = 30/47 (63%), Positives = 37/47 (78%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT D R L +I+ +Y IEE+P ++ADL+ Sbjct: 356 IGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>IF4A_ASPFU (Q4WX43) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 406 Score = 65.5 bits (158), Expect = 7e-11 Identities = 30/44 (68%), Positives = 37/44 (84%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVA 333 IGR GRFGRKGVAINFVT +D RM+ +I++FY+ IEE+P NVA Sbjct: 352 IGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVA 395
>FAL1_DEBHA (Q6BT27) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 65.1 bits (157), Expect = 9e-11 Identities = 30/47 (63%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAIN VT+ED L DI++FY + I+E+P NV D++ Sbjct: 353 IGRSGRFGRKGVAINLVTKEDVDELRDIERFYRIRIKEMPVNVNDIM 399
>IF4A_YEAST (P10081) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1/2) (Stimulator factor I 37 kDa component) (p37) Length = 394 Score = 64.7 bits (156), Expect = 1e-10 Identities = 30/47 (63%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GRFGRKGVAINFVT ED + +++KFY+ IEELP+++A LL Sbjct: 347 IGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 393
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 64.7 bits (156), Expect = 1e-10 Identities = 30/47 (63%), Positives = 38/47 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINFVT +D R L DI++FY+ I+E+P + D+L Sbjct: 351 IGRSGRFGRKGVAINFVTVDDVRTLRDIEQFYSTQIDEMPVKLEDML 397
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 63.5 bits (153), Expect = 3e-10 Identities = 28/47 (59%), Positives = 37/47 (78%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKGVAINF T +D L DI+++Y+ I+E+P NV D++ Sbjct: 351 IGRSGRFGRKGVAINFATNDDITTLRDIEQYYSTQIDEMPVNVTDMM 397
>FAL1_YEAST (Q12099) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-) (Translation| initiation factor four A-like protein 1) Length = 399 Score = 63.2 bits (152), Expect = 3e-10 Identities = 29/46 (63%), Positives = 37/46 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGRSGRFGRKGVAINF+T+ D L +I+KFY++ I +PAN A+L Sbjct: 353 IGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPANFAEL 398
>IF4A_DEBHA (Q6BRN4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 62.8 bits (151), Expect = 4e-10 Identities = 29/46 (63%), Positives = 37/46 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGR GRFGRKGVAINFVT +D M+ +I+KFY+ IEE+PA++ L Sbjct: 350 IGRGGRFGRKGVAINFVTDQDVGMMREIEKFYSTQIEEMPADIGAL 395
>IF4A_ASHGO (Q75BL8) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1) Length = 396 Score = 62.0 bits (149), Expect = 7e-10 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGR GRFGRKGVAIN VT D + ++++FY+ IEELPAN+ADL Sbjct: 349 IGRGGRFGRKGVAINLVTDRDVGDMRELERFYSTQIEELPANIADL 394
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 62.0 bits (149), Expect = 7e-10 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGR GRFGRKGVAINFVT D M+ +I+KFY+ IEE+PA++ L Sbjct: 350 IGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMPADIGAL 395
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 60.8 bits (146), Expect = 2e-09 Identities = 28/47 (59%), Positives = 36/47 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFG+KGV+INFVT +D L DI++ YN IEE+P + D+L Sbjct: 358 IGRSGRFGKKGVSINFVTDDDIVCLRDIERHYNTQIEEMPMGITDIL 404
>IF4A_KLULA (Q6CXT4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 59.7 bits (143), Expect = 4e-09 Identities = 25/46 (54%), Positives = 38/46 (82%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGR GRFGRKG+AINFVT +D + ++++FY+ IEELP+++++L Sbjct: 349 IGRGGRFGRKGIAINFVTNKDIGAMRELERFYSTQIEELPSSISEL 394
>IF4A_CANGA (Q6FQQ6) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 59.7 bits (143), Expect = 4e-09 Identities = 26/46 (56%), Positives = 36/46 (78%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGR GRFGRKGVAINF+ ED + L ++++FY+ IEELP+++ L Sbjct: 349 IGRGGRFGRKGVAINFIVNEDVQALRELEQFYSTQIEELPSDIGTL 394
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 58.9 bits (141), Expect = 6e-09 Identities = 27/46 (58%), Positives = 36/46 (78%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGRSGRFGRKGVAINF+TRE+ L I+K Y++ I+ +PA++ L Sbjct: 352 IGRSGRFGRKGVAINFITREEVTKLKSIEKHYSIKIKPMPADIDSL 397
>FAL1_KLULA (Q6CX73) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 57.8 bits (138), Expect = 1e-08 Identities = 26/46 (56%), Positives = 35/46 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGRSGRFGRKGVAINF+T+E+ L +I+ Y + I+ PAN+ +L Sbjct: 352 IGRSGRFGRKGVAINFITKEERPKLKEIESHYRIKIKPTPANLEEL 397
>FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 57.8 bits (138), Expect = 1e-08 Identities = 24/46 (52%), Positives = 38/46 (82%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGRSGRFGRKGVAINF+T+ D + +I+K+Y + ++ +PA++++L Sbjct: 353 IGRSGRFGRKGVAINFLTKIDASRMKEIEKYYKIKVKPMPADLSEL 398
>FAL1_CANAL (Q5A9Z6) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 57.8 bits (138), Expect = 1e-08 Identities = 24/47 (51%), Positives = 36/47 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFGRKG AIN +T++D L + +K+Y+ I+E+P N+ D++ Sbjct: 353 IGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEMPMNINDIM 399
>IF4A_LEIBR (Q25225) Probable eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 52.4 bits (124), Expect = 6e-07 Identities = 25/47 (53%), Positives = 33/47 (70%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR GR+G KGVAINFVT +D +L +I+ Y+ I+ELP + A L Sbjct: 355 IGRGGRYGVKGVAINFVTEKDVELLHEIEGHYHTQIDELPVDFAAYL 401
>SUB2_EMENI (Q5ASK8) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 451 Score = 47.0 bits (110), Expect = 2e-05 Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG++I+FV T EDE++L DI+K + V + E P D Sbjct: 400 VGRAGRFGTKGLSISFVSTPEDEQVLKDIEKRFEVALPEYPEEGVD 445
>SUB2_ASPOR (Q2U6P7) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 441 Score = 46.6 bits (109), Expect = 3e-05 Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVT-REDERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG++I+FV+ EDE++L DI+K + V + E P D Sbjct: 390 VGRAGRFGTKGLSISFVSNEEDEKVLKDIEKRFEVALPEYPEGGVD 435
>SUB2_CANGA (Q6FL17) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 439 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVT-REDERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG+AI+FV+ +EDE +L IQ+ ++V I E P D Sbjct: 387 VGRAGRFGTKGLAISFVSNKEDEEVLSKIQERFDVKIAEFPEEGID 432
>SUB2_YEAST (Q07478) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-) (Suppressor| of BRR1 protein 2) Length = 446 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG+AI+FV ++EDE +L IQ+ ++V I E P D Sbjct: 394 VGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFPEEGID 439
>SUB2_ASPFU (Q4WCW2) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 448 Score = 45.1 bits (105), Expect = 9e-05 Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG++I+FV + EDE++L +I+K + V + E P D Sbjct: 397 VGRAGRFGTKGLSISFVSSEEDEKVLKEIEKRFEVALPEYPEGGVD 442
>DBP5_EMENI (Q5AVM1) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 477 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 1/40 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVT-REDERMLFDIQKFYNVVIEEL 348 IGR+GRFGR GV+I+FV+ RE+ ML IQK++N I+ + Sbjct: 412 IGRTGRFGRVGVSISFVSNREEWEMLNQIQKYFNTDIQRI 451
>DBP5_ASPOR (Q2U8K6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 487 Score = 43.1 bits (100), Expect = 3e-04 Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 1/40 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVT-REDERMLFDIQKFYNVVIEEL 348 IGR+GRFGR GV+I+FV+ RE+ ML IQ+++N I+ + Sbjct: 421 IGRTGRFGRVGVSISFVSNREEWNMLNQIQQYFNCTIQRV 460
>DBP80_DROME (O61305) DEAD-box helicase Dbp80 (EC 3.6.1.-)| Length = 460 Score = 43.1 bits (100), Expect = 3e-04 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDE-RMLFDIQKFYNVVIEELPANVAD 330 IGR+GRFG+ G+AIN +T E ++ DI+K +N IE L + AD Sbjct: 408 IGRTGRFGKSGIAINLITDEKTMKVCSDIEKHFNKKIEVLNTDSAD 453
>SUB2_DEBHA (Q6BME5) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 435 Score = 42.7 bits (99), Expect = 5e-04 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG+A++ V T++DE +L IQ ++V I E P D Sbjct: 383 VGRAGRFGTKGLAVSLVSTKDDEEVLEKIQSRFDVKITEFPEEGVD 428
>SUB2_YARLI (Q6CH89) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 441 Score = 42.7 bits (99), Expect = 5e-04 Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG+AI+FV T ED+ +L IQ+ + V I PA D Sbjct: 389 VGRAGRFGTKGLAISFVSTPEDKEVLAKIQERFEVNIAPYPAEGVD 434
>SUB2_ASHGO (Q759L6) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 438 Score = 42.4 bits (98), Expect = 6e-04 Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG+AI+ V +++DE +L IQ+ ++V I E P D Sbjct: 386 VGRAGRFGTKGLAISLVSSKDDEEVLAKIQERFDVKITEFPEEGVD 431
>SUB2_KLULA (Q6CM95) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 437 Score = 42.4 bits (98), Expect = 6e-04 Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANVAD 330 +GR+GRFG KG+AI+ ++ E DE++L IQ+ ++V I E P D Sbjct: 385 VGRAGRFGTKGLAISMISSEDDEQVLAKIQERFDVKITEFPEEGVD 430
>UAP56_RAT (Q63413) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UAP56_PONPY (Q5RE47) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UAP56_PIG (Q29024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UAP56_PANTR (P60024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UAP56_MOUSE (Q9Z1N5) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (HLA-B-associated transcript 1) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UAP56_MACMU (Q5TM17) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UAP56_HUMAN (Q13838) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (HLA-B-associated transcript-1) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UAP56_CHICK (Q5ZHZ0) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UAP56_CANFA (Q5WR10) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V I ELP + Sbjct: 375 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>SUB2_CRYNE (Q5KNA3) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 442 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 +GR+GRFG KG+AI+FV+ + D+ +L IQ+ + V I LP V Sbjct: 391 VGRAGRFGTKGLAISFVSSDADQEVLQRIQERFTVAIPTLPETV 434
>SUB2_SCHPO (O13792) ATP-dependent RNA helicase uap56 (EC 3.6.1.-)| Length = 434 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFD-IQKFYNVVIEELPANV 336 +GR+GRFG KG+AI F + E++ + D IQ+ + V I ELP + Sbjct: 383 VGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVNITELPDEI 426
>DDX6_MOUSE (P54823) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) Length = 483 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGRSGRFG G+AIN +T +D L I++ I+ +P+N+ Sbjct: 422 IGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI----------------- 464 Query: 284 GGPDRALFLLKYH 246 D++L++ +YH Sbjct: 465 ---DKSLYVAEYH 474
>DDX6_HUMAN (P26196) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK) Length = 483 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGRSGRFG G+AIN +T +D L I++ I+ +P+N+ Sbjct: 422 IGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI----------------- 464 Query: 284 GGPDRALFLLKYH 246 D++L++ +YH Sbjct: 465 ---DKSLYVAEYH 474
>DBP5_ASPFU (Q4WIN6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 511 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/40 (52%), Positives = 30/40 (75%), Gaps = 1/40 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVT-REDERMLFDIQKFYNVVIEEL 348 IGR+GRFGR GV+I+FV+ RE+ ML IQ ++N I+ + Sbjct: 442 IGRTGRFGRVGVSISFVSNREEWEMLNQIQTYFNCEIQRV 481
>DDX39_HUMAN (O00148) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase URH49) Length = 427 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L D+Q + V + ELP + Sbjct: 374 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEI 417
>DDX39_RAT (Q5U216) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase, DECD variant of DEAD box family) Length = 427 Score = 41.2 bits (95), Expect = 0.001 Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+A+ FV+ E D ++L D+Q + V + ELP + Sbjct: 374 VARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEI 417
>DDX39_MOUSE (Q8VDW0) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) Length = 427 Score = 41.2 bits (95), Expect = 0.001 Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+A+ FV+ E D ++L D+Q + V + ELP + Sbjct: 374 VARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEI 417
>UAP56_DROME (Q27268) ATP-dependent RNA helicase WM6 (EC 3.6.1.-) (DEAD box| protein UAP56) (HEL/UAP56) Length = 424 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D ++L ++Q ++V I ELP + Sbjct: 372 VARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEI 415
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/47 (42%), Positives = 30/47 (63%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR GRKG A+ FV + R+L +I++ N+ I E+ +D L Sbjct: 332 IGRTGRAGRKGKALLFVENRERRLLRNIERAMNISISEVNLPKSDFL 378
>DHH1_ASPOR (Q2U5A2) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 511 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN + +D L+ I++ I+ +P N+ Sbjct: 372 IGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNI 414
>DHH1_GIBZE (Q4HW67) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 486 Score = 40.4 bits (93), Expect = 0.002 Identities = 17/43 (39%), Positives = 29/43 (67%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGR+G G+AIN + +D L++I++ I+ +PA++ Sbjct: 367 IGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPASI 409
>DHH1_ASPFU (Q4WWD3) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 507 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN + +D L+ I++ I+ +P N+ Sbjct: 372 IGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNI 414
>ME31_DROME (P23128) Putative ATP-dependent RNA helicase me31b (EC 3.6.1.-)| (Maternal expression at 31B) Length = 459 Score = 40.4 bits (93), Expect = 0.002 Identities = 20/40 (50%), Positives = 25/40 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELP 345 IGRSGRFG G+AIN +T ED L I+K I+ +P Sbjct: 383 IGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKPIP 422
>DHH1_YARLI (Q6C0X2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 522 Score = 40.0 bits (92), Expect = 0.003 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN + D L+ I++ I+ +PA + Sbjct: 353 IGRSGRFGHLGIAINLINWNDRYNLYKIEQELGTEIKPIPAQI 395
>DHH1_CRYNV (Q58Z64) ATP-dependent RNA helicase VAD1 (EC 3.6.1.-) (Virulence| associated DEAD box protein 1) Length = 616 Score = 39.7 bits (91), Expect = 0.004 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFG G+AI+ +T ED L+ I+ I +PA + +L Sbjct: 362 IGRSGRFGHLGLAISLLTLEDRHNLYRIESELGTEIAPIPAVIDPVL 408
>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 625 Score = 39.7 bits (91), Expect = 0.004 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGRSGRFG G+AI+ +T ED L+ I+ I +PA + +L Sbjct: 362 IGRSGRFGHLGLAISLLTLEDRHNLYRIESELGTEIAPIPAVIDPVL 408
>DHH1_KLULA (Q6CSZ7) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 514 Score = 39.3 bits (90), Expect = 0.005 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN + D L+ I++ N I +P+ + Sbjct: 361 IGRSGRFGHLGLAINLINWNDRFNLYKIEQELNTEIAPIPSQI 403
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 39.3 bits (90), Expect = 0.005 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN ++ D L+ I++ I+ +PA + Sbjct: 355 IGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGTEIKPIPATI 397
>UAP56_CAEEL (Q18212) Spliceosome RNA helicase BAT1 homolog (EC 3.6.1.-) (DEAD| box protein UAP56) Length = 425 Score = 39.3 bits (90), Expect = 0.005 Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANV 336 + R+GRFG KG+AI FV+ E D + L +Q +++ I ELP + Sbjct: 371 VARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKI 414
>DDX6_XENLA (P54824) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Xp54) Length = 481 Score = 39.3 bits (90), Expect = 0.005 Identities = 18/43 (41%), Positives = 28/43 (65%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN +T +D L I++ I+ +P+++ Sbjct: 421 IGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSI 463
>DDX25_HUMAN (Q9UHL0) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 39.3 bits (90), Expect = 0.005 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVAD 330 IGR+GRFG+KG+A N + ++ L IQ +N I++L A D Sbjct: 432 IGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAEDMD 476
>DHH1_SCHPO (Q09181) Putative ATP-dependent RNA helicase ste13 (EC 3.6.1.-)| Length = 485 Score = 38.9 bits (89), Expect = 0.007 Identities = 17/43 (39%), Positives = 28/43 (65%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG +G+AI+F++ D L+ I+ I+ +P ++ Sbjct: 369 IGRSGRFGHRGLAISFISWADRFNLYRIENELGTEIQPIPPSI 411
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 38.1 bits (87), Expect = 0.011 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN + D L+ I++ I +PA + Sbjct: 371 IGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATI 413
>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 484 Score = 38.1 bits (87), Expect = 0.011 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN + D L+ I++ I +PA + Sbjct: 354 IGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPAQI 396
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 38.1 bits (87), Expect = 0.011 Identities = 14/29 (48%), Positives = 24/29 (82%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQ 378 IGR+GR G+ GVAI F+T +D+ +++D++ Sbjct: 672 IGRTGRAGKTGVAITFLTNDDDEVMYDLR 700
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 38.1 bits (87), Expect = 0.011 Identities = 18/40 (45%), Positives = 27/40 (67%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPA 342 GR+GR G KG AI+FVT ++R L DI+++ I ++ A Sbjct: 329 GRTGRAGNKGKAISFVTAFEKRFLADIEEYIGFEIPKIEA 368
>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 507 Score = 38.1 bits (87), Expect = 0.011 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGRFG G+AIN + D L+ I++ I +PA + Sbjct: 356 IGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATI 398
>DHH1_NEUCR (Q7S5D9) ATP-dependent RNA helicase dhh-1 (EC 3.6.1.-)| Length = 569 Score = 38.1 bits (87), Expect = 0.011 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 IGRSGR+G G+AIN + +D L++I++ I+ +P + Sbjct: 370 IGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPQTI 412
>DDX25_RAT (Q9QY16) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 37.7 bits (86), Expect = 0.015 Identities = 17/39 (43%), Positives = 26/39 (66%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEEL 348 IGR+GRFG+KG+A N + + +L IQ +N I++L Sbjct: 432 IGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 37.4 bits (85), Expect = 0.019 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 +GR+GR G GVA+ F+T E E+ DI K + + +P + L Sbjct: 756 VGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTL 801
>DDX25_MOUSE (Q9QY15) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 484 Score = 37.4 bits (85), Expect = 0.019 Identities = 17/39 (43%), Positives = 26/39 (66%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEEL 348 IGR+GRFG+KG+A N + + +L IQ +N I++L Sbjct: 433 IGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 471
>DD19B_HUMAN (Q9UMR2) ATP-dependent RNA helicase DDX19B (EC 3.6.1.-) (DEAD box| protein 19B) (DEAD box RNA helicase DEAD5) Length = 479 Score = 37.4 bits (85), Expect = 0.019 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 IGR+GRFG++G+A+N V ++ +L IQ+ +N IE L + D Sbjct: 427 IGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 472
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 37.4 bits (85), Expect = 0.019 Identities = 14/30 (46%), Positives = 24/30 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 IGR+GR G+ GVAI F+T+ED + +++++ Sbjct: 752 IGRTGRAGKSGVAITFLTKEDSAVFYELKQ 781
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 37.4 bits (85), Expect = 0.019 Identities = 14/30 (46%), Positives = 24/30 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 IGR+GR G+ GVAI F+T+ED + +++++ Sbjct: 752 IGRTGRAGKSGVAITFLTKEDSAVFYELKQ 781
>DBP5_YEAST (P20449) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-) (DEAD box| protein 5) (Helicase CA5/6) (Ribonucleic acid trafficking protein 8) Length = 482 Score = 37.4 bits (85), Expect = 0.019 Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFY 369 IGR+GRFGRKGVAI+FV + +L IQK++ Sbjct: 424 IGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF 456
>DBP5_NEUCR (Q8X0X2) ATP-dependent RNA helicase dbp-5 (EC 3.6.1.-)| Length = 483 Score = 37.4 bits (85), Expect = 0.019 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 IGR+GRFGR GV+I+FV R L I +FY + + +L N D Sbjct: 410 IGRTGRFGRVGVSISFVHDRRSFEALSQIAQFYGIDLIQLNPNDLD 455
>DD19A_MOUSE (Q61655) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DEAD box RNA helicase DEAD5) (mDEAD5) (Eukaryotic translation initiation factor 4A-related sequence 1) Length = 478 Score = 37.4 bits (85), Expect = 0.019 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 IGR+GRFG++G+A+N V ++ +L IQ+ +N IE L + D Sbjct: 426 IGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
>DD19A_HUMAN (Q9NUU7) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DDX19-like protein) Length = 478 Score = 37.4 bits (85), Expect = 0.019 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPANVAD 330 IGR+GRFG++G+A+N V ++ +L IQ+ +N IE L + D Sbjct: 426 IGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
>DBP5_KLULA (Q6CJU1) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 469 Score = 37.0 bits (84), Expect = 0.025 Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 2/47 (4%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFY-NVVIEELPANVAD 330 IGR+GRFGR GVAI+F+ ++ +L IQK++ ++ I ++P + D Sbjct: 411 IGRTGRFGRTGVAISFIHDKKSFEVLSAIQKYFGDIEITKVPTDDLD 457
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 37.0 bits (84), Expect = 0.025 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G KG AI F T ++ + D+ +++ +A+++ R G GG Sbjct: 465 IGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQIDPRLAEMV------RYSGGGG 518 Query: 284 GG 279 GG Sbjct: 519 GG 520
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 36.6 bits (83), Expect = 0.033 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR GR G A+ FV + R+L +I++ + I E+ A+LL Sbjct: 332 IGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELL 378
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 36.6 bits (83), Expect = 0.033 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G KG AI F T E+ + D+ +++ +A++ Y GG Sbjct: 456 IGRTGRAGAKGTAITFFTTENSKQARDLVTILTEAKQQIDPRLAEM-------ARYSGGG 508 Query: 284 GG 279 GG Sbjct: 509 GG 510
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 36.6 bits (83), Expect = 0.033 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR GR G A+ FV + R+L +I++ + I E+ A+LL Sbjct: 332 IGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELL 378
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 36.6 bits (83), Expect = 0.033 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR GR G A+ FV + R+L +I++ + I E+ A+LL Sbjct: 332 IGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELL 378
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 36.6 bits (83), Expect = 0.033 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR GR G A+ FV + R+L +I++ + I E+ A+LL Sbjct: 332 IGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELL 378
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 36.6 bits (83), Expect = 0.033 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR GR G A+ FV + R+L +I++ + I E+ A+LL Sbjct: 332 IGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELL 378
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 36.2 bits (82), Expect = 0.043 Identities = 13/30 (43%), Positives = 25/30 (83%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 IGR+GR G++G A+ F+ +ED+ +LF++++ Sbjct: 519 IGRTGRAGKRGTAVTFLGQEDDDVLFELKQ 548
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 35.8 bits (81), Expect = 0.056 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 GR+GR G G A+ F+T + ER DI K +E+P V L+ Sbjct: 882 GRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQEVPEAVQKLV 927
>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 35.8 bits (81), Expect = 0.056 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDE-RMLFDIQKFYNVVIEELPANVAD 330 IGR+GRFGR GV+I+FV E +L IQ+ + + ++P + D Sbjct: 430 IGRTGRFGRSGVSISFVHDEASFEVLDSIQQSLGMTLTQVPTDDID 475
>TOCC_MAIZE (Q94FY8) Probable tocopherol cyclase, chloroplast precursor| (Sucrose export defective 1) Length = 474 Score = 35.8 bits (81), Expect = 0.056 Identities = 21/65 (32%), Positives = 26/65 (40%) Frame = +2 Query: 191 PQQTIYPLNPPSPTDKKLGDISTKTKPCQDPHPPYHMFSTARTITEGQQRWLGALQSPRC 370 P P+ P+P D+ L + PH YH TAR EG W + P C Sbjct: 47 PSAAAAPIYTPTPQDRSL----------RTPHSGYHFDGTARPFFEG---WYFKVSIPEC 93 Query: 371 RTSGC 385 R S C Sbjct: 94 RQSFC 98
>PRP28_NEUCR (Q7SEL0) Pre-mRNA splicing ATP-dependent RNA helicase prp-28 (EC| 3.6.1.-) Length = 728 Score = 35.8 bits (81), Expect = 0.056 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 IGR+GR G+ GVAI F+ ED +L+D+++ Sbjct: 654 IGRTGRAGKSGVAITFLGPEDNDVLYDLRQ 683
>DBP5_USTMA (Q4P7Z8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 456 Score = 35.8 bits (81), Expect = 0.056 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFD-IQKFYNVVIEELPAN 339 IGR+GRFGRKGV+INFV + D I+K I + N Sbjct: 396 IGRTGRFGRKGVSINFVHDQQSWSYMDQIEKALKCQITRVATN 438
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 35.4 bits (80), Expect = 0.073 Identities = 14/30 (46%), Positives = 23/30 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 IGR+GR G+ GVAI F+ ED +++D+++ Sbjct: 730 IGRTGRAGKSGVAITFLGNEDTDVMYDLKQ 759
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 35.4 bits (80), Expect = 0.073 Identities = 14/30 (46%), Positives = 23/30 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 IGR+GR G+ GVAI F+ ED +++D+++ Sbjct: 722 IGRTGRAGKSGVAITFLGNEDADVMYDLKQ 751
>UNG_CLOPE (Q8XNR7) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 225 Score = 35.0 bits (79), Expect = 0.095 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = +3 Query: 261 KQSPVRTPTPLTICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIFT---RNKVDGH 431 KQ + T LT+ Q A S K GWE+F V+ELL+ ++ P++F RN + Sbjct: 116 KQGILLLNTVLTVREGQ-ANSHK--GKGWEIFTDRVIELLNKREEPIVFILWGRNAISKE 172 Query: 432 TLPSKP 449 L + P Sbjct: 173 ALITNP 178
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 35.0 bits (79), Expect = 0.095 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 IGR+GR G+ GVAI F+ ED ++D+++ Sbjct: 649 IGRTGRAGKSGVAITFLGPEDHETMYDLKQ 678
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 35.0 bits (79), Expect = 0.095 Identities = 17/39 (43%), Positives = 25/39 (64%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEEL 348 IGR+GR GR G A+ FV + R+L +I++ N I E+ Sbjct: 332 IGRTGRAGRAGRALLFVENRERRLLRNIERTINQTIPEV 370
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 34.7 bits (78), Expect = 0.12 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 GR+GR G G A+ F+T E ER DI K +++P V ++ Sbjct: 916 GRTGRAGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMV 961
>DBP5_SCHPO (Q09747) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 503 Score = 34.7 bits (78), Expect = 0.12 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEELPAN 339 IGR+GRFGR GV+INFV ++ + IQ+++ I +P + Sbjct: 446 IGRTGRFGRVGVSINFVHDKKSWEEMNAIQEYFQRPITRVPTD 488
>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 913 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 +GR+GR GRKG AI FV+ + R + D+ K Sbjct: 664 VGRTGRAGRKGTAITFVSSKQGRAITDLVK 693
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 34.7 bits (78), Expect = 0.12 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYN 366 IGR+GR G KG + F+ D + D++KF N Sbjct: 525 IGRTGRAGNKGTSCTFIDDGDSEVFLDLKKFLN 557
>DBP8_CRYNE (Q5KPU1) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 619 Score = 34.7 bits (78), Expect = 0.12 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEEL 348 +GR+ R GR GVA+ +T D ++ I+ NV +EEL Sbjct: 526 VGRTARAGRGGVAVTIITERDTELVKIIEDEVNVRLEEL 564
>DBP5_ASHGO (Q75C39) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 467 Score = 34.7 bits (78), Expect = 0.12 Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFY-NVVIEELPANVAD 330 IGR+GRFGR GVAI+F+ ++ L IQ ++ ++ I ++P + D Sbjct: 410 IGRTGRFGRTGVAISFIHDKKSYETLAAIQSYFGDIQITKVPTDDMD 456
>DBP5_CANGA (Q6FKN8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 504 Score = 33.9 bits (76), Expect = 0.21 Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 1/33 (3%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFY 369 IGR+GRFGR GVAI+FV ++ ++L IQ ++ Sbjct: 446 IGRTGRFGRTGVAISFVHDKKSFKILSAIQDYF 478
>DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 33.9 bits (76), Expect = 0.21 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR GR G A + T E+ + ++ +E+P + ++ +G GG Sbjct: 464 IGRTGRAGRTGTAYTYFTPENSKSARELIGILREAKQEIPREIEEM-------GRFGGGG 516 Query: 284 GG 279 GG Sbjct: 517 GG 518
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 33.9 bits (76), Expect = 0.21 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G KG AI F T ++ + D+ + +++ +A+++ Y GG Sbjct: 475 IGRTGRAGAKGTAITFFTTDNAKQARDLVTILSEAKQQIDPRLAEMV-------RYSGGG 527 Query: 284 G 282 G Sbjct: 528 G 528
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 33.9 bits (76), Expect = 0.21 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDI 381 GR+GR G KG I F+T E ER DI Sbjct: 745 GRTGRAGNKGTCITFITPEQERFSVDI 771
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 33.9 bits (76), Expect = 0.21 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGR+GR G GVA +F ++ ++ + + N +E+P ++DL Sbjct: 499 IGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLSDL 544
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 33.5 bits (75), Expect = 0.28 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR GR G A+ FV + R+L +I++ I E+ +LL Sbjct: 332 IGRTGRAGRAGRALLFVENRERRLLRNIERTMKQSIPEVQLPKVELL 378
>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 536 Score = 33.5 bits (75), Expect = 0.28 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL-L*SCGLWRTYGKG 288 IGR+GR G G A++F T + ++ D+ K + +P + S G YG+G Sbjct: 440 IGRTGRAGSTGTAVSFFTDNNSKLGGDLCKIMREANQTIPPELMRFDRRSFGSHIRYGRG 499 Query: 287 GG 282 GG Sbjct: 500 GG 501
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 33.1 bits (74), Expect = 0.36 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G KG AI F T ++ + ++ +++ +A++ Y GG Sbjct: 469 IGRTGRAGAKGTAITFFTTDNSKQARELVGVLQEAKQQIDPRLAEM-------ARYSGGG 521 Query: 284 GG 279 GG Sbjct: 522 GG 523
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 33.1 bits (74), Expect = 0.36 Identities = 13/37 (35%), Positives = 25/37 (67%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIE 354 IGR+ R G+KG A++FV D ++L I+++ +++ Sbjct: 336 IGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILK 372
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 33.1 bits (74), Expect = 0.36 Identities = 17/62 (27%), Positives = 31/62 (50%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G GVA F R ++ + ++ + +E+P+ + ++ R +GG Sbjct: 504 IGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREASSGRGGARGG 563 Query: 284 GG 279 G Sbjct: 564 RG 565
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 33.1 bits (74), Expect = 0.36 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 GR+GR G G A+ F+T + ER DI K + +P V ++ Sbjct: 895 GRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQSVPEPVQKMV 940
>UNG_SHEON (Q8EB78) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 218 Score = 33.1 bits (74), Expect = 0.36 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 T+ + + ++ +N GWE+F ++LL+ ++ P+IF Sbjct: 120 TVLTVEQGQAHSHANAGWEIFTTEALKLLNAQERPIIF 157
>DDX20_HUMAN (Q9UHI6) Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.-)| (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3) Length = 824 Score = 32.7 bits (73), Expect = 0.47 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTR-EDERMLFDIQKFYNVVIEELPANV-ADLL*SCGLW 306 IGR+GRFG G+ + + R E+E M+ I + N+ + LP + + L+ C W Sbjct: 397 IGRAGRFGTLGLTVTYCCRGEEENMMMRIAQKCNINLLPLPDPIPSGLMEECVDW 451
>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 569 Score = 32.7 bits (73), Expect = 0.47 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRED 402 IGR+GR GRKG A+ F T++D Sbjct: 462 IGRTGRGGRKGTAVTFFTKQD 482
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 32.7 bits (73), Expect = 0.47 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL-*SCGLWRTYGKG 288 IGR+GR G G+A F + +D + D+ K + +P + D+ G+ R Sbjct: 477 IGRTGRAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMASRGGGMGRARNHW 536 Query: 287 GGGP 276 G GP Sbjct: 537 GSGP 540
>UNG2_LISMO (Q8Y7P6) Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG 2)| Length = 224 Score = 32.7 bits (73), Expect = 0.47 Identities = 9/38 (23%), Positives = 24/38 (63%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 T+ + + ++ GWE+ +H++E+++ K+ P++F Sbjct: 123 TVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVF 160
>DBP5_CANAL (Q5AJD0) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 540 Score = 32.7 bits (73), Expect = 0.47 Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 2/44 (4%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFY-NVVIEELPAN 339 IGR+GRFGR GV+I+F+ R +L I+ ++ NV + +P + Sbjct: 482 IGRTGRFGRVGVSISFIHDRRSYDILMAIKAYFGNVEMTRVPTD 525
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/39 (38%), Positives = 26/39 (66%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEEL 348 IGR+GR G+KG AI+ + R + + L I++ + I++L Sbjct: 326 IGRTGRAGKKGKAISIINRREYKKLRYIERAMKLKIKKL 364
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 32.3 bits (72), Expect = 0.62 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 +GR+GR G+KG A+ F+ + ER+ +I + Sbjct: 752 VGRTGRAGQKGTALTFLLSDQERLAAEISR 781
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 32.3 bits (72), Expect = 0.62 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDI 381 GR+GR G+KG I F+T E +R DI Sbjct: 816 GRTGRAGQKGTCITFITPEQDRYARDI 842
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 32.3 bits (72), Expect = 0.62 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 +GR+ R GR+G AI VT+ D +L I++ + EL A++L Sbjct: 336 VGRTARAGRQGQAITLVTQYDIHLLHAIEEQIKQQLAELVVEEAEVL 382
>DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 802 Score = 32.3 bits (72), Expect = 0.62 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 +GR+ R GRKG A + + +ED L D+ F PA+V Sbjct: 393 VGRTARAGRKGTAYSLIVKEDFPYLCDLHTFLGTERMGEPADV 435
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 32.3 bits (72), Expect = 0.62 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G G+A F R ++ ++ ++ ++EE V L +YG GG Sbjct: 490 IGRTGRAGNTGLATAFFNRGNKNVVKELVD----ILEEANQEVPSFLSQIAKEMSYGGGG 545 Query: 284 GGPDR 270 G R Sbjct: 546 GKSSR 550
>DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 618 Score = 32.3 bits (72), Expect = 0.62 Identities = 21/68 (30%), Positives = 34/68 (50%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G G+A F R ++ ++ ++ +++E +V L S +YG G Sbjct: 506 IGRTGRAGNTGIATAFFNRGNKGIVRELID----ILKEAHQDVPQFLESTAREASYGGRG 561 Query: 284 GGPDRALF 261 GG R F Sbjct: 562 GGRGRGGF 569
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 32.3 bits (72), Expect = 0.62 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 +GR+ R GR+G AI VT+ D ++ I++ +EE A++L Sbjct: 336 VGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVL 382
>DDX20_MOUSE (Q9JJY4) Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.-)| (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3) (Regulator of steroidogenic factor 1) (ROSF-1) Length = 825 Score = 32.3 bits (72), Expect = 0.62 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTR-EDERMLFDIQKFYNVVIEELP 345 IGR+GRFG G+ + + R E+E M+ I + N+ + LP Sbjct: 398 IGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNINLLPLP 438
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 IGR+GR GR GV+I +TR D R+ ++ + +P + + Sbjct: 575 IGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSM 620
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 32.0 bits (71), Expect = 0.81 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G G + F R + + D+ + +E+P + ++ R+YG GG Sbjct: 510 IGRTGRAGNVGTSTAFFNRGNTNIGKDLIELLKEANQEVPQWLVEI----SSERSYGGGG 565 Query: 284 GG 279 GG Sbjct: 566 GG 567
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 32.0 bits (71), Expect = 0.81 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 GR+GR G KG A F+T R DI K + +PA + L Sbjct: 676 GRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAELEQL 720
>AME1_YEAST (P38313) Central kinetochore subunit AME1 (Associated with| microtubules and essential protein 1) Length = 324 Score = 32.0 bits (71), Expect = 0.81 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Frame = +3 Query: 249 IFQQKQSPVRTPTPLTICSPQPARSQK----VSNVGWELFNHHVVELLDVKQHPLIFTRN 416 +++++ SP+++P + SP+ A S + +NV + + H + LD + +P+I + N Sbjct: 35 VYREENSPIQSPVQPILSSPKLANSFEFPITTNNVNAQDRHEHGYQPLDAEDYPMIDSEN 94 Query: 417 K 419 K Sbjct: 95 K 95
>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 546 Score = 32.0 bits (71), Expect = 0.81 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVV 360 IGR+GRFGRKG ++ F D R D+++ N + Sbjct: 484 IGRTGRFGRKGCSVIFT--HDYRSKSDVERIMNTL 516
>DBP5_DEBHA (Q6BRE4) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 493 Score = 32.0 bits (71), Expect = 0.81 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 4/46 (8%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK----FYNVVIEELPAN 339 IGR+GRFGR GV+I+FV D++ D+ F N+ + +P + Sbjct: 435 IGRTGRFGRVGVSISFV--HDQKSYQDLMAIRSYFGNIEMTRVPTD 478
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 32.0 bits (71), Expect = 0.81 Identities = 18/62 (29%), Positives = 34/62 (54%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR GRKG + + T ++ + ++ + ++ E A++ L ++ G+GG Sbjct: 444 IGRTGRAGRKGTSYTYFTMDNSKAARELVQ----ILRESKADIPPELEEMAMYG--GRGG 497 Query: 284 GG 279 GG Sbjct: 498 GG 499
>DDX52_HUMAN (Q9Y2R4) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) Length = 599 Score = 32.0 bits (71), Expect = 0.81 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERML 390 IGR+GR G KG AI F T +D+ +L Sbjct: 500 IGRTGRAGNKGKAITFFTEDDKPLL 524
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL-L*SCGLWRTYGKG 288 IGR+GR G G AI+F T + ++ D+ K + +P + S G +G+G Sbjct: 462 IGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFDRRSYGSHMRFGQG 521 Query: 287 GGG 279 GG Sbjct: 522 RGG 524
>ROK1_CANAL (Q9Y7C4) ATP-dependent RNA helicase CHR1 (EC 3.6.1.-)| Length = 578 Score = 31.6 bits (70), Expect = 1.1 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERML 390 IGR+GR G+ G A+ F T+ED++ + Sbjct: 466 IGRTGRGGKAGKAVTFFTKEDDKAI 490
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G G+A F E+ ++ + + +E+P+ + D + S R+ + G Sbjct: 487 IGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLKDAMMSAPGSRSNSRRG 546 Query: 284 G 282 G Sbjct: 547 G 547
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 31.6 bits (70), Expect = 1.1 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYN 366 +GR+ R GR G A + V ED L D+Q F N Sbjct: 434 VGRTARAGRTGWAYSLVRAEDAGYLLDLQLFLN 466
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQ 378 IGR+GR G+ G AI F+ ED + +D++ Sbjct: 604 IGRTGRAGKSGTAITFLGPEDTDVYYDLR 632
>DBP8_GIBZE (Q4I662) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 547 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 +GR+ R GRKG A++FV + D + I+K Sbjct: 459 VGRTARAGRKGEAVSFVGQRDVELALTIEK 488
>YR458_MIMIV (Q5UQD1) Putative ATP-dependent RNA helicase R458 (EC 3.6.1.-)| Length = 524 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 5/52 (9%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNV----VIEELPANVADLL 324 +GRSGR+GRKGV+I+ + +++ + +++ N + +LP +++ LL Sbjct: 473 VGRSGRYGRKGVSISLILVNQNKNEMEKVEQIDNCSKQSKMSQLPGDLSTLL 524
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEEL 348 IGR+GR GR G A+ FV + R+L +I+ I E+ Sbjct: 332 IGRTGRAGRSGRALLFVEPRERRLLRNIEHLMKKGINEV 370
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL-------L*SCGLWR 303 GR+GR G GVA+ FVT E E I K + +P + ++ + S Sbjct: 936 GRTGRAGNTGVAVTFVTPEQENCAPGIAKALEQSGQPIPDRLNEMRKAHREKVKSGKAKD 995 Query: 302 TYGKGGGGPDR 270 T G GG G DR Sbjct: 996 TSGFGGKGLDR 1006
>DBP5_GIBZE (Q4HY71) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFV-TREDERMLFDIQKFYNVVIEEL 348 IGR+GRFGR GV+I+FV ++ L I + Y + + +L Sbjct: 411 IGRTGRFGRVGVSISFVYDKKSFDALSKIAEMYGIDLVKL 450
>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)| Length = 444 Score = 31.2 bits (69), Expect = 1.4 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+ R GRKG AI+ V D +L + ++ + E + A V D L Sbjct: 336 IGRTARAGRKGTAISLVEAHDHLLLGKVGRY---IEEPIKARVIDEL 379
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+ R G+ GVAI+F T+ D I+ + E PA +++ Sbjct: 380 IGRTARAGKSGVAISFATQYDVEAWLRIEGALGKKLPEYPAEKDEVM 426
>ROK1_DEBHA (Q6BP45) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 550 Score = 31.2 bits (69), Expect = 1.4 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDER 396 IGR+GR G+ G A+ F T+ED++ Sbjct: 449 IGRTGRGGKAGKAVTFFTKEDDK 471
>UNG_VIBPA (Q87SC4) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 226 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 T+ + + ++ S GWE F V+E ++ QH ++F Sbjct: 124 TVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQHGVVF 161
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGGG 282 GR+GR G G A+ F+T E E I K + +P + ++ W+ K G Sbjct: 900 GRTGRAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRLNEMR---KAWKEKVKAGK 956 Query: 281 GPDRALF 261 D + F Sbjct: 957 AKDASGF 963
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR G GVA F R++ ++ + + +E+P + D L Sbjct: 490 IGRTGRAGNTGVATAFFNRDNNNIVKGLYEILEEANQEIPPFLEDCL 536
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 GR+GR G KG A F+T + R DI K + +P ++ L Sbjct: 708 GRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 GR+GR G KG A F+T + R DI K + +P ++ L Sbjct: 708 GRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 GR+GR G KG A F+T + R DI K + +P ++ L Sbjct: 708 GRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 GR+GR G KG A F+T + R DI K + +P ++ L Sbjct: 708 GRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>DBP8_CANGA (Q6FQZ0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 437 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEE 351 GR+ R GRKG AI+F+T+ D + I+ N+ + E Sbjct: 350 GRTARAGRKGDAISFITQRDVSRIEAIEARINMKMTE 386
>UNG_OCEIH (Q8EPH6) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 229 Score = 30.8 bits (68), Expect = 1.8 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +3 Query: 342 GWELFNHHVVELLDVKQHPLIF 407 GWE+F V++ L+ K HP++F Sbjct: 140 GWEVFTDKVIQTLNQKDHPVVF 161
>APTX_DROME (Q8MSG8) Protein aprataxin-like| Length = 662 Score = 30.8 bits (68), Expect = 1.8 Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 22/88 (25%) Frame = +2 Query: 170 DNDFKVEPQQTIYPLNPPSPTDKKLGDISTKTKP------------------CQDPHPPY 295 +N F+ P PP P G ++ T P C+ P+PPY Sbjct: 498 NNPFRNTPHLNRQSQKPPHPRSGPRGPMAPWTGPRFPCHQQQNRFRPPGFNACRQPYPPY 557 Query: 296 H----MFSTARTITEGQQRWLGALQSPR 367 H F A ++ GQ G Q PR Sbjct: 558 HSGHQQFPNASSVGGGQTGLPGQGQGPR 585
>ROK1_YARLI (Q6CDS6) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 547 Score = 30.8 bits (68), Expect = 1.8 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRED 402 IGR+GR GR G A+ F T+ED Sbjct: 452 IGRTGRAGRLGKAVTFFTKED 472
>ROK1_KLULA (Q6CSW1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 579 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRED 402 IGR+GR GR G AI F T++D Sbjct: 471 IGRTGRGGRSGKAITFYTKQD 491
>DDX52_RAT (Q99PT0) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) (rROK1L) Length = 598 Score = 30.4 bits (67), Expect = 2.3 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERML 390 IGR+GR G +G A+ F T +D+ +L Sbjct: 501 IGRTGRAGNRGKAVTFFTEDDKPLL 525
>DDX52_MOUSE (Q8K301) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) Length = 598 Score = 30.4 bits (67), Expect = 2.3 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERML 390 IGR+GR G +G A+ F T +D+ +L Sbjct: 501 IGRTGRAGNRGKAVTFFTEDDKPLL 525
>ROK1_YEAST (P45818) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) (Rescuer of| KEM1 protein 1) Length = 564 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRED 402 IGR+GR GR G AI F T++D Sbjct: 460 IGRTGRGGRSGKAITFYTKQD 480
>YNL6_CAEEL (P45898) Hypothetical protein R12B2.6| Length = 106 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = -2 Query: 452 GRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADL 327 GR G+ G AI F+T +D + FD+ K +V LP +V L Sbjct: 15 GRAGKHGKAITFLTPDDTAVYFDL-KQVKIVDGHLPTHVFSL 55
>SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) (SWI3-related protein) Length = 1104 Score = 30.4 bits (67), Expect = 2.3 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 6/87 (6%) Frame = +2 Query: 125 TKIPKTWLNKSQI-VHDNDFKVEPQQTIY-----PLNPPSPTDKKLGDISTKTKPCQDPH 286 T + W+N+ V +N V +Q I P+ P D+K S K KP P Sbjct: 272 TDVFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANSRKRKPSPSPP 331 Query: 287 PPYHMFSTARTITEGQQRWLGALQSPR 367 PP S ++ +GQ G +S + Sbjct: 332 PPTATESRKKSGKKGQASLYGKRRSQK 358
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 +GR+GR G KG AI FV+ + +F++ K Sbjct: 644 VGRTGRAGAKGNAITFVSSSQPKEVFNLVK 673
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G KG A + T ++ + D+ V++ E ++ L G R G+GG Sbjct: 451 IGRTGRAGTKGTAYTYFTEDNRKQARDLL----VILREAKQHIDPKLEEMGGGRG-GRGG 505 Query: 284 GG 279 G Sbjct: 506 WG 507
>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)| Length = 688 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G G+A F R + ++ ++ + +E+PA + + G G Sbjct: 541 IGRTGRAGNTGIATAFFNRGNRGVVRELLELLKEANQEVPAFLETIARESSFGGGRGGRG 600 Query: 284 GG 279 GG Sbjct: 601 GG 602
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 4/34 (11%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDER----MLFDIQK 375 +GR+GR G+ G A+ F+T E++ LFD K Sbjct: 476 VGRTGRAGKTGTALTFLTEEEDHSAMAKLFDYVK 509
>DXR_DECAR (Q47F86) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 398 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -2 Query: 410 REDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGGGGPDR 270 RE L + +N + + LPA+ A L SCG+ + GGP R Sbjct: 144 REYGATLLPVDSEHNAIFQSLPADFARGLESCGVQKILLTASGGPFR 190
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELP 345 +GR+ R GR G AI FVT+ D + Q+ +++ ++LP Sbjct: 351 VGRTARAGRSGKAITFVTQYDVEL---FQRIEHLIGKKLP 387
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELP 345 +GR+ R GR G AI FVT+ D + Q+ +++ ++LP Sbjct: 351 VGRTARAGRSGKAITFVTQYDVEL---FQRIEHLIGKKLP 387
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQ 378 +GR+ R G+ GVAI+FVT+ D + I+ Sbjct: 373 VGRTARAGKSGVAISFVTQYDVEVWLRIE 401
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 +GR+ R G+ GVAI+ VT+ D + I+ + E P +++ Sbjct: 388 VGRTARAGKSGVAISLVTQYDLEIYLRIEAALGKKLAEYPTEKEEVM 434
>UNG_BACHK (Q6HAN7) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 225 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 T+ + + + GWE F V+ELL+ ++ P+IF Sbjct: 124 TVLTVRQGEANSHKGKGWEHFTDRVIELLNEREKPVIF 161
>UNG_BACCR (Q814M9) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 225 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 T+ + + + GWE F V+ELL+ ++ P+IF Sbjct: 124 TVLTVRQGEANSHKGKGWEHFTDRVIELLNEREKPVIF 161
>UNG_BACC1 (Q72X51) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 225 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 T+ + + + GWE F V+ELL+ ++ P+IF Sbjct: 124 TVLTVRQGEANSHKGKGWEHFTDRVIELLNEREKPVIF 161
>UNG_BACAN (Q81JQ4) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 225 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 T+ + + + GWE F V+ELL+ ++ P+IF Sbjct: 124 TVLTVRQGEANSHKGKGWEHFTDRVIELLNEREKPVIF 161
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G G AI T ++++ D+ +++ + ++ YG GG Sbjct: 469 IGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEM-------TRYGGGG 521 Query: 284 G 282 G Sbjct: 522 G 522
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQ 378 +GR+ R G+ GVAI+FVT+ D + I+ Sbjct: 380 VGRTARAGKSGVAISFVTQYDVEIWLRIE 408
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 30.0 bits (66), Expect = 3.1 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERML 390 IGR+GR G+ G+A+ ++T E++ L Sbjct: 519 IGRTGRAGKTGIAVTYLTGEEDPQL 543
>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) Length = 622 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELPANVADLL*SCG 312 IGR+GR G G+A F+ + DE +L D++ +++P + L CG Sbjct: 520 IGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPGLQVL--HCG 569
>UNG_FUSNN (Q8R634) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 226 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = +3 Query: 261 KQSPVRTPTPLTICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 KQ + T LT+ + + + S +GW+ F +V++ L+ ++ P+IF Sbjct: 115 KQGVLLLNTTLTV---RDSEANSHSKIGWQTFTDNVIKSLNEREKPVIF 160
>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 675 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWRTYGKGG 285 IGR+GR G G+A F R + ++ ++ +E+PA + + R GG Sbjct: 533 IGRTGRAGNTGIATAFFNRGNRGIVRELMDLLKEANQEVPAFLETIA------RESSFGG 586 Query: 284 GG 279 GG Sbjct: 587 GG 588
>UL114_HCMVA (P16769) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 250 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +3 Query: 285 TPLTICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIFTRNKVDGHT 434 T T+ QP + ++GW+ ++HV+ L ++ L+F D HT Sbjct: 150 TVFTVVHGQPGSHR---HLGWQTLSNHVIRRLSERREHLVFMLWGADAHT 196
>TOS8_YEAST (P53147) Homeobox protein TOS8 (Target of SBF 8)| Length = 276 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = +3 Query: 267 SPVRTPTPLTICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIFTRNK 419 +PV +P+ P P RS + NH+ + +++Q+P+I+ N+ Sbjct: 59 NPVPVSSPVFFIGPSPQRS---------IQNHNAIMTQNIRQYPVIYNNNR 100
>ASPM_GORGO (P62289) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3476 Score = 29.6 bits (65), Expect = 4.0 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 8/96 (8%) Frame = +2 Query: 146 LNKSQIVHDN-DFKVEPQQTI-YPLN------PPSPTDKKLGDISTKTKPCQDPHPPYHM 301 L+ +Q + DN + QQT PL+ P SP D + ++S + CQ P + Sbjct: 391 LSPNQFLKDNMAYVCTSQQTCKVPLSNENSQVPQSPEDWRKSEVSPRIPECQGSKSPKAI 450 Query: 302 FSTARTITEGQQRWLGALQSPRCRTSGCQTASSHLH 409 F I E + + ++ + S Q SSH H Sbjct: 451 F---EEIVEMKSNYYSFIKQNNPKFSAVQDISSHSH 483
>E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related protein E74A)| Length = 873 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Frame = +2 Query: 218 PPSPTDKKLGDISTKT---KPCQDP-HPPYHMFSTARTITEGQQRWLGALQSPRCRTSGC 385 PPSP D + D+ + + +PC D M +TA T A S + Sbjct: 462 PPSPADSGVSDVDSSSSGGQPCADELKARLGMPTTAATSASAAAAAAAATHSAAAAAAAA 521 Query: 386 QTASSHLH 409 A++HLH Sbjct: 522 AAAAAHLH 529
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPAN--VADLL*SCGLWRTYGK 291 IGR+GR G G AI+F T ++ + + +E+P + V D G YG Sbjct: 449 IGRTGRAGATGTAISFFTEANKTLGAQLISIMREAKQEIPQDLLVYDRAPRGGFHPRYGG 508 Query: 290 GGG 282 GG Sbjct: 509 RGG 511
>PRP28_YEAST (P23394) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) (Helicase CA8) Length = 588 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVT-REDERMLFDIQKF 372 IGR+GR +G A++FV+ EDE ++ ++ K+ Sbjct: 525 IGRTGRAANEGTAVSFVSAAEDESLIRELYKY 556
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQK 375 IGR+GR GR G A+ FV+ + +L I+K Sbjct: 338 IGRTGRAGRSGAALIFVSPRELHLLKAIEK 367
>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) (DEAD box protein abstrakt homolog) Length = 622 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRE-DERMLFDIQKFYNVVIEELP 345 IGR+GR G G+A F+ + DE +L D++ +++P Sbjct: 520 IGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560
>ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3477 Score = 29.3 bits (64), Expect = 5.2 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 8/96 (8%) Frame = +2 Query: 146 LNKSQIVHDN-DFKVEPQQTI-YPLN------PPSPTDKKLGDISTKTKPCQDPHPPYHM 301 L+ +Q + DN + QQT PL+ P SP D + ++S + CQ P + Sbjct: 391 LSPNQFLKDNMAYMCTSQQTCKVPLSNENSQVPQSPEDWRKSEVSPRIPECQGSKSPKAI 450 Query: 302 FSTARTITEGQQRWLGALQSPRCRTSGCQTASSHLH 409 F + E + + ++ + S Q SSH H Sbjct: 451 F---EELVEMKSNYYSFIKQNNPKFSAVQDISSHSH 483
>ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associated protein| (Abnormal spindle protein homolog) (Asp homolog) Length = 3477 Score = 29.3 bits (64), Expect = 5.2 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 8/96 (8%) Frame = +2 Query: 146 LNKSQIVHDN-DFKVEPQQTI-YPLN------PPSPTDKKLGDISTKTKPCQDPHPPYHM 301 L+ +Q + DN + QQT PL+ P SP D + ++S + CQ P + Sbjct: 391 LSPNQFLKDNMAYMCTSQQTCKVPLSNENSQVPQSPEDWRKSEVSPRIPECQGSKSPKAI 450 Query: 302 FSTARTITEGQQRWLGALQSPRCRTSGCQTASSHLH 409 F + E + + ++ + S Q SSH H Sbjct: 451 F---EELVEMKSNYYSFIKQNNPKFSAVQDISSHSH 483
>UNG_XANCP (Q8P4D7) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 241 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 297 ICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 + + + R+ N GWE F HVVE L+ ++ L+F Sbjct: 131 VLTVEQGRAGAHQNKGWEGFTDHVVETLNREREGLVF 167
>UNG_XANAC (Q8PFZ6) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 241 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 297 ICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 + + + R+ N GWE F HVVE L+ ++ L+F Sbjct: 131 VLTVEQGRAGAHQNKGWEGFTDHVVETLNREREGLVF 167
>RHLB_SHEON (Q8EJQ5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 439 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYN 366 IGR+GR G KGV+++F E L I+ + N Sbjct: 344 IGRTGRAGNKGVSVSFACEEYALNLPAIETYIN 376
>RHLB_PASMU (Q9CJS1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 423 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 324 IGR+GR G GV+I+F E L I+++ + I +VA LL Sbjct: 342 IGRTGRAGESGVSISFACEEYAMNLPAIEEYISHSIPVSQYDVAALL 388
>MS116_ASHGO (Q750Q4) ATP-dependent RNA helicase MSS116, mitochondrial precursor| (EC 3.6.1.-) Length = 658 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEE 351 IGR+GR GRKG + F+ + +L +++ NVVI + Sbjct: 479 IGRTGRAGRKGSSTIFLAEHELCILDILRRKNNVVISD 516
>UNG_GEOKA (Q5KUD0) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 229 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 T+ + + ++ GWE F V+EL++ K P++F Sbjct: 123 TVLTVRRGQANSHRGKGWEYFTDRVIELVNEKDDPVVF 160
>A2MG_MOUSE (Q61838) Alpha-2-macroglobulin precursor (Alpha-2-M) [Contains:| Alpha-2-macroglobulin 165 kDa subunit; Alpha-2-macroglobulin 35 kDa subunit] Length = 1495 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -1 Query: 264 VFVEISPSFLSVGEGGFKG*MVCWGSTLKSLSWTI 160 V +EISP FL+V GG + G+ K++SW + Sbjct: 838 VDLEISPDFLAVPVGGHENSHCICGNERKTVSWAV 872
>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL*SCGLWR-TYGKG 288 IGR+GR G G+A F R ++ ++ + + + +E+P + + + T G G Sbjct: 531 IGRTGRAGNVGIATAFFNRNNKNVVKGLIELLSEANQEVPDFLTKIAREGAFGKMTRGGG 590 Query: 287 GGGPDRALFLLKYHQVSCLWGKAG 216 GG R + WG +G Sbjct: 591 RGGSSRGPSRDFRRSGNSGWGNSG 614
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTREDERML-FDIQKFYNVVIEELPANVADLL*SCGLWRTYGKG 288 IGR+GR G G A +F E +R + D+ K ++E V D L RT G G Sbjct: 577 IGRTGRVGNNGRATSFFDPEKDRAIAADLVK----ILEGSGQTVPDFL------RTCGAG 626 Query: 287 GGG 279 G G Sbjct: 627 GDG 629
>ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 481 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 Query: 464 IGRSGRFGRKGVAINFVTRED 402 IGR+GR G G A+ F T+ED Sbjct: 376 IGRTGRAGNTGQAVTFFTKED 396
>SPB4_YEAST (P25808) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-) (Suppressor| of PAB1 protein 4) Length = 606 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -2 Query: 461 GRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANV 336 GR+GR R G AI F+ E + NV +EEL V Sbjct: 359 GRTGRANRVGKAITFLNEGREEDFIPFMQVKNVELEELDLEV 400
>UNG_BLOFL (Q7VRQ7) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 221 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = +3 Query: 294 TICSPQPARSQKVSNVGWELFNHHVVELLDVKQHPLIF 407 +I + + +S+ +++GWELF V+ L+ + L+F Sbjct: 123 SILTVEQGKSRSHAHIGWELFTDKVIHTLNTYRQNLVF 160 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,474,325 Number of Sequences: 219361 Number of extensions: 1436739 Number of successful extensions: 4650 Number of sequences better than 10.0: 267 Number of HSP's better than 10.0 without gapping: 4438 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4622 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
