ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 3e-82
2dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 3e-82
3dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 3e-82
4dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 3e-82
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 234 2e-58
6gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare str... 234 2e-58
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
8dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 8e-55
9ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative... 151 2e-33
10dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
11gb|AY108108.1| Zea mays PCO072542 mRNA sequence 149 9e-33
12gb|AY108047.1| Zea mays PCO103710 mRNA sequence 131 2e-27
13gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
14gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, c... 80 7e-12
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
17gb|AF236109.1|AF236109 Phaseolus vulgaris putative purple acid p... 76 1e-10
18gb|AC008393.7| Homo sapiens chromosome 5 clone CTC-241N9, comple... 42 1.6
19gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome... 42 1.6
20gb|AF236107.1|AF236107 Ipomoea batatas putative purple acid phos... 42 1.6
21gb|AC010285.4|AC010285 Homo sapiens chromosome 5 clone CTC-563A5... 42 1.6
22gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map M... 40 6.2
23gb|AY757038.1| Macrohasseltia macroterantha trnL-trnF intergenic... 40 6.2
24gb|AY756988.1| Azara salicifolia trnL-trnF intergenic spacer, pa... 40 6.2
25gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complet... 40 6.2
26emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chr... 40 6.2
27gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, comple... 40 6.2
28gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, comp... 40 6.2
29gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8... 40 6.2
30dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.2
31emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in... 40 6.2
32emb|CT823560.2| Human DNA sequence from clone XX-HCC1954_31G13, ... 40 6.2
33gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complet... 40 6.2
34dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.2

>dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H01, full
            insert sequence
          Length = 1198

 Score =  313 bits (158), Expect = 3e-82
 Identities = 254/286 (88%)
 Strand = Plus / Minus

                                                                        
Query: 178  cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 237
            |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 1074 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1015

                                                                        
Query: 238  tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 297
            |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 1014 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 955

                                                                        
Query: 298  tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 357
            |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 954  tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 895

                                                                        
Query: 358  tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 417
             ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |
Sbjct: 894  aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 835

                                                          
Query: 418  ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
            ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 834  ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtaga 789



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>dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F06, full
            insert sequence
          Length = 1187

 Score =  313 bits (158), Expect = 3e-82
 Identities = 254/286 (88%)
 Strand = Plus / Minus

                                                                        
Query: 178  cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 237
            |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 1063 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1004

                                                                        
Query: 238  tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 297
            |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 1003 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 944

                                                                        
Query: 298  tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 357
            |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 943  tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 884

                                                                        
Query: 358  tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 417
             ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |
Sbjct: 883  aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 824

                                                          
Query: 418  ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
            ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 823  ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtaga 778



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>dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G08, full
            insert sequence
          Length = 1187

 Score =  313 bits (158), Expect = 3e-82
 Identities = 254/286 (88%)
 Strand = Plus / Minus

                                                                        
Query: 178  cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 237
            |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 1063 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1004

                                                                        
Query: 238  tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 297
            |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 1003 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 944

                                                                        
Query: 298  tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 357
            |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 943  tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 884

                                                                        
Query: 358  tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 417
             ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |
Sbjct: 883  aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 824

                                                          
Query: 418  ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
            ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 823  ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtaga 778



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>dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062L13, full
            insert sequence
          Length = 1399

 Score =  313 bits (158), Expect = 3e-82
 Identities = 254/286 (88%)
 Strand = Plus / Minus

                                                                        
Query: 178  cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 237
            |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 1088 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1029

                                                                        
Query: 238  tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 297
            |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 1028 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 969

                                                                        
Query: 298  tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 357
            |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 968  tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 909

                                                                        
Query: 358  tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 417
             ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |
Sbjct: 908  aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 849

                                                          
Query: 418  ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
            ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 848  ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtaga 803



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Minus

                                                                           
Query: 178     cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 237
               |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 7294468 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 7294409

                                                                           
Query: 238     tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 297
               |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 7294408 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 7294349

                                                                           
Query: 298     tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 357
               |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 7294348 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 7294289

                                                                         
Query: 358     tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 415
                ||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 7294288 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 7294231



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                   
Query: 412     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
               |||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7294117 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtaga 7294066



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>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060E18, from chromosome 3, complete sequence
          Length = 147983

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Minus

                                                                         
Query: 178   cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 237
             |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 45724 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 45665

                                                                         
Query: 238   tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 297
             |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 45664 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 45605

                                                                         
Query: 298   tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 357
             |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 45604 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 45545

                                                                       
Query: 358   tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 415
              ||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 45544 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 45487



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                 
Query: 412   ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
             |||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 45373 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtaga 45322



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Minus

                                                                           
Query: 178     cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 237
               |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 7292363 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 7292304

                                                                           
Query: 238     tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 297
               |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 7292303 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 7292244

                                                                           
Query: 298     tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 357
               |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 7292243 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 7292184

                                                                         
Query: 358     tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 415
                ||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 7292183 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 7292126



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                   
Query: 412     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
               |||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7292012 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtaga 7291961



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>dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043K11, full
            insert sequence
          Length = 2343

 Score =  222 bits (112), Expect = 8e-55
 Identities = 190/216 (87%)
 Strand = Plus / Plus

                                                                        
Query: 200  tggagggctggaagtggtttgttttgcgcgaggtccactcatacaagactttaccagaaa 259
            |||||||||||| || ||||| ||||| |  | ||||||  |||||||  || |||||||
Sbjct: 1633 tggagggctggaggtagtttgctttgctcttgctccacttgtacaagatgttcccagaaa 1692

                                                                        
Query: 260  catcataaaagatgaagtcagcttggtccttgtttagctggagggacatgaacccttgcc 319
            ||||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||||| |
Sbjct: 1693 catcacaaaatatgaagtcagcttggtcctggtttatctggagggacatgaacccttgtc 1752

                                                                        
Query: 320  catcataaaagaactggagcttatcatcatttggctggtagactcccctccatgcttttg 379
            |||| |||||||||||||||||||||  |||||||||  ||||||| |||||||||||||
Sbjct: 1753 catcgtaaaagaactggagcttatcagaatttggctgcaagactcctctccatgcttttg 1812

                                                
Query: 380  aaccgcctccactagtgaagtattggattggactgt 415
            |||| |||||||| |||||||||||||| |||||||
Sbjct: 1813 aaccacctccacttgtgaagtattggataggactgt 1848



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 435  caggcagtggtcatgcccattgatgtaga 463
            |||||||||||| ||||||||||||||||
Sbjct: 1870 caggcagtggtcgtgcccattgatgtaga 1898



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>ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative purple acid
           phosphatase (OSJNBa0023I19.10), mRNA
          Length = 1008

 Score =  151 bits (76), Expect = 2e-33
 Identities = 139/160 (86%)
 Strand = Plus / Minus

                                                                       
Query: 304 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 363
           |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 878 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 819

                                                                       
Query: 364 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctg 423
           || |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 818 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactgtttctgctg 759

                                                   
Query: 424 ctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
           || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 758 ctgatgtgctccaggcagtgatcatgcccattgatgtaga 719



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>dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-E10, full
           insert sequence
          Length = 1195

 Score =  151 bits (76), Expect = 2e-33
 Identities = 139/160 (86%)
 Strand = Plus / Minus

                                                                       
Query: 304 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 363
           |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 885 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 826

                                                                       
Query: 364 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctg 423
           || |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 825 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactgtttctgctg 766

                                                   
Query: 424 ctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
           || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 765 ctgatgtgctccaggcagtgatcatgcccattgatgtaga 726



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>gb|AY108108.1| Zea mays PCO072542 mRNA sequence
          Length = 1591

 Score =  149 bits (75), Expect = 9e-33
 Identities = 168/199 (84%)
 Strand = Plus / Minus

                                                                        
Query: 265  taaaagatgaagtcagcttggtccttgtttagctggagggacatgaacccttgcccatca 324
            |||||||| |||| ||| ||||| | ||| |||||||||||||||||||||||||| || 
Sbjct: 1214 taaaagataaagtgagcctggtcttggttcagctggagggacatgaacccttgcccgtcg 1155

                                                                        
Query: 325  taaaagaactggagcttatcatcatttggctggtagactcccctccatgcttttgaaccg 384
            || |||||  ||||||| || |  ||||| ||| ||||||| |||||||| || ||||||
Sbjct: 1154 tagaagaatcggagcttgtccttgtttggatggaagactcctctccatgccttggaaccg 1095

                                                                        
Query: 385  cctccactagtgaagtattggattggactgtttctgctgctaatgtgttccaggcagtgg 444
            ||||| || ||||| || |||| |||||||| ||||||||||||||| ||||| ||||| 
Sbjct: 1094 cctccgctcgtgaaatactggagtggactgtctctgctgctaatgtgctccagacagtga 1035

                               
Query: 445  tcatgcccattgatgtaga 463
            || || |||||||||||||
Sbjct: 1034 tcgtgtccattgatgtaga 1016



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>gb|AY108047.1| Zea mays PCO103710 mRNA sequence
          Length = 1513

 Score =  131 bits (66), Expect = 2e-27
 Identities = 144/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 294  tagctggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttgg 353
            |||||||||||||||||| |||||||| || || ||||||| ||| | ||| ||  | ||
Sbjct: 1039 tagctggagggacatgaagccttgcccgtcgtagaagaacttgaggtcatcttcggtggg 980

                                                                        
Query: 354  ctggtagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggact 413
             |  |  ||||| |||||||| || ||||||||||| || |||||||| |||||||| ||
Sbjct: 979  gttctgcactcctctccatgccttggaaccgcctccgcttgtgaagtactggattgggct 920

                                                              
Query: 414  gtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
            || ||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 919  gtctctgctgctgatgtgttccaggcagtggtcatgcccgttgatgtaga 870



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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                   
Query: 412     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
               |||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 1063495 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtaga 1063444



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                           
Query: 304     gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 363
               |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 1063682 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063623

                                                                  
Query: 364     cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 414
               || |||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct: 1063622 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063572



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>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence
          Length = 157450

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                 
Query: 412   ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
             |||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 60948 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtaga 60897



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                         
Query: 304   gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 363
             |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 61135 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 61076

                                                                
Query: 364   cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 414
             || |||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct: 61075 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 61025



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                   
Query: 412     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
               |||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 1063495 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtaga 1063444



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                           
Query: 304     gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 363
               |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 1063682 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063623

                                                                  
Query: 364     cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 414
               || |||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct: 1063622 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063572



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                   
Query: 412     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtaga 463
               |||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 1063492 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtaga 1063441



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                           
Query: 304     gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 363
               |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 1063679 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063620

                                                                  
Query: 364     cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 414
               || |||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct: 1063619 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063569



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>gb|AF236109.1|AF236109 Phaseolus vulgaris putative purple acid phosphatase (PAP) mRNA,
           complete cds
          Length = 996

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 368 tccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctgctaa 427
           ||||||| |||||||| || ||||| || ||| |||||||| | ||| || |||| || |
Sbjct: 805 tccatgcctttgaacctccaccactggttaagaattggatttggctgcttgtgctactta 746

                                             
Query: 428 tgtgttccaggcagtggtcatgcccattgatgta 461
           ||||||||| |||||||||||||||||| |||||
Sbjct: 745 tgtgttccaagcagtggtcatgcccattaatgta 712



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>gb|AC008393.7| Homo sapiens chromosome 5 clone CTC-241N9, complete sequence
          Length = 166847

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 12     ctcctttattggagacaattc 32
              |||||||||||||||||||||
Sbjct: 155330 ctcctttattggagacaattc 155350



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>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence
          Length = 202303

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 412   ctgtttctgctgctaatgtgttcca 436
             |||||| ||||||||||||||||||
Sbjct: 20173 ctgtttttgctgctaatgtgttcca 20149



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>gb|AF236107.1|AF236107 Ipomoea batatas putative purple acid phosphatase precursor (PAP)
           mRNA, complete cds
          Length = 939

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 304 gacatgaacccttgcccatcataaaagaa 332
           |||||||| |||||||||||||| |||||
Sbjct: 890 gacatgaatccttgcccatcatagaagaa 862



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>gb|AC010285.4|AC010285 Homo sapiens chromosome 5 clone CTC-563A5, complete sequence
          Length = 124289

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    ctcctttattggagacaattc 32
             |||||||||||||||||||||
Sbjct: 12709 ctcctttattggagacaattc 12729



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>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete
             sequence
          Length = 73587

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   cacattcaattttttcacaa 134
             ||||||||||||||||||||
Sbjct: 38746 cacattcaattttttcacaa 38727



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>gb|AY757038.1| Macrohasseltia macroterantha trnL-trnF intergenic spacer, partial
           sequence; chloroplast
          Length = 307

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 cattcaattttttcacaaat 136
           ||||||||||||||||||||
Sbjct: 60  cattcaattttttcacaaat 79



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>gb|AY756988.1| Azara salicifolia trnL-trnF intergenic spacer, partial sequence;
           chloroplast
          Length = 111

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 cattcaattttttcacaaat 136
           ||||||||||||||||||||
Sbjct: 63  cattcaattttttcacaaat 82



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>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    tgcatgtccctcattctgcagtga 193
              ||||||||||||||||||| ||||
Sbjct: 122569 tgcatgtccctcattctgctgtga 122546



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>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete
             sequence
          Length = 130718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    caattcacatccagttcaatattt 50
             ||||||||||||||| ||||||||
Sbjct: 89901 caattcacatccagtgcaatattt 89878



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>gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, complete sequence
          Length = 127953

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 189    agtgacataaatggagggctggaa 212
              ||||||| ||||||||||||||||
Sbjct: 117361 agtgacagaaatggagggctggaa 117384



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>gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, complete sequence
          Length = 217151

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 255    agaaacatcataaaagatgaagtcagct 282
              ||||||| ||||||| ||||||||||||
Sbjct: 177012 agaaacaacataaaacatgaagtcagct 177039



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>gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8, complete sequence
          Length = 186751

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    ttctgctgctaatgtgttcc 435
              ||||||||||||||||||||
Sbjct: 159102 ttctgctgctaatgtgttcc 159083



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>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete
              sequence
          Length = 190267

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    gggctggaagtggtttgttt 223
              ||||||||||||||||||||
Sbjct: 137014 gggctggaagtggtttgttt 136995



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>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22,
              complete sequence
          Length = 209223

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    atggagggctggaagtggtt 218
              ||||||||||||||||||||
Sbjct: 125635 atggagggctggaagtggtt 125616



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>emb|CT823560.2| Human DNA sequence from clone XX-HCC1954_31G13, complete sequence
          Length = 134950

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   ttctgctgctaatgtgttcc 435
             ||||||||||||||||||||
Sbjct: 83657 ttctgctgctaatgtgttcc 83638



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>gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complete sequence
          Length = 210223

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 255  agaaacatcataaaagatgaagtcagct 282
            ||||||| ||||||| ||||||||||||
Sbjct: 9356 agaaacaacataaaacatgaagtcagct 9383



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>dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1491A8
          Length = 159490

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   ttctgctgctaatgtgttcc 435
             ||||||||||||||||||||
Sbjct: 35833 ttctgctgctaatgtgttcc 35814


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,549,393
Number of Sequences: 3902068
Number of extensions: 4549393
Number of successful extensions: 88301
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88123
Number of HSP's gapped (non-prelim): 178
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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