Clone Name | rbart43a03 |
---|---|
Clone Library Name | barley_pub |
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 aaacaaaggaagcaacaaaaa 28 ||||||||||||||||||||| Sbjct: 783646 aaacaaaggaagcaacaaaaa 783626
>gb|AC091655.15| Trypanosoma brucei chromosome 5 clone RPCI93-3C6, complete sequence Length = 158247 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 aaacaaaggaagcaacaaaaa 28 ||||||||||||||||||||| Sbjct: 113252 aaacaaaggaagcaacaaaaa 113232
>emb|AL590416.4| Human DNA sequence from clone RP11-89C21 on chromosome 10p13-14 Contains the 3' end of the gene for a protein related to the N terminus of tre (RNTRE) (KIAA0019), gene FLJ34168, a novel gene and a CpG island, complete sequence Length = 171026 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 actagttataaacaaaagaaaacaa 90 ||||||||||||||||| ||||||| Sbjct: 160636 actagttataaacaaaacaaaacaa 160660
>gb|AC011195.14| Homo sapiens chromosome 17, clone CTD-2200P10, complete sequence Length = 152574 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 aaacaaaagaaaacaagattc 95 ||||||||||||||||||||| Sbjct: 117577 aaacaaaagaaaacaagattc 117597
>ref|XM_641616.1| Dictyostelium discoideum hypothetical protein (DDB0190970), partial mRNA Length = 981 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 gaagttcaaactaaacatgg 53 |||||||||||||||||||| Sbjct: 100 gaagttcaaactaaacatgg 119
>gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064M09 map near S6115, complete sequence Length = 215240 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 actactaccctagaaactatgcct 155 |||| ||||||||||||||||||| Sbjct: 116694 actaataccctagaaactatgcct 116717
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete sequence Length = 116448 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 29292 ttataaacaaaagaaaacaa 29273
>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence Length = 239688 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 139212 ttataaacaaaagaaaacaa 139193
>gb|AY810798.1| Schistosoma japonicum SJCHGC09167 protein mRNA, partial cds Length = 1350 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tagttataaacaaaagaaaa 87 |||||||||||||||||||| Sbjct: 1106 tagttataaacaaaagaaaa 1087
>gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, complete sequence Length = 202151 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 aaacaaaagaaaacaagatt 94 |||||||||||||||||||| Sbjct: 46783 aaacaaaagaaaacaagatt 46802
>gb|AC126611.3| Mus musculus BAC clone RP23-316N22 from chromosome 14, complete sequence Length = 177469 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 tagttataaacaaaagaaaa 87 |||||||||||||||||||| Sbjct: 98438 tagttataaacaaaagaaaa 98457
>gb|AC023484.5| Homo sapiens chromosome 3 clone RP11-454F24 map 3p, complete sequence Length = 192875 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 acaaaaagtttggaagttca 41 |||||||||||||||||||| Sbjct: 102452 acaaaaagtttggaagttca 102471
>gb|AC024167.6| Homo sapiens chromosome 3 clone RP11-453F3 map 3p, complete sequence Length = 188719 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 acaaaaagtttggaagttca 41 |||||||||||||||||||| Sbjct: 34684 acaaaaagtttggaagttca 34703
>gb|AC121866.2| Mus musculus BAC clone RP24-114G1 from 8, complete sequence Length = 162835 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 aaacaaaagaaaacaagatt 94 |||||||||||||||||||| Sbjct: 92347 aaacaaaagaaaacaagatt 92366
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 caaaagaaaacaagattcta 97 |||||||||||||||||||| Sbjct: 1292398 caaaagaaaacaagattcta 1292417
>emb|AL589877.13| Human DNA sequence from clone RP11-236M5 on chromosome X Contains a suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) (ST13) pseudogene, complete sequence Length = 119032 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tataaacaaaagaaaacaag 91 |||||||||||||||||||| Sbjct: 71529 tataaacaaaagaaaacaag 71510
>emb|AL162453.18| Human DNA sequence from clone RP11-191M14 on chromosome 13, complete sequence Length = 54194 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 caacaaaaagtttggaagttcaaa 43 ||||||||| |||||||||||||| Sbjct: 35923 caacaaaaattttggaagttcaaa 35900
>emb|AL160010.14| Human DNA sequence from clone RP11-146P20 on chromosome 10 Contains part of the gene for VPS10 domain receptor protein SORCS 1, complete sequence Length = 158724 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 atgcctactcttcctaaaaa 169 |||||||||||||||||||| Sbjct: 130354 atgcctactcttcctaaaaa 130335
>emb|AL121589.17|HSJ1140M3 Human DNA sequence from clone RP5-1140M3 on chromosome 20 Contains GSSs, complete sequence Length = 15862 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 agttataaacaaaagaaaacaaga 92 |||||||||||||| ||||||||| Sbjct: 5862 agttataaacaaaataaaacaaga 5839
>gb|AC107892.9| Homo sapiens chromosome 18, clone RP11-100K18, complete sequence Length = 173744 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 25980 ttataaacaaaagaaaacaa 25999
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9 Length = 159629 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 50570 ttataaacaaaagaaaacaa 50551
>emb|AL138643.1|ATF7M19 Arabidopsis thaliana DNA chromosome 3, BAC clone F7M19 Length = 99291 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ggaagcaacaaaaagtttgg 34 |||||||||||||||||||| Sbjct: 66557 ggaagcaacaaaaagtttgg 66538
>gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, complete sequence Length = 210849 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 taaacaaaagaaaacaagattcta 97 ||||||||||||||||| |||||| Sbjct: 62061 taaacaaaagaaaacaaaattcta 62084
>gb|AC090079.6| Homo sapiens chromosome 17, clone CTD-2535P7, complete sequence Length = 200477 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 103354 ttataaacaaaagaaaacaa 103373
>gb|AC027359.7| Homo sapiens chromosome 18, clone RP11-13L18, complete sequence Length = 159043 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 47192 ttataaacaaaagaaaacaa 47211
>gb|AC084754.14| Homo sapiens 12p BAC RP11-874G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176626 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 9762 ttataaacaaaagaaaacaa 9781
>gb|AC096564.3| Homo sapiens BAC clone RP11-286E11 from 4, complete sequence Length = 163317 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 acaaaggaagcaacaaaaag 29 |||||||||||||||||||| Sbjct: 118031 acaaaggaagcaacaaaaag 118012
>gb|AC090614.5| Homo sapiens chromosome 17, clone RP11-577I13, complete sequence Length = 230956 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 64606 ttataaacaaaagaaaacaa 64625
>gb|AC154859.2| Mus musculus BAC clone RP23-14B14 from chromosome 16, complete sequence Length = 200016 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 aaacaaaagaaaacaagattctat 98 |||||||| ||||||||||||||| Sbjct: 83319 aaacaaaacaaaacaagattctat 83342
>gb|AC025040.7|AC025040 Homo sapiens chromosome 15 clone CTD-2647E9 map 15q21.1, complete sequence Length = 173394 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aagcaacaaaaagtttggaa 36 |||||||||||||||||||| Sbjct: 120419 aagcaacaaaaagtttggaa 120400
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 actactaccctagaaactatgcct 155 |||| ||||||||||||||||||| Sbjct: 12734018 actaataccctagaaactatgcct 12734041 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 aggaagcaacaaaaagttt 32 ||||||||||||||||||| Sbjct: 17655740 aggaagcaacaaaaagttt 17655758
>gb|AC140263.3| Mus musculus BAC clone RP24-299F13 from chromosome 17, complete sequence Length = 158695 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 127932 ttataaacaaaagaaaacaa 127951
>gb|AC022081.32|AC022081 Homo sapiens 12 BAC RP11-977P2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143200 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 9667 ttataaacaaaagaaaacaa 9648
>gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromosome ul, complete sequence Length = 197416 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 aaacaaaagaaaacaagatt 94 |||||||||||||||||||| Sbjct: 193405 aaacaaaagaaaacaagatt 193424
>emb|AL672090.5| Mouse DNA sequence from clone RP23-322K21 on chromosome X, complete sequence Length = 211450 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ataaacaaaagaaaacaaga 92 |||||||||||||||||||| Sbjct: 662 ataaacaaaagaaaacaaga 681
>gb|AC156581.4| Pan troglodytes BAC clone CH251-372H22 from chromosome unknown, complete sequence Length = 188418 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 aaacaaaagaaaacaagatt 94 |||||||||||||||||||| Sbjct: 90913 aaacaaaagaaaacaagatt 90932
>emb|CR394541.16| Zebrafish DNA sequence from clone DKEY-51M5 in linkage group 22, complete sequence Length = 64881 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aaacaaaggaagcaacaaaa 27 |||||||||||||||||||| Sbjct: 14268 aaacaaaggaagcaacaaaa 14287
>gb|AC109314.8| Homo sapiens chromosome 18, clone CTD-3135I6, complete sequence Length = 221501 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 103696 ttataaacaaaagaaaacaa 103715
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 actactaccctagaaactatgcct 155 |||| ||||||||||||||||||| Sbjct: 12813325 actaataccctagaaactatgcct 12813348 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 aggaagcaacaaaaagttt 32 ||||||||||||||||||| Sbjct: 17750166 aggaagcaacaaaaagttt 17750184
>gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromosome IV near 18.8 cM, complete sequence Length = 95519 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaacaa 90 |||||||||||||||||||| Sbjct: 2492 ttataaacaaaagaaaacaa 2511
>emb|AL807797.10| Mouse DNA sequence from clone RP23-417D2 on chromosome X, complete sequence Length = 157222 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ataaacaaaagaaaacaaga 92 |||||||||||||||||||| Sbjct: 156904 ataaacaaaagaaaacaaga 156923
>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete sequence Length = 250353 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 aaacaaaagaaaacaagattctat 98 |||||||| ||||||||||||||| Sbjct: 84088 aaacaaaacaaaacaagattctat 84111
>gb|AC131995.14| Mus musculus chromosome 1, clone RP24-338G10, complete sequence Length = 153731 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 79 aaaagaaaacaagattcta 97 ||||||||||||||||||| Sbjct: 11115 aaaagaaaacaagattcta 11097
>gb|AC165247.2| Mus musculus BAC clone RP24-213G21 from chromosome 13, complete sequence Length = 162597 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 aaacaaaagaaaacaagat 93 ||||||||||||||||||| Sbjct: 11779 aaacaaaagaaaacaagat 11761
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12, complete sequence Length = 147801 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 aggaagcaacaaaaagttt 32 ||||||||||||||||||| Sbjct: 65633 aggaagcaacaaaaagttt 65651
>gb|AC164101.4| Mus musculus BAC clone RP23-421F16 from chromosome 8, complete sequence Length = 218236 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aaaggaagcaacaaaaagt 30 ||||||||||||||||||| Sbjct: 129322 aaaggaagcaacaaaaagt 129340
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 ataaacaaaagaaaacaag 91 ||||||||||||||||||| Sbjct: 48199 ataaacaaaagaaaacaag 48217
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 ataaacaaaagaaaacaag 91 ||||||||||||||||||| Sbjct: 104627 ataaacaaaagaaaacaag 104645
>gb|AC146098.3| Pan troglodytes BAC clone RP43-51J12 from 7, complete sequence Length = 195811 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 agttataaacaaaagaaaa 87 ||||||||||||||||||| Sbjct: 138535 agttataaacaaaagaaaa 138517
>gb|AC163690.4| Mus musculus BAC clone RP23-470F9 from chromosome 1, complete sequence Length = 210131 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 79 aaaagaaaacaagattcta 97 ||||||||||||||||||| Sbjct: 108994 aaaagaaaacaagattcta 108976
>gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, complete sequence Length = 189787 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 tataaacaaaagaaaacaa 90 ||||||||||||||||||| Sbjct: 119586 tataaacaaaagaaaacaa 119568
>gb|AC124706.4| Mus musculus BAC clone RP24-69G17 from chromosome 5, complete sequence Length = 186703 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 tataaacaaaagaaaacaa 90 ||||||||||||||||||| Sbjct: 69898 tataaacaaaagaaaacaa 69916
>gb|AC022287.9|ATAC022287 Arabidopsis thaliana chromosome III BAC T27C4 genomic sequence, complete sequence Length = 71616 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 aacaaaagaaaacaagatt 94 ||||||||||||||||||| Sbjct: 19464 aacaaaagaaaacaagatt 19482
>gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome 2, complete sequence Length = 212563 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 actagttataaacaaaaga 84 ||||||||||||||||||| Sbjct: 90663 actagttataaacaaaaga 90645
>gb|AC122303.2| Mus musculus BAC clone RP23-279L13 from 6, complete sequence Length = 188201 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaaca 89 ||||||||||||||||||| Sbjct: 119875 ttataaacaaaagaaaaca 119893
>gb|AC096752.4| Homo sapiens BAC clone RP11-454E2 from 7, complete sequence Length = 131629 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 agttataaacaaaagaaaa 87 ||||||||||||||||||| Sbjct: 1607 agttataaacaaaagaaaa 1625
>gb|AC007093.3| Homo sapiens BAC clone RP11-233F6 from 7, complete sequence Length = 27182 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 acaaaggaagcaacaaaaa 28 ||||||||||||||||||| Sbjct: 3848 acaaaggaagcaacaaaaa 3866
>gb|AC006024.1| Homo sapiens PAC clone RP5-1166G19 from 7, complete sequence Length = 90583 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 agttataaacaaaagaaaa 87 ||||||||||||||||||| Sbjct: 394 agttataaacaaaagaaaa 376
>gb|AC109213.6| Mus musculus chromosome 16, clone RP23-345L20, complete sequence Length = 244558 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 gaagcaacaaaaagtttgg 34 ||||||||||||||||||| Sbjct: 103259 gaagcaacaaaaagtttgg 103277
>gb|AC142309.1| Pan troglodytes BAC clone RP43-45E24 from 7, complete sequence Length = 186055 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 acaaaggaagcaacaaaaa 28 ||||||||||||||||||| Sbjct: 118174 acaaaggaagcaacaaaaa 118156
>emb|CR847799.17| Zebrafish DNA sequence from clone DKEY-117P4 in linkage group 8, complete sequence Length = 128900 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 72 tataaacaaaagaaaacaagatt 94 |||||| |||||||||||||||| Sbjct: 111543 tataaaaaaaagaaaacaagatt 111565
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 aaaaagtttggaagttcaa 42 ||||||||||||||||||| Sbjct: 626116 aaaaagtttggaagttcaa 626134
>emb|AL049758.11|HSJ437M21 Human DNA sequence from clone RP3-437M21 on chromosome 22q13.2-13.33, complete sequence Length = 87402 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 atacctagttacttctctt 115 ||||||||||||||||||| Sbjct: 42060 atacctagttacttctctt 42042
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 aacaaaagaaaacaagatt 94 ||||||||||||||||||| Sbjct: 19224 aacaaaagaaaacaagatt 19206
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 aacaaaagaaaacaagatt 94 ||||||||||||||||||| Sbjct: 8589 aacaaaagaaaacaagatt 8571
>gb|AC024257.25| Homo sapiens 12 BAC RP11-370I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184125 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 aaaagtttggaagttcaaa 43 ||||||||||||||||||| Sbjct: 85423 aaaagtttggaagttcaaa 85405
>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172175 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 tataaacaaaagaaaacaa 90 ||||||||||||||||||| Sbjct: 135115 tataaacaaaagaaaacaa 135133
>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166862 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 tataaacaaaagaaaacaa 90 ||||||||||||||||||| Sbjct: 59639 tataaacaaaagaaaacaa 59621
>gb|AC009222.4| Homo sapiens chromosome 17, clone RP11-429O1, complete sequence Length = 184304 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 82 agaaaacaagattctatacctag 104 |||||||| |||||||||||||| Sbjct: 155634 agaaaacatgattctatacctag 155612
>gb|AC093863.3| Homo sapiens BAC clone RP11-552I10 from 4, complete sequence Length = 164278 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 ttataaacaaaagaaaaca 89 ||||||||||||||||||| Sbjct: 110394 ttataaacaaaagaaaaca 110412
>gb|AC026337.29| Homo sapiens 2 BAC RP11-105E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171004 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 agttataaacaaaagaaaa 87 ||||||||||||||||||| Sbjct: 42786 agttataaacaaaagaaaa 42768
>gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, complete sequence Length = 166300 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 75 aaacaaaagaaaacaagat 93 ||||||||||||||||||| Sbjct: 129534 aaacaaaagaaaacaagat 129552
>gb|AC007754.4|AC007754 Drosophila melanogaster, chromosome 3R, region 87E-87E, BAC clone BACR05K08, complete sequence Length = 188967 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 aaacaaaggaagcaacaaa 26 ||||||||||||||||||| Sbjct: 26576 aaacaaaggaagcaacaaa 26594
>emb|BX000689.17| Zebrafish DNA sequence from clone DKEY-79M5 in linkage group 8, complete sequence Length = 143526 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 72 tataaacaaaagaaaacaagatt 94 |||||| |||||||||||||||| Sbjct: 115718 tataaaaaaaagaaaacaagatt 115740
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 ataaacaaaagaaaacaag 91 ||||||||||||||||||| Sbjct: 19887786 ataaacaaaagaaaacaag 19887804
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 ataaacaaaagaaaacaag 91 ||||||||||||||||||| Sbjct: 27173231 ataaacaaaagaaaacaag 27173249 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 aaaaagtttggaagttcaa 42 ||||||||||||||||||| Sbjct: 106299 aaaaagtttggaagttcaa 106281
>gb|AF234171.2|AF234171 Mus musculus STAT5B (Stat5b) gene, complete cds Length = 71512 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 aaagaaaacaagattctat 98 ||||||||||||||||||| Sbjct: 23404 aaagaaaacaagattctat 23386
>gb|AC009211.5|AC009211 Drosophila melanogaster, chromosome 3R, region 87D11-87E3, BAC clone BACR48D15, complete sequence Length = 184272 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 aaacaaaggaagcaacaaa 26 ||||||||||||||||||| Sbjct: 172912 aaacaaaggaagcaacaaa 172930
>gb|AC007404.4| Homo sapiens BAC clone RP11-547I5 from 2, complete sequence Length = 168506 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 tttggaagttcaaactaaa 48 ||||||||||||||||||| Sbjct: 44747 tttggaagttcaaactaaa 44765
>gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 195667 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 aaagaaaacaagattctat 98 ||||||||||||||||||| Sbjct: 133539 aaagaaaacaagattctat 133521
>gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, complete sequence Length = 169991 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 agttataaacaaaagaaaa 87 ||||||||||||||||||| Sbjct: 83036 agttataaacaaaagaaaa 83018
>gb|AC010142.4|AC010142 Homo sapiens BAC clone RP11-240N18 from Y, complete sequence Length = 136462 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 72 tataaacaaaagaaaacaagatt 94 |||||||||||||||| |||||| Sbjct: 65356 tataaacaaaagaaaataagatt 65334
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 ataaacaaaagaaaacaag 91 ||||||||||||||||||| Sbjct: 55964 ataaacaaaagaaaacaag 55982
>dbj|AB007727.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC9 Length = 79590 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 agttataaacaaaagaaaa 87 ||||||||||||||||||| Sbjct: 29650 agttataaacaaaagaaaa 29632
>gb|AC151485.5| Monodelphis domestica, clone XX-214B11, complete sequence Length = 182310 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 aaaaagtttggaagttcaa 42 ||||||||||||||||||| Sbjct: 46540 aaaaagtttggaagttcaa 46522
>gb|AE003699.3| Drosophila melanogaster chromosome 3R, section 37 of 118 of the complete sequence Length = 208424 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 aaacaaaggaagcaacaaa 26 ||||||||||||||||||| Sbjct: 43162 aaacaaaggaagcaacaaa 43180
>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete sequence Length = 303191 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 tataaacaaaagaaaacaa 90 ||||||||||||||||||| Sbjct: 51026 tataaacaaaagaaaacaa 51008
>gb|AC113329.7| Mus musculus chromosome 16, clone RP23-460L9, complete sequence Length = 176766 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 tataaacaaaagaaaacaa 90 ||||||||||||||||||| Sbjct: 103873 tataaacaaaagaaaacaa 103855
>emb|CR548632.13| Zebrafish DNA sequence from clone DKEY-175H17 in linkage group 24, complete sequence Length = 178393 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 agtttggaagttcaaacta 46 ||||||||||||||||||| Sbjct: 21545 agtttggaagttcaaacta 21563
>emb|BX284683.8| Mouse DNA sequence from clone RP23-316G5 on chromosome X, complete sequence Length = 86659 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 84 aaaacaagattctatacctagttactt 110 ||||||||||| ||| ||||||||||| Sbjct: 20764 aaaacaagattgtatgcctagttactt 20790
>gb|AC002366.1|AC002366 Human Xp22 BAC CT-285I15 (from CalTech/Research Genetics) , PAC RPCI1-27C22 (from Roswell Park Cancer Center), and Cosmid U35B5 (from Lawrence Livermore), complete sequence Length = 259202 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 acaaaggaagcaacaaaaa 28 ||||||||||||||||||| Sbjct: 20641 acaaaggaagcaacaaaaa 20623
>emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chromosome 11, complete sequence Length = 239847 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 aaagaaaacaagattctat 98 ||||||||||||||||||| Sbjct: 167855 aaagaaaacaagattctat 167837
>emb|AL773566.6| Mouse DNA sequence from clone RP23-181C9 on chromosome 2, complete sequence Length = 184254 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 aaacaaaggaagcaacaaa 26 ||||||||||||||||||| Sbjct: 57535 aaacaaaggaagcaacaaa 57517
>emb|AL953900.7| Mouse DNA sequence from clone RP24-166A20 on chromosome 2, complete sequence Length = 131582 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 actagttataaacaaaaga 84 ||||||||||||||||||| Sbjct: 35223 actagttataaacaaaaga 35241
>emb|AL844577.3| Mouse DNA sequence from clone RP23-129P1 on chromosome 2, complete sequence Length = 204516 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 67 ctagttataaacaaaagaaaaca 89 |||||||||||||||| |||||| Sbjct: 17375 ctagttataaacaaaacaaaaca 17397
>emb|AL691427.15| Mouse DNA sequence from clone RP23-317I15 on chromosome 3, complete sequence Length = 213090 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 aagtttggaagttcaaact 45 ||||||||||||||||||| Sbjct: 127218 aagtttggaagttcaaact 127236
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 aaaaagtttggaagttcaa 42 ||||||||||||||||||| Sbjct: 106299 aaaaagtttggaagttcaa 106281
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 aaaaagtttggaagttcaa 42 ||||||||||||||||||| Sbjct: 115686 aaaaagtttggaagttcaa 115668 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,156,385 Number of Sequences: 3902068 Number of extensions: 2156385 Number of successful extensions: 193950 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 193072 Number of HSP's gapped (non-prelim): 878 length of query: 170 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 148 effective length of database: 17,147,199,772 effective search space: 2537785566256 effective search space used: 2537785566256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)