ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC147340.2| Pan troglodytes BAC clone CH251-17L10 from Y, com... 42 0.38
2gb|AC147137.2| Pan troglodytes BAC clone CH251-346F4 from Y, com... 42 0.38
3gb|AC147658.2| Pan troglodytes BAC clone CH251-408K8 from Y, com... 42 0.38
4gb|AC144381.2| Pan troglodytes BAC clone RP43-12C6 from Y, compl... 42 0.38
5gb|AC142306.1| Pan troglodytes BAC clone RP43-131E14 from Y, com... 42 0.38
6gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 0.38
7gb|AC155935.2| Pan troglodytes BAC clone CH251-589G5 from chromo... 42 0.38
8gb|AC152420.2| Pan troglodytes BAC clone CH251-595G8 from chromo... 42 0.38
9ref|NM_019001.2| Homo sapiens 5'-3' exoribonuclease 1 (XRN1), mRNA 40 1.5
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 1.5
11emb|CR627160.1| Homo sapiens mRNA; cDNA DKFZp686G09164 (from clo... 40 1.5
12gb|AC023508.16| Homo sapiens 3 BAC RP11-18O13 (Roswell Park Canc... 40 1.5
13ref|XM_702354.1| PREDICTED: Danio rerio similar to MGC81846 prot... 40 1.5
14ref|XM_679211.1| PREDICTED: Danio rerio similar to MGC81846 prot... 40 1.5
15ref|XM_702353.1| PREDICTED: Danio rerio similar to MGC81846 prot... 40 1.5
16emb|BX294185.5| Zebrafish DNA sequence from clone CH211-232L14 i... 40 1.5
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
18gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 1.5
19emb|BX640905.1|HSM807042 Homo sapiens mRNA; cDNA DKFZp686L17106 ... 40 1.5
20emb|AL929112.6| Mouse DNA sequence from clone RP23-397G5 on chro... 40 1.5
21emb|AL133623.1|HSM801490 Homo sapiens mRNA; cDNA DKFZp434P0721 (... 40 1.5
22emb|CT025576.8| Mouse DNA sequence from clone RP23-286F8 on chro... 38 6.0
23gb|AC073958.4| Homo sapiens BAC clone RP11-533L22 from 7, comple... 38 6.0
24emb|AL161630.12| Human DNA sequence from clone RP11-500B12 on ch... 38 6.0
25gb|AC164524.5| Mus musculus BAC RP23-438F8 (Roswell Park Cancer... 38 6.0
26gb|AC093831.3| Homo sapiens BAC clone RP11-401I19 from 4, comple... 38 6.0
27gb|AC073023.7| Homo sapiens chromosome 8, clone RP11-211F2, comp... 38 6.0
28gb|AF365975.1| Rattus norvegicus alpha 1F calcium channel subuni... 38 6.0
29gb|AC106755.2| Homo sapiens chromosome 5 clone RP11-188E14, comp... 38 6.0
30emb|CR391536.1| Gallus gallus finished cDNA, clone ChEST983k15 38 6.0
31emb|BX072558.7| Zebrafish DNA sequence from clone DKEY-71K18 in ... 38 6.0
32emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 i... 38 6.0
33gb|AC104812.5| Homo sapiens BAC clone RP11-656O23 from 2, comple... 38 6.0
34gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Canc... 38 6.0
35gb|AC130404.8| Homo sapiens 12 BAC RP11-337L12 (Roswell Park Can... 38 6.0
36ref|NM_053701.1| Rattus norvegicus calcium channel, voltage-depe... 38 6.0
37ref|XM_579572.1| PREDICTED: Rattus norvegicus hypothetical gene ... 38 6.0
38emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, co... 38 6.0
39gb|AY960579.1| Homo sapiens damage-specific DNA binding protein ... 38 6.0
40emb|CR753876.17| Zebrafish DNA sequence from clone DKEYP-116A7 i... 38 6.0
41emb|BX005220.7| Zebrafish DNA sequence from clone DKEY-82D4 in l... 38 6.0
42emb|BX928749.12| Zebrafish DNA sequence from clone CH211-201A8 i... 38 6.0
43emb|AL831958.1|HSM803907 Homo sapiens mRNA; cDNA DKFZp451P0416 (... 38 6.0
44dbj|AP003695.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 38 6.0
45dbj|AP003037.2| Homo sapiens genomic DNA, chromosome 11 clone:CT... 38 6.0 
>gb|AC147340.2| Pan troglodytes BAC clone CH251-17L10 from Y, complete sequence
          Length = 164839

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 12     attaggcattatatatataaacata 36
              |||||| ||||||||||||||||||
Sbjct: 103195 attaggaattatatatataaacata 103171
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>gb|AC147137.2| Pan troglodytes BAC clone CH251-346F4 from Y, complete sequence
          Length = 130330

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 12    attaggcattatatatataaacata 36
             |||||| ||||||||||||||||||
Sbjct: 10396 attaggaattatatatataaacata 10372
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>gb|AC147658.2| Pan troglodytes BAC clone CH251-408K8 from Y, complete sequence
          Length = 190772

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 12    attaggcattatatatataaacata 36
             |||||| ||||||||||||||||||
Sbjct: 94696 attaggaattatatatataaacata 94720
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>gb|AC144381.2| Pan troglodytes BAC clone RP43-12C6 from Y, complete sequence
          Length = 190660

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 12    attaggcattatatatataaacata 36
             |||||| ||||||||||||||||||
Sbjct: 92426 attaggaattatatatataaacata 92402
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>gb|AC142306.1| Pan troglodytes BAC clone RP43-131E14 from Y, complete sequence
          Length = 159226

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 12    attaggcattatatatataaacata 36
             |||||| ||||||||||||||||||
Sbjct: 94610 attaggaattatatatataaacata 94634
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 12       attaggcattatatatataaacata 36
                |||||| ||||||||||||||||||
Sbjct: 12231051 attaggaattatatatataaacata 12231075



 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 12      attaggcattatatatataaacata 36
               |||||| ||||||||||||||||||
Sbjct: 2033059 attaggaattatatatataaacata 2033083
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>gb|AC155935.2| Pan troglodytes BAC clone CH251-589G5 from chromosome y, complete
              sequence
          Length = 201663

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 12     attaggcattatatatataaacata 36
              |||||| ||||||||||||||||||
Sbjct: 101911 attaggaattatatatataaacata 101935
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>gb|AC152420.2| Pan troglodytes BAC clone CH251-595G8 from chromosome y, complete
              sequence
          Length = 155543

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 12     attaggcattatatatataaacata 36
              |||||| ||||||||||||||||||
Sbjct: 126113 attaggaattatatatataaacata 126137
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>ref|NM_019001.2| Homo sapiens 5'-3' exoribonuclease 1 (XRN1), mRNA
          Length = 10123

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   tatatatataaacataggcc 40
            ||||||||||||||||||||
Sbjct: 6361 tatatatataaacataggcc 6342
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       gcattatatatataaacata 36
                ||||||||||||||||||||
Sbjct: 11823061 gcattatatatataaacata 11823042
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>emb|CR627160.1| Homo sapiens mRNA; cDNA DKFZp686G09164 (from clone DKFZp686G09164)
          Length = 4547

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  tatatatataaacataggcc 40
           ||||||||||||||||||||
Sbjct: 780 tatatatataaacataggcc 761
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>gb|AC023508.16| Homo sapiens 3 BAC RP11-18O13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 136105

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tatatatataaacataggcc 40
             ||||||||||||||||||||
Sbjct: 35449 tatatatataaacataggcc 35468
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>ref|XM_702354.1| PREDICTED: Danio rerio similar to MGC81846 protein, transcript
            variant 4 (LOC558716), mRNA
          Length = 2390

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   gcattatatatataaacata 36
            ||||||||||||||||||||
Sbjct: 2280 gcattatatatataaacata 2299
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>ref|XM_679211.1| PREDICTED: Danio rerio similar to MGC81846 protein, transcript
            variant 1 (LOC558716), mRNA
          Length = 2336

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   gcattatatatataaacata 36
            ||||||||||||||||||||
Sbjct: 2226 gcattatatatataaacata 2245
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>ref|XM_702353.1| PREDICTED: Danio rerio similar to MGC81846 protein, transcript
            variant 3 (LOC558716), mRNA
          Length = 2348

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   gcattatatatataaacata 36
            ||||||||||||||||||||
Sbjct: 2238 gcattatatatataaacata 2257
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>emb|BX294185.5| Zebrafish DNA sequence from clone CH211-232L14 in linkage group 24,
             complete sequence
          Length = 115427

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    gcattatatatataaacata 36
             ||||||||||||||||||||
Sbjct: 11485 gcattatatatataaacata 11466
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       gcattatatatataaacata 36
                ||||||||||||||||||||
Sbjct: 11819824 gcattatatatataaacata 11819805
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>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0035J18, from chromsome 3, complete sequence
          Length = 162711

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    gcattatatatataaacata 36
             ||||||||||||||||||||
Sbjct: 87592 gcattatatatataaacata 87611
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>emb|BX640905.1|HSM807042 Homo sapiens mRNA; cDNA DKFZp686L17106 (from clone DKFZp686L17106);
            complete cds
          Length = 10123

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   tatatatataaacataggcc 40
            ||||||||||||||||||||
Sbjct: 6361 tatatatataaacataggcc 6342
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>emb|AL929112.6| Mouse DNA sequence from clone RP23-397G5 on chromosome 4, complete
             sequence
          Length = 179785

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    gcattatatatataaacata 36
             ||||||||||||||||||||
Sbjct: 72504 gcattatatatataaacata 72485
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>emb|AL133623.1|HSM801490 Homo sapiens mRNA; cDNA DKFZp434P0721 (from clone DKFZp434P0721);
            partial cds
          Length = 8281

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   tatatatataaacataggcc 40
            ||||||||||||||||||||
Sbjct: 4654 tatatatataaacataggcc 4635
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>emb|CT025576.8| Mouse DNA sequence from clone RP23-286F8 on chromosome 16, complete
              sequence
          Length = 164971

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     attatatatataaacatag 37
              |||||||||||||||||||
Sbjct: 116700 attatatatataaacatag 116718
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>gb|AC073958.4| Homo sapiens BAC clone RP11-533L22 from 7, complete sequence
          Length = 168991

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     accacattaggcattatat 25
             |||||||||||||||||||
Sbjct: 41451 accacattaggcattatat 41433
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>emb|AL161630.12| Human DNA sequence from clone RP11-500B12 on chromosome 9 Contains a
             novel gene, a ribosomal protein L35a (RPL35A) and a CpG
             island. pseudogene, complete sequence
          Length = 200970

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 14    taggcattatatatataaacata 36
             ||||||||||||||||| |||||
Sbjct: 42090 taggcattatatatatacacata 42068
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>gb|AC164524.5| Mus musculus  BAC RP23-438F8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 180937

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     cctcccttcttggcatgca 81
              |||||||||||||||||||
Sbjct: 135426 cctcccttcttggcatgca 135408
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>gb|AC093831.3| Homo sapiens BAC clone RP11-401I19 from 4, complete sequence
          Length = 182116

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     cattatatatataaacata 36
              |||||||||||||||||||
Sbjct: 175760 cattatatatataaacata 175778
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>gb|AC073023.7| Homo sapiens chromosome 8, clone RP11-211F2, complete sequence
          Length = 171438

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     cattatatatataaacata 36
              |||||||||||||||||||
Sbjct: 112650 cattatatatataaacata 112668
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>gb|AF365975.1| Rattus norvegicus alpha 1F calcium channel subunit mRNA, complete cds
          Length = 5975

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 64   ctcccttcttggcatgcag 82
            |||||||||||||||||||
Sbjct: 2039 ctcccttcttggcatgcag 2057
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>gb|AC106755.2| Homo sapiens chromosome 5 clone RP11-188E14, complete sequence
          Length = 86871

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    attatatatataaacatag 37
             |||||||||||||||||||
Sbjct: 47951 attatatatataaacatag 47969
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>emb|CR391536.1| Gallus gallus finished cDNA, clone ChEST983k15
          Length = 1574

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 14   taggcattatatatataaacata 36
            ||||||||||||||||| |||||
Sbjct: 1396 taggcattatatatatatacata 1374
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>emb|BX072558.7| Zebrafish DNA sequence from clone DKEY-71K18 in linkage group 8,
             complete sequence
          Length = 171364

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    attatatatataaacatag 37
             |||||||||||||||||||
Sbjct: 82546 attatatatataaacatag 82564
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>emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 in linkage group 21,
              complete sequence
          Length = 181237

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     attatatatataaacatag 37
              |||||||||||||||||||
Sbjct: 146890 attatatatataaacatag 146908
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>gb|AC104812.5| Homo sapiens BAC clone RP11-656O23 from 2, complete sequence
          Length = 120574

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    tatatatataaacataggc 39
             |||||||||||||||||||
Sbjct: 87354 tatatatataaacataggc 87372
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>gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 159299

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     cctcccttcttggcatgca 81
              |||||||||||||||||||
Sbjct: 151558 cctcccttcttggcatgca 151576
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>gb|AC130404.8| Homo sapiens 12 BAC RP11-337L12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 135653

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    attaggcattatatatata 30
             |||||||||||||||||||
Sbjct: 43694 attaggcattatatatata 43676
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>ref|NM_053701.1| Rattus norvegicus calcium channel, voltage-dependent, alpha 1F
            subunit (Cacna1f), mRNA
          Length = 5975

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 64   ctcccttcttggcatgcag 82
            |||||||||||||||||||
Sbjct: 2039 ctcccttcttggcatgcag 2057
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>ref|XM_579572.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_053701
            (LOC497843), mRNA
          Length = 5972

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 64   ctcccttcttggcatgcag 82
            |||||||||||||||||||
Sbjct: 2039 ctcccttcttggcatgcag 2057
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>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence
          Length = 166110

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    attatatatataaacatag 37
             |||||||||||||||||||
Sbjct: 21044 attatatatataaacatag 21026
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>gb|AY960579.1| Homo sapiens damage-specific DNA binding protein 1, 127kDa (DDB1) gene,
             complete cds
          Length = 36817

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    cattatatatataaacata 36
             |||||||||||||||||||
Sbjct: 18276 cattatatatataaacata 18294
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>emb|CR753876.17| Zebrafish DNA sequence from clone DKEYP-116A7 in linkage group 19,
             complete sequence
          Length = 118451

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    attatatatataaacatag 37
             |||||||||||||||||||
Sbjct: 25363 attatatatataaacatag 25381
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>emb|BX005220.7| Zebrafish DNA sequence from clone DKEY-82D4 in linkage group 1, complete
              sequence
          Length = 170985

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     attatatatataaacatag 37
              |||||||||||||||||||
Sbjct: 148370 attatatatataaacatag 148388
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>emb|BX928749.12| Zebrafish DNA sequence from clone CH211-201A8 in linkage group 2,
             complete sequence
          Length = 215263

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    attaggcattatatatata 30
             |||||||||||||||||||
Sbjct: 15103 attaggcattatatatata 15085
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>emb|AL831958.1|HSM803907 Homo sapiens mRNA; cDNA DKFZp451P0416 (from clone DKFZp451P0416)
          Length = 4032

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 18   cattatatatataaacata 36
            |||||||||||||||||||
Sbjct: 1888 cattatatatataaacata 1906
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>dbj|AP003695.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1976B1, complete
             sequence
          Length = 160082

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    cattatatatataaacata 36
             |||||||||||||||||||
Sbjct: 75298 cattatatatataaacata 75316
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>dbj|AP003037.2| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2331C18, complete
             sequences
          Length = 121567

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    cattatatatataaacata 36
             |||||||||||||||||||
Sbjct: 96018 cattatatatataaacata 96000


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,526,843
Number of Sequences: 3902068
Number of extensions: 1526843
Number of successful extensions: 121065
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120790
Number of HSP's gapped (non-prelim): 275
length of query: 128
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 107
effective length of database: 17,151,101,840
effective search space: 1835167896880
effective search space used: 1835167896880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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