ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart42h09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 992 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 352 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagc 400 |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagc 709
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 352 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagc 400 |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 3455048 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagc 3455096
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 352 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagc 400 |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 71752 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagc 71800
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 352 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagc 400 |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 146602 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagc 146650
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full insert sequence Length = 1013 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 352 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagc 400 |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagc 709
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full insert sequence Length = 992 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 352 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagc 400 |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagc 709
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full insert sequence Length = 1384 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 352 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagc 400 |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1174 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagc 1126
>emb|X60432.1|ZMPRP Z.mays PRP gene Length = 1402 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 1010 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 964
>gb|AY094261.1| Zea mays cultivar C_9 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094260.1| Zea mays cultivar F_7 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094259.1| Zea mays cultivar D_9 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094258.1| Zea mays cultivar D_6 proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094257.1| Zea mays cultivar F_1 proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094256.1| Zea mays cultivar Mo17 proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094255.1| Zea mays cultivar D_7 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094254.1| Zea mays cultivar Wf9Ht proline rich protein, 3' UTR and partial cds Length = 297 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 221 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 267
>gb|AY094251.1| Zea mays cultivar B84 proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094250.1| Zea mays cultivar H60 proline rich protein, 3' UTR and partial cds Length = 303 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 227 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 273
>gb|AY094249.1| Zea mays cultivar DE811 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094248.1| Zea mays cultivar 684 proline rich protein, 3' UTR and partial cds Length = 313 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 237 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 283
>gb|AY094247.1| Zea mays cultivar D71-4HT proline rich protein, 3' UTR and partial cds Length = 307 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 231 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 277
>gb|AY094246.1| Zea mays cultivar H99 proline rich protein, 3' UTR and partial cds Length = 307 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 231 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 277
>gb|AY094245.1| Zea mays cultivar IVANA proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094244.1| Zea mays cultivar CO109 proline rich protein, 3' UTR and partial cds Length = 303 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 227 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 273
>gb|AY094243.1| Zea mays cultivar I_1 proline rich protein, 3' UTR and partial cds Length = 305 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 229 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 275
>gb|AY094242.1| Zea mays cultivar B73 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094241.1| Zea mays cultivar F_2 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094240.1| Zea mays cultivar G_1 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094239.1| Zea mays cultivar B_6 proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094238.1| Zea mays cultivar H_4 proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094237.1| Zea mays cultivar F_4 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094236.1| Zea mays cultivar F_3 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094235.1| Zea mays cultivar F_5 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094234.1| Zea mays cultivar H_5 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094233.1| Zea mays cultivar H_3 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094232.1| Zea mays cultivar J40 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094231.1| Zea mays cultivar 647 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094230.1| Zea mays cultivar B_1 proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094229.1| Zea mays cultivar F_6 proline rich protein, 3' UTR and partial cds Length = 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 284
>gb|AY094228.1| Zea mays cultivar C_5 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY094227.1| Zea mays cultivar H_1 proline rich protein, 3' UTR and partial cds Length = 315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 285
>gb|AY105001.1| Zea mays PCO123892 mRNA sequence Length = 1144 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 353 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcag 399 |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 671 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcag 625
>gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence Length = 1282 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 376 gtgcttgccgcaggtgatgagcag 399 |||||||||||||||||||||||| Sbjct: 861 gtgcttgccgcaggtgatgagcag 838
>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete sequence Length = 215366 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 316 catgcaggctaggctaggctaggc 339 |||||||||||||||||||||||| Sbjct: 139579 catgcaggctaggctaggctaggc 139602
>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence Length = 158957 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 atgttaattaattaattattcaa 118 ||||||||||||||||||||||| Sbjct: 36206 atgttaattaattaattattcaa 36228
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 372 gcgggtgcttgccgcaggtgat 393 |||||||||||||||||||||| Sbjct: 2594989 gcgggtgcttgccgcaggtgat 2595010
>emb|CR932579.1|CNS0KYB9 Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 atgtgattatcacaattgaaaattataaa 38 |||||||||||| ||||||||||| |||| Sbjct: 1216 atgtgattatcagaattgaaaattttaaa 1188
>emb|Z69380.1|SPAC4H3 S.pombe chromosome I cosmid c4H3 Length = 34635 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 gttaattaattaattattcaa 118 ||||||||||||||||||||| Sbjct: 15265 gttaattaattaattattcaa 15285
>emb|BX511175.5| Zebrafish DNA sequence from clone DKEY-197A18 in linkage group 21, complete sequence Length = 231778 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tgttaattaattaattattca 117 ||||||||||||||||||||| Sbjct: 161513 tgttaattaattaattattca 161493
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaac 119 ||||||||||||||||||||| Sbjct: 20641526 ttaattaattaattattcaac 20641546
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaac 119 ||||||||||||||||||||| Sbjct: 35137 ttaattaattaattattcaac 35157
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaac 119 ||||||||||||||||||||| Sbjct: 107184 ttaattaattaattattcaac 107204
>emb|CR396590.9| Zebrafish DNA sequence from clone CH211-238P8 in linkage group 10, complete sequence Length = 153114 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tgttaattaattaattattca 117 ||||||||||||||||||||| Sbjct: 17576 tgttaattaattaattattca 17556
>emb|AL935181.5| Zebrafish DNA sequence from clone CH211-162K9, complete sequence Length = 156592 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 catgttaattaattaattatt 115 ||||||||||||||||||||| Sbjct: 73994 catgttaattaattaattatt 74014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 catgttaattaattaattatt 115 ||||||||||||||||||||| Sbjct: 73846 catgttaattaattaattatt 73866
>emb|AL845426.9| Mouse DNA sequence from clone RP23-289M11 on chromosome 2, complete sequence Length = 181434 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 catgttaattaattaattatt 115 ||||||||||||||||||||| Sbjct: 123608 catgttaattaattaattatt 123628
>gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence Length = 186611 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tcacaattgaaaattataaa 38 |||||||||||||||||||| Sbjct: 17784 tcacaattgaaaattataaa 17765
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acatgttaattaattaatta 113 |||||||||||||||||||| Sbjct: 13834 acatgttaattaattaatta 13815
>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence Length = 210979 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggctaggctaggctaggcg 340 |||||||||||||||||||| Sbjct: 136589 aggctaggctaggctaggcg 136570
>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence Length = 170718 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggctaggctaggctaggc 339 |||||||||||||||||||| Sbjct: 59390 caggctaggctaggctaggc 59409
>gb|AC154384.2| Mus musculus BAC clone RP23-39K21 from chromosome 14, complete sequence Length = 242114 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 51375 ttaattaattaattattcaa 51394
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tcacaattgaaaattataaa 38 |||||||||||||||||||| Sbjct: 1903844 tcacaattgaaaattataaa 1903825
>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence Length = 191014 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggctaggctaggctaggc 339 |||||||||||||||||||| Sbjct: 72803 caggctaggctaggctaggc 72822
>gb|AC123860.4| Mus musculus BAC clone RP23-349N13 from chromosome 14, complete sequence Length = 191104 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 102194 atgttaattaattaattatt 102213
>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5, complete sequence Length = 135495 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 18328 atgttaattaattaattatt 18347 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 9236 atgttaattaattaattatt 9255
>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence Length = 210014 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggctaggctaggctaggc 339 |||||||||||||||||||| Sbjct: 101172 caggctaggctaggctaggc 101191
>gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, complete sequence Length = 196490 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 113292 atgttaattaattaattatt 113311
>gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, complete sequence Length = 173862 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gttaattaattaattattca 117 |||||||||||||||||||| Sbjct: 90098 gttaattaattaattattca 90117
>gb|AC164089.4| Mus musculus BAC clone RP23-70G12 from chromosome 3, complete sequence Length = 223387 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acatgttaattaattaatta 113 |||||||||||||||||||| Sbjct: 57997 acatgttaattaattaatta 57978
>gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete sequence Length = 126541 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 ttaattaattaattattcaacatc 122 ||||||||||||||||||| |||| Sbjct: 107467 ttaattaattaattattcatcatc 107444
>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence Length = 121884 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaacatc 122 ||||||||||||||||||| |||| Sbjct: 91278 ttaattaattaattattcatcatc 91301
>emb|BX640546.13| Zebrafish DNA sequence from clone CH211-152L3 in linkage group 5, complete sequence Length = 101103 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 26583 ttaattaattaattattcaa 26564
>ref|NM_004022.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant D140ab, mRNA Length = 7339 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 6557 atgttaattaattaattatt 6538
>ref|NM_004021.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp140b, mRNA Length = 7378 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 6596 atgttaattaattaattatt 6577
>ref|NM_004014.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp116, mRNA Length = 5623 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 4841 atgttaattaattaattatt 4822
>ref|NM_004023.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp140bc, mRNA Length = 7048 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 6266 atgttaattaattaattatt 6247
>ref|NM_004011.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp260-1, mRNA Length = 9773 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 8991 atgttaattaattaattatt 8972
>ref|NM_004015.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71, mRNA Length = 4623 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 3841 atgttaattaattaattatt 3822
>ref|NM_004013.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp140, mRNA Length = 7410 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 6628 atgttaattaattaattatt 6609
>ref|NM_004006.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427m, mRNA Length = 13993 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 13211 atgttaattaattaattatt 13192
>ref|NM_004012.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp260-2, mRNA Length = 9916 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 9134 atgttaattaattaattatt 9115
>ref|NM_004007.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427l, mRNA Length = 13764 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 12982 atgttaattaattaattatt 12963
>ref|NM_004009.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427p1, mRNA Length = 14000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 13218 atgttaattaattaattatt 13199
>ref|NM_004010.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427p2, mRNA Length = 14082 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 13300 atgttaattaattaattatt 13281
>ref|NM_000109.2| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427c, mRNA Length = 14069 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 13287 atgttaattaattaattatt 13268
>ref|NM_004020.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp140c, mRNA Length = 7050 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 6268 atgttaattaattaattatt 6249
>ref|NM_004016.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71b, mRNA Length = 4591 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 3809 atgttaattaattaattatt 3790
>ref|NM_004017.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71a, mRNA Length = 4584 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 3802 atgttaattaattaattatt 3783
>ref|NM_004018.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71ab, mRNA Length = 4552 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 3770 atgttaattaattaattatt 3751
>emb|AL390242.17| Human DNA sequence from clone RP11-31F15 on chromosome 1p13.1-13.3 Contains the 3' end of a novel gene, the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 68883 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 56554 atgttaattaattaattatt 56535
>emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in linkage group 21, complete sequence Length = 243457 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 45438 ttaattaattaattattcaa 45457
>gb|BC094758.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types), transcript variant Dp71b, mRNA (cDNA clone IMAGE:30336570), complete cds Length = 4621 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 3823 atgttaattaattaattatt 3804
>gb|BC028720.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types), transcript variant Dp71b, mRNA (cDNA clone IMAGE:4822807), complete cds Length = 4658 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 3860 atgttaattaattaattatt 3841
>gb|BC070078.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types), transcript variant Dp71a, mRNA (cDNA clone IMAGE:5262850), complete cds Length = 4598 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 3801 atgttaattaattaattatt 3782
>emb|AL935165.5| Zebrafish DNA sequence from clone CH211-198D18 in linkage group 4 Contains the cugbp2 gene for CUG triplet repeat, RNA binding protein 2, the 5' end of a novel gene and a CpG island, complete sequence Length = 182748 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 70232 ttaattaattaattattcaa 70251
>emb|BX248106.7| Zebrafish DNA sequence from clone CH211-123P13 in linkage group 17, complete sequence Length = 140228 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 42520 ttaattaattaattattcaa 42501
>emb|CR394567.7| Zebrafish DNA sequence from clone DKEY-88M1 in linkage group 9, complete sequence Length = 60177 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 40330 ttaattaattaattattcaa 40349
>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence Length = 70347 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaacatc 122 ||||||||||||||||||| |||| Sbjct: 49679 ttaattaattaattattcatcatc 49702
>gb|DQ397636.1| Cenarchaeum symbiosum clone C07D10, complete sequence Length = 36261 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ttgggcgggtgcttgccgca 387 |||||||||||||||||||| Sbjct: 27616 ttgggcgggtgcttgccgca 27597
>gb|DQ397625.1| Cenarchaeum symbiosum clone C20B06, complete sequence Length = 45713 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ttgggcgggtgcttgccgca 387 |||||||||||||||||||| Sbjct: 24144 ttgggcgggtgcttgccgca 24125
>emb|BX511270.9| Zebrafish DNA sequence from clone DKEY-35N12 in linkage group 14, complete sequence Length = 246102 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 169799 ttaattaattaattattcaa 169818
>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13, complete sequence Length = 193538 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 agcacatgttaattaattaattattcaa 118 ||||||| ||||||||||||||| |||| Sbjct: 79117 agcacattttaattaattaattaatcaa 79144
>tpg|BK005032.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 29 (WRKY29) gene, complete cds Length = 3368 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cacatgttaattaattaatt 112 |||||||||||||||||||| Sbjct: 2901 cacatgttaattaattaatt 2882
>gb|AE012356.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 264 of 460 of the complete genome Length = 10623 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 ttgccgcaggtgatgagcagcccg 403 |||||||||||| ||||||||||| Sbjct: 9766 ttgccgcaggtgttgagcagcccg 9743
>gb|AC006061.1| Homo sapiens X BAC GSHB-19O24 (Genome Systems Human BAC Library) complete sequence Length = 98056 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 91783 atgttaattaattaattatt 91802
>gb|AC025800.10| Homo sapiens chromosome 8, clone RP11-600N23, complete sequence Length = 185359 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atcacaattgaaaattataa 37 |||||||||||||||||||| Sbjct: 72609 atcacaattgaaaattataa 72628
>gb|AF331456.1|AF331456 Heterodera glycines chemosensory receptor gene, complete sequence Length = 7127 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 2040 ttaattaattaattattcaa 2021
>gb|AF427011.1|AF427011 Xanthomonas campestris pv. campestris GumC (gumC) gene, complete cds Length = 1419 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 ttgccgcaggtgatgagcagcccg 403 |||||||||||| ||||||||||| Sbjct: 862 ttgccgcaggtgttgagcagcccg 885
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 ggcactggaagccgttgggcgggt 377 |||||||||| ||||||||||||| Sbjct: 1223748 ggcactggaatccgttgggcgggt 1223771
>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15, complete sequence Length = 205794 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 123459 ttaattaattaattattcaa 123440
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 ttgccgcaggtgatgagcagcccg 403 |||||||||||| ||||||||||| Sbjct: 1995280 ttgccgcaggtgttgagcagcccg 1995303
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 94 acatgttaattaattaattattcaacat 121 |||||| |||||||||||| |||||||| Sbjct: 35917 acatgtaaattaattaatttttcaacat 35944
>gb|AC102189.13| Mus musculus chromosome 8, clone RP24-216J7, complete sequence Length = 136839 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 7480 atgttaattaattaattatt 7499
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggctaggctaggctaggc 339 |||||||||||||||||||| Sbjct: 22247461 caggctaggctaggctaggc 22247480
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acatgttaattaattaatta 113 |||||||||||||||||||| Sbjct: 7803121 acatgttaattaattaatta 7803140
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cacatgttaattaattaatt 112 |||||||||||||||||||| Sbjct: 630286 cacatgttaattaattaatt 630305
>emb|AL929396.18| Zebrafish DNA sequence from clone CH211-93G23 in linkage group 1, complete sequence Length = 169067 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gttaattaattaattattca 117 |||||||||||||||||||| Sbjct: 100615 gttaattaattaattattca 100634
>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete sequence Length = 70497 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaacatc 122 ||||||||||||||||||| |||| Sbjct: 49679 ttaattaattaattattcatcatc 49702
>gb|AC084653.1|CBRG45O14 Caenorhabditis briggsae cosmid G45O14, complete sequence Length = 43983 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 acatgttaattaattaattattca 117 |||| ||||||||||||||||||| Sbjct: 43689 acattttaattaattaattattca 43666
>gb|U22511.1|XCU22511 Xanthomonas campestris GumA (gumA), GumB (gumB), GumC (gumC), GumD (gumD), GumE (gumE), GumF (gumF), GumG (gumG), GumH (gumH), GumI (gumI), GumJ (gumJ), GumK (gumK), GumL (gumL), and GumM (gumM) genes, complete cds Length = 16075 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 ttgccgcaggtgatgagcagcccg 403 |||||||||||| ||||||||||| Sbjct: 2840 ttgccgcaggtgttgagcagcccg 2863
>gb|M18533.1|HUMDYS Homo sapiens dystrophin (DMD) mRNA, complete cds Length = 13957 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 13175 atgttaattaattaattatt 13156
>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_C12 Length = 114309 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cacatgttaattaattaatt 112 |||||||||||||||||||| Sbjct: 64788 cacatgttaattaattaatt 64807
>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6, complete sequence Length = 167320 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acatgttaattaattaatta 113 |||||||||||||||||||| Sbjct: 46405 acatgttaattaattaatta 46424
>dbj|AK129855.1| Homo sapiens cDNA FLJ26345 fis, clone HRT03668 Length = 2563 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 1781 atgttaattaattaattatt 1762
>gb|AC156367.3| Bos taurus clone RP42-394P24, complete sequence Length = 78774 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tcacaattgaaaattataaa 38 |||||||||||||||||||| Sbjct: 77867 tcacaattgaaaattataaa 77848
>gb|AC004998.2|AC004998 Homo sapiens PAC clone RP1-164D5 from Xq23, complete sequence Length = 135572 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acatgttaattaattaatta 113 |||||||||||||||||||| Sbjct: 98091 acatgttaattaattaatta 98110
>dbj|AK073019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150A21, full insert sequence Length = 2797 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 caggctaggctaggctaggc 339 |||||||||||||||||||| Sbjct: 508 caggctaggctaggctaggc 489
>gb|U70853.1| Caenorhabditis elegans cosmid M01H9, complete sequence Length = 30522 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggctaggctaggctaggcg 340 |||||||||||||||||||| Sbjct: 7054 aggctaggctaggctaggcg 7073
>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence Length = 176649 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 12773 atgttaattaattaattatt 12792
>emb|CR381594.6| Zebrafish DNA sequence from clone DKEY-12H3 in linkage group 19, complete sequence Length = 182645 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 30935 ttaattaattaattattcaa 30954
>emb|CR847788.7| Zebrafish DNA sequence from clone CH211-249H16 in linkage group 10, complete sequence Length = 176964 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gttaattaattaattattca 117 |||||||||||||||||||| Sbjct: 53125 gttaattaattaattattca 53106
>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete sequence Length = 254899 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggctaggctaggctaggc 339 |||||||||||||||||||| Sbjct: 136512 caggctaggctaggctaggc 136531
>gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complete sequence Length = 158922 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggctaggctaggctaggcg 340 |||||||||||||||||||| Sbjct: 93297 aggctaggctaggctaggcg 93316
>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence Length = 215708 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggctaggctaggctaggcg 340 |||||||||||||||||||| Sbjct: 12874 aggctaggctaggctaggcg 12855
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 242506 ttaattaattaattattcaa 242525
>emb|CT573090.2| RP43-052E01, complete sequence Length = 161118 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 88948 atgttaattaattaattatt 88929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acatgttaattaattaatta 113 |||||||||||||||||||| Sbjct: 7873208 acatgttaattaattaatta 7873227
>emb|AL928864.11| Zebrafish DNA sequence from clone CH211-10P21, complete sequence Length = 181508 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 58905 ttaattaattaattattcaa 58924
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggctaggctaggctaggc 339 |||||||||||||||||||| Sbjct: 117322 caggctaggctaggctaggc 117341
>gb|AC005298.1|AC005298 Drosophila melanogaster DNA sequence (P1s DS04841 (D188) and DS08189 (D218)), complete sequence Length = 95272 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggctaggctaggctaggc 339 |||||||||||||||||||| Sbjct: 35614 caggctaggctaggctaggc 35633
>emb|AL928672.14| Zebrafish DNA sequence from clone CH211-136O4, complete sequence Length = 187939 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 137803 ttaattaattaattattcaa 137784
>gb|AF052733.1|AF052733 Heterodera glycines beta-1,4-endoglucanase-1 precursor (HG-eng-1) gene, complete cds Length = 5368 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 456 ttaattaattaattattcaa 475
>emb|CT025570.7| Mouse DNA sequence from clone RP24-82O4 on chromosome 14, complete sequence Length = 232110 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 227715 atgttaattaattaattatt 227696
>emb|AL807832.6| Mouse DNA sequence from clone RP23-198D21 on chromosome 2, complete sequence Length = 192480 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 78908 ttaattaattaattattcaa 78927
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial variable region, strain 129/Sv Length = 1382053 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttaattaattaattattcaa 118 |||||||||||||||||||| Sbjct: 161665 ttaattaattaattattcaa 161646
>dbj|AB208836.1| Homo sapiens mRNA for dystrophin Dp427c isoform variant protein Length = 6801 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 atgttaattaattaattatt 115 |||||||||||||||||||| Sbjct: 6012 atgttaattaattaattatt 5993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,179,881 Number of Sequences: 3902068 Number of extensions: 3179881 Number of successful extensions: 147060 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145976 Number of HSP's gapped (non-prelim): 1034 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
